Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30111
         (716 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    26   1.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   4.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   4.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   4.1  
EF519524-1|ABP73587.1|  250|Anopheles gambiae APL2 protein.            24   5.4  
EF519520-1|ABP73583.1|  250|Anopheles gambiae APL2 protein.            24   5.4  
EF519513-1|ABP73576.1|  250|Anopheles gambiae APL2 protein.            24   5.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   5.4  

>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 78  WLHRLHWELFVFVLDFNLEKASYVIRYFSL 167
           ++H L W+L     +F+L  A    RY+SL
Sbjct: 240 FVHMLRWQLANLEFEFHLSLAERFPRYYSL 269


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 208 LFIPFAMLCLLAFSCTEISFPIIFYRPIIL 297
           LFI F  + LL F     SFP   + P  L
Sbjct: 51  LFINFIFMFLLHFVLFSFSFPFFSFAPCTL 80


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 707 RAAVSYYGDRGRWTSTITSKTLV 639
           +A + YY  + RW  T+  +T V
Sbjct: 516 QATIKYYPSKERWEMTMEDRTFV 538


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 597 PSPGRVRVFPGQLYNQGLRGDR*RP 671
           P P   R +PGQ   +GLRG+  +P
Sbjct: 476 PGPQGPRGYPGQPGPEGLRGEPGQP 500


>EF519524-1|ABP73587.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 550 DSSYTLLPEVRFPPGVQALAEYG 618
           D+SY  L  VR PP ++ L   G
Sbjct: 143 DASYNKLSVVRIPPNLRQLVAIG 165


>EF519520-1|ABP73583.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 550 DSSYTLLPEVRFPPGVQALAEYG 618
           D+SY  L  VR PP ++ L   G
Sbjct: 143 DASYNKLSVVRIPPNLRQLVAIG 165


>EF519513-1|ABP73576.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 550 DSSYTLLPEVRFPPGVQALAEYG 618
           D+SY  L  VR PP ++ L   G
Sbjct: 143 DASYNKLSVVRIPPNLRQLVAIG 165


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +1

Query: 514 CVDRYTIPYLPNDSSYTLLPEVRFPPGVQALAEYGCFPVNSTTKVFE 654
           C+DR   P         LLP+   PPG  +     C  +N+  K FE
Sbjct: 463 CLDRSCFPEQWKKQRLVLLPKPGKPPGDPSSFRPICL-LNNAGKTFE 508


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,201
Number of Sequences: 2352
Number of extensions: 12725
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)