Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30111
         (716 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.0  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   6.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.7  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    22   6.7  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -1

Query: 674 RWTSTITSKTLVVELTGKHPYSARAW 597
           +W S + S T  ++    HPY    W
Sbjct: 448 QWKSILESGTTTLQTRTMHPYDHLVW 473


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 695 SYYGDRGRWTSTITS 651
           +YYGD  +W  T++S
Sbjct: 7   NYYGDVYQWNHTVSS 21


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 252 YRNQFSNYFLQANHFITH 305
           Y+NQ +N++    H  TH
Sbjct: 115 YKNQNNNHYTSHQHLRTH 132


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +1

Query: 484  HHNVMF*CSLCVDRYTIPYLPNDSSYTLLPEVRFP 588
            +H+++    L +++ T P +P+D++   LP+   P
Sbjct: 1044 NHDILNLRPLSMEKGTRPMIPDDNTSLALPKNEGP 1078


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 475 LRQTITLLCCKTFMY 431
           L  TIT++ C+TF Y
Sbjct: 12  LSLTITIVMCQTFTY 26


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,953
Number of Sequences: 438
Number of extensions: 4060
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)