Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30109
(776 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase... 67 6e-11
BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein. 67 6e-11
BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein. 67 6e-11
AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransfera... 67 6e-11
AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransfera... 67 6e-11
AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransfera... 67 6e-11
AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransfera... 67 6e-11
AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransfera... 67 6e-11
AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransfera... 67 6e-11
X78706-1|CAA55359.1| 624|Homo sapiens carnitine acetyltransfera... 60 9e-09
BT006801-1|AAP35447.1| 544|Homo sapiens carnitine acetyltransfe... 60 9e-09
BC000723-1|AAH00723.1| 544|Homo sapiens carnitine acetyltransfe... 60 9e-09
AL158151-3|CAI12869.1| 626|Homo sapiens carnitine acetyltransfe... 60 9e-09
AL158151-1|CAO03335.1| 200|Homo sapiens carnitine acetyltransfe... 60 9e-09
U09648-1|AAB60383.1| 658|Homo sapiens carnitine palmitoyltransf... 34 0.66
U09646-1|AAB60382.1| 658|Homo sapiens carnitine palmitoyltransf... 34 0.66
M58581-1|AAB59462.1| 658|Homo sapiens carnitine palmitoyltransf... 34 0.66
AL606760-1|CAI18907.1| 658|Homo sapiens carnitine palmitoyltran... 34 0.66
BC005172-1|AAH05172.1| 658|Homo sapiens carnitine palmitoyltran... 32 2.0
BC002445-1|AAH02445.1| 658|Homo sapiens carnitine palmitoyltran... 32 2.0
AK223052-1|BAD96772.1| 577|Homo sapiens Carnitine O-palmitoyltr... 31 4.6
L39211-1|AAC41748.1| 773|Homo sapiens carnitine palmitoyltransf... 31 6.1
>S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase
protein.
Length = 748
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 FMCYGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDL--LLK 187
F CYGP+VP+GY CYNP+ + F S+F TS K+ +A+E+SL DM DL LL
Sbjct: 667 FCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDLCSLLP 726
Query: 188 VTKSK 202
T+SK
Sbjct: 727 PTESK 731
>BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 FMCYGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDL--LLK 187
F CYGP+VP+GY CYNP+ + F S+F TS K+ +A+E+SL DM DL LL
Sbjct: 549 FCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDLCSLLP 608
Query: 188 VTKSK 202
T+SK
Sbjct: 609 PTESK 613
>BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 FMCYGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDL--LLK 187
F CYGP+VP+GY CYNP+ + F S+F TS K+ +A+E+SL DM DL LL
Sbjct: 549 FCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDLCSLLP 608
Query: 188 VTKSK 202
T+SK
Sbjct: 609 PTESK 613
>AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 FMCYGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDL--LLK 187
F CYGP+VP+GY CYNP+ + F S+F TS K+ +A+E+SL DM DL LL
Sbjct: 549 FCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDLCSLLP 608
Query: 188 VTKSK 202
T+SK
Sbjct: 609 PTESK 613
>AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 FMCYGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDL--LLK 187
F CYGP+VP+GY CYNP+ + F S+F TS K+ +A+E+SL DM DL LL
Sbjct: 585 FCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDLCSLLP 644
Query: 188 VTKSK 202
T+SK
Sbjct: 645 PTESK 649
>AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 FMCYGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDL--LLK 187
F CYGP+VP+GY CYNP+ + F S+F TS K+ +A+E+SL DM DL LL
Sbjct: 667 FCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDLCSLLP 726
Query: 188 VTKSK 202
T+SK
Sbjct: 727 PTESK 731
>AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 FMCYGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDL--LLK 187
F CYGP+VP+GY CYNP+ + F S+F TS K+ +A+E+SL DM DL LL
Sbjct: 549 FCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDLCSLLP 608
Query: 188 VTKSK 202
T+SK
Sbjct: 609 PTESK 613
>AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 FMCYGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDL--LLK 187
F CYGP+VP+GY CYNP+ + F S+F TS K+ +A+E+SL DM DL LL
Sbjct: 585 FCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDLCSLLP 644
Query: 188 VTKSK 202
T+SK
Sbjct: 645 PTESK 649
>AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +2
Query: 14 FMCYGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDL--LLK 187
F CYGP+VP+GY CYNP+ + F S+F TS K+ +A+E+SL DM DL LL
Sbjct: 667 FCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDLCSLLP 726
Query: 188 VTKSK 202
T+SK
Sbjct: 727 PTESK 731
>X78706-1|CAA55359.1| 624|Homo sapiens carnitine acetyltransferase
protein.
Length = 624
Score = 60.1 bits (139), Expect = 9e-09
Identities = 28/68 (41%), Positives = 40/68 (58%)
Frame = +2
Query: 2 KCDGFMCYGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDLL 181
K D M +GP+VPDGY CYNP + +NF+ SA+ T+ + LE++L DM LL
Sbjct: 557 KTDCVMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALL 616
Query: 182 LKVTKSKL 205
++KL
Sbjct: 617 QSHPRAKL 624
>BT006801-1|AAP35447.1| 544|Homo sapiens carnitine
acetyltransferase protein.
Length = 544
Score = 60.1 bits (139), Expect = 9e-09
Identities = 28/68 (41%), Positives = 40/68 (58%)
Frame = +2
Query: 2 KCDGFMCYGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDLL 181
K D M +GP+VPDGY CYNP + +NF+ SA+ T+ + LE++L DM LL
Sbjct: 477 KTDCVMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALL 536
Query: 182 LKVTKSKL 205
++KL
Sbjct: 537 QSHPRAKL 544
>BC000723-1|AAH00723.1| 544|Homo sapiens carnitine
acetyltransferase protein.
Length = 544
Score = 60.1 bits (139), Expect = 9e-09
Identities = 28/68 (41%), Positives = 40/68 (58%)
Frame = +2
Query: 2 KCDGFMCYGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDLL 181
K D M +GP+VPDGY CYNP + +NF+ SA+ T+ + LE++L DM LL
Sbjct: 477 KTDCVMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALL 536
Query: 182 LKVTKSKL 205
++KL
Sbjct: 537 QSHPRAKL 544
>AL158151-3|CAI12869.1| 626|Homo sapiens carnitine
acetyltransferase protein.
Length = 626
Score = 60.1 bits (139), Expect = 9e-09
Identities = 28/68 (41%), Positives = 40/68 (58%)
Frame = +2
Query: 2 KCDGFMCYGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDLL 181
K D M +GP+VPDGY CYNP + +NF+ SA+ T+ + LE++L DM LL
Sbjct: 559 KTDCVMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALL 618
Query: 182 LKVTKSKL 205
++KL
Sbjct: 619 QSHPRAKL 626
>AL158151-1|CAO03335.1| 200|Homo sapiens carnitine
acetyltransferase protein.
Length = 200
Score = 60.1 bits (139), Expect = 9e-09
Identities = 28/68 (41%), Positives = 40/68 (58%)
Frame = +2
Query: 2 KCDGFMCYGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDLL 181
K D M +GP+VPDGY CYNP + +NF+ SA+ T+ + LE++L DM LL
Sbjct: 133 KTDCVMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALL 192
Query: 182 LKVTKSKL 205
++KL
Sbjct: 193 QSHPRAKL 200
>U09648-1|AAB60383.1| 658|Homo sapiens carnitine
palmitoyltransferase II precursor protein.
Length = 658
Score = 33.9 bits (74), Expect = 0.66
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 23 YGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDLL 181
+ P+V DG+ Y DN + S++ P + ++ Q +E++L+DM D L
Sbjct: 602 FAPVVSDGFGVGYAVHDNWIGCNVSSY---PGRNAREFLQCVEKALEDMFDAL 651
>U09646-1|AAB60382.1| 658|Homo sapiens carnitine
palmitoyltransferase II precursor protein.
Length = 658
Score = 33.9 bits (74), Expect = 0.66
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 23 YGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDLL 181
+ P+V DG+ Y DN + S++ P + ++ Q +E++L+DM D L
Sbjct: 602 FAPVVSDGFGVGYAVHDNWIGCNVSSY---PGRNAREFLQCVEKALEDMFDAL 651
>M58581-1|AAB59462.1| 658|Homo sapiens carnitine
palmitoyltransferase protein.
Length = 658
Score = 33.9 bits (74), Expect = 0.66
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 23 YGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDLL 181
+ P+V DG+ Y DN + S++ P + ++ Q +E++L+DM D L
Sbjct: 602 FAPVVSDGFGVGYAVHDNWIGCNVSSY---PGRNAREFLQCVEKALEDMFDAL 651
>AL606760-1|CAI18907.1| 658|Homo sapiens carnitine
palmitoyltransferase II protein.
Length = 658
Score = 33.9 bits (74), Expect = 0.66
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 23 YGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDLL 181
+ P+V DG+ Y DN + S++ P + ++ Q +E++L+DM D L
Sbjct: 602 FAPVVSDGFGVGYAVHDNWIGCNVSSY---PGRNAREFLQCVEKALEDMFDAL 651
>BC005172-1|AAH05172.1| 658|Homo sapiens carnitine
palmitoyltransferase II protein.
Length = 658
Score = 32.3 bits (70), Expect = 2.0
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +2
Query: 23 YGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDLL 181
+ P+V DG+ Y DN + S++ P + ++ Q +E++L+D+ D L
Sbjct: 602 FAPVVSDGFGVGYAVHDNWIGCNVSSY---PGRNAREFLQCVEKALEDVFDAL 651
>BC002445-1|AAH02445.1| 658|Homo sapiens carnitine
palmitoyltransferase II protein.
Length = 658
Score = 32.3 bits (70), Expect = 2.0
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +2
Query: 23 YGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDLL 181
+ P+V DG+ Y DN + S++ P + ++ Q +E++L+D+ D L
Sbjct: 602 FAPVVSDGFGVGYAVHDNWIGCNVSSY---PGRNAREFLQCVEKALEDVFDAL 651
>AK223052-1|BAD96772.1| 577|Homo sapiens Carnitine
O-palmitoyltransferase II, mitochondrial precursor
variant protein.
Length = 577
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 23 YGPLVPDGYATCYNPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDLL 181
+ P+V DG+ Y DN + S++ P + + Q +E++L+D+ D L
Sbjct: 521 FAPVVSDGFGVGYAVHDNWIGCNVSSY---PGRNARGFLQCVEKALEDVFDAL 570
>L39211-1|AAC41748.1| 773|Homo sapiens carnitine
palmitoyltransferase I protein.
Length = 773
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 23 YGPLVPDGYATCY-NPRDNDVNFATSAFVENPATSCDKYRQALEQSLQDMHDLLLKVTKS 199
+GP+ DGY Y +N +NF S+ P T ++ + L++++ D+ L + S
Sbjct: 712 FGPVADDGYGVSYILVGENLINFHISSKFSCPETDSHRFGRHLKEAMTDIITLFGLSSNS 771
Query: 200 K 202
K
Sbjct: 772 K 772
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,071,436
Number of Sequences: 237096
Number of extensions: 2146943
Number of successful extensions: 3459
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3459
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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