Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30106
         (592 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   5.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   5.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   5.9  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   5.9  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.8  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 292 HSKGHDVTVSSGVQTKRPDY 351
           H +GH++ V S    + P+Y
Sbjct: 239 HRRGHEIAVFSLTHKEDPNY 258


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 292 HSKGHDVTVSSGVQTKRPDY 351
           H +GH++ V S    + P+Y
Sbjct: 246 HRRGHEIAVFSLTHKEDPNY 265


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 198 KNRPSQSHVRKAVDVTKTRRTQLKLILP 115
           K  P  +     VDV+  RRT+L+ + P
Sbjct: 444 KTTPDNTTFITLVDVSTKRRTELEDLTP 471


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +1

Query: 184 RWPVFCSTTETRKVTSCVLG 243
           R P++   +ET+ + + V+G
Sbjct: 51  RQPIYAKISETKSIVAMVMG 70


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 73  YYHLSAFCFYCLNGWTSLQ 17
           YY ++   FY LN + S+Q
Sbjct: 113 YYPVATMSFYVLNFFGSIQ 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,625
Number of Sequences: 336
Number of extensions: 2905
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)