Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30105
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.4  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    23   2.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.1  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   4.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.4  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   7.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.5  
AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase l...    21   9.5  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/35 (22%), Positives = 19/35 (54%)
 Frame = +1

Query: 244 IDFRLGCSQEGL*DMEQKYCFDSSTANVQICSATE 348
           ID ++ C++  + + E +YC  +   N+ + +  E
Sbjct: 484 IDAKMFCNESSVSNCENEYCECTHVVNIPLGTVVE 518


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 152 IVHQYTALWLEQSCYMSDAVR 90
           + HQ   LW +Q  Y  D++R
Sbjct: 56  VTHQAYELWFKQIIYELDSIR 76


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 152 IVHQYTALWLEQSCYMSDAVR 90
           + HQ   LW +Q  Y  D++R
Sbjct: 56  VTHQAYELWFKQIIYELDSIR 76


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 152 IVHQYTALWLEQSCYMSDAVR 90
           + HQ   LW +Q  Y  D++R
Sbjct: 56  VTHQAYELWFKQIIYELDSIR 76


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = +1

Query: 460 HHIAS-ARRQHPKHRQRH 510
           HH+    + QHP+H Q H
Sbjct: 165 HHMGHHMQEQHPQHHQPH 182


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = +1

Query: 460 HHIAS-ARRQHPKHRQRH 510
           HH+    + QHP+H Q H
Sbjct: 167 HHMGHHMQEQHPQHHQPH 184


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 590 TVGSSPGN*RLQHLQQLQVAPCSYACPC 507
           + GS PG  R   L  L++    ++C C
Sbjct: 685 STGSKPGKPRSAFLTDLKLMGGKWSCDC 712


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 409 C*GRCASRNSVSGA 450
           C GRCAS   VSG+
Sbjct: 65  CIGRCASYIQVSGS 78


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 171 VVLESTYCPSIYSFVVGAELLYE 103
           VV + TYC   +  V G + LY+
Sbjct: 35  VVGDETYCDRYWECVNGQQELYD 57


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 645 SEGLIIHVFPVTSAGGNIHS 586
           SEG I+  F ++ AGG ++S
Sbjct: 200 SEGNILEEFVLSRAGGLVNS 219


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 167 FLNLHIVHQYTALWL 123
           FLN  I HQ+  +WL
Sbjct: 454 FLNDFISHQHAWIWL 468


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 167 FLNLHIVHQYTALWL 123
           FLN  I HQ+  +WL
Sbjct: 454 FLNDFISHQHAWIWL 468


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 167 FLNLHIVHQYTALWL 123
           FLN  I HQ+  +WL
Sbjct: 454 FLNDFISHQHAWIWL 468


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 167 FLNLHIVHQYTALWL 123
           FLN  I HQ+  +WL
Sbjct: 454 FLNDFISHQHAWIWL 468


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 165 LESTYCPSIYSFVVGAELLYERR 97
           LES   P +YS+  G     +RR
Sbjct: 107 LESVPFPQVYSYFAGVNPRKQRR 129


>AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase like
           protein E4 protein.
          Length = 138

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 577 DDPTVDVPASAGDRKHV 627
           +DP ++VP +AG ++ V
Sbjct: 122 EDPDLEVPGNAGLKEQV 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,160
Number of Sequences: 336
Number of extensions: 3488
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)