Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30105
(691 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 108 5e-24
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 95 4e-20
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 92 4e-19
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 78 8e-15
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_18188| Best HMM Match : SRP54 (HMM E-Value=0) 62 3e-10
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 62 3e-10
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 58 7e-09
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 57 2e-08
SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 31 1.2
SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05) 31 1.2
SB_54535| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_4444| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_19612| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_58730| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 4.7
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 29 4.7
SB_891| Best HMM Match : DUF1098 (HMM E-Value=0.47) 29 4.7
SB_27725| Best HMM Match : RVT_1 (HMM E-Value=1.9e-19) 28 8.2
SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068) 28 8.2
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 108 bits (259), Expect = 5e-24
Identities = 65/192 (33%), Positives = 103/192 (53%), Gaps = 8/192 (4%)
Frame = +2
Query: 140 IDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAY--KTWSKSTVLTR 313
I Q+ D+ I++ NPAT EVI RVP A Q E+ A+ AA++A+ WS+ + R
Sbjct: 48 IGDQWCDAADGQTIQVLNPATAEVIARVPRAGQREIDRAVMAARQAFDDSPWSRIKPVER 107
Query: 314 QQLMFKFARLLRENQSKLAAKITEEQGKTIADAEG-DVLRGIQSVEHCCSITSLQLGDSI 490
Q+L++ FA L+ +N + LA + + GK+ AE D+ + + + + G ++
Sbjct: 108 QKLLWNFADLIEKNAALLAEIESIDNGKSAVIAEHVDIRLAVDFLRYMAGFATKIEGRTV 167
Query: 491 Q---NIAKDMDTHSY--KVPLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCIIKPSEQDP 655
Q D H Y + +GVVG + A+NFP+++ W PAL TG T ++KP+E P
Sbjct: 168 QVSVPFMPDAQFHGYTRREAVGVVGAIVAWNFPLLLACWKLGPALATGCTTVLKPAEDTP 227
Query: 656 GATLMMMELLQE 691
L + EL E
Sbjct: 228 LTALKLAELALE 239
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 95.5 bits (227), Expect = 4e-20
Identities = 47/183 (25%), Positives = 92/183 (50%)
Frame = +2
Query: 137 YIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQ 316
YI G++V+ + ++ ++VIG +A + + +A+ AA + W KS + R
Sbjct: 9 YIAGEWVEGNKGSVANISPADISDVIGHYAQADKAQTEAAIAAAAAGQREWQKSGLEQRY 68
Query: 317 QLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITSLQLGDSIQN 496
++ L + +L A + E+GKT+A+ G+ R Q + + Q+G++ ++
Sbjct: 69 SVLMAIGDELIARKDELGAILAREEGKTLAEGVGETYRSGQFFHYYAAEVLRQMGETAES 128
Query: 497 IAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCIIKPSEQDPGATLMMM 676
+ ++ + + P+GVVG + +NFP W PAL GN + KP+ Q P + +
Sbjct: 129 VRPGIEIETRREPVGVVGIITPWNFPTATGAWKIAPALAFGNAIVWKPANQVPASAWALT 188
Query: 677 ELL 685
E++
Sbjct: 189 EII 191
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 91.9 bits (218), Expect = 4e-19
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 6/207 (2%)
Frame = +2
Query: 89 LVLRRSYSSSA--PTTKL-YIDGQYVDSRT---TNWIELTNPATNEVIGRVPEATQDELT 250
LV R SS A P L ++DG + T + + +T+P+T + V + + E+
Sbjct: 257 LVPRPELSSDACTPCQNLNFVDGHRCNPITEEISGQMFITDPSTGHISCEVKGSGKTEVK 316
Query: 251 SALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLR 430
A+ +A++A+KTWS + R +++ +RL+R+ + +A + GK +A DV
Sbjct: 317 RAVLSARKAFKTWSVLSGSERGRILGDASRLVRKRREDIAKVEVHDNGKPFHEALWDVDN 376
Query: 431 GIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMFPPAL 610
+E+ + G +Q + ++ + PLGVVGG+ A+N+P+ W PA+
Sbjct: 377 VADVLEYYAGVAPTLSGQHVQ-LPNGSFAYTRREPLGVVGGIGAWNYPIQTACWKIAPAI 435
Query: 611 VTGNTCIIKPSEQDPGATLMMMELLQE 691
GNT + KPS P + + ++L E
Sbjct: 436 ACGNTIVYKPSPLTPMNAVALADILTE 462
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 89.0 bits (211), Expect = 3e-18
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 3/201 (1%)
Frame = +2
Query: 98 RRSYSSSAPTTKLYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRA 277
+ +Y S +L+I+ ++VD + NP T E I + E ++++ A+ AAK A
Sbjct: 321 QHTYEGSG-AVELFINNEFVDCTSGKVFPTINPTTGEKICDISEGDKEDVDKAVKAAKEA 379
Query: 278 YK---TWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVE 448
+K W R +L++K A+L+ + + LA+ T + GK +D+ GD+
Sbjct: 380 FKLGSAWRTMDASMRGKLLYKLAQLIDRDIAYLASLETIDSGKLFSDSVGDMQSSANCFR 439
Query: 449 HCCSITSLQLGDSIQNIAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMFPPALVTGNTC 628
+ G +I ++ P+G+VG + +NFP+ + PAL GN
Sbjct: 440 YYAGWADKVTGKTIPADGPYF-VYTRHEPVGLVGAITPWNFPLNMASVKIAPALACGNVV 498
Query: 629 IIKPSEQDPGATLMMMELLQE 691
I+KP+EQ P L L++E
Sbjct: 499 ILKPAEQTPLTALYFCALVKE 519
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 77.8 bits (183), Expect = 8e-15
Identities = 51/189 (26%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Frame = +2
Query: 137 YIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQ 316
+I+G+++ +I+ +P+ EV +VP++ ++ + A+ AA A+K+WS S+ R
Sbjct: 14 FINGEFLSC--DRYIDSYDPSRGEVYCKVPDSGKEHVDLAVAAANAAFKSWSVSSPAYRA 71
Query: 317 QLMFKFARLLRENQSKLAAKITEEQGKTIADAEG-DVLRGIQSVEHCCSITSLQLG-DSI 490
+ + K A L+ + + A + +QGKT+ A D+ R ++ S ++ +G +S
Sbjct: 72 ERLRKLADLIEDRLEEFAQAESRDQGKTVNFARNVDIPRCCLNLRMFAS--AIMVGSNSR 129
Query: 491 QNIAKDMDTHSYKV--PLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCIIKPSEQDPGAT 664
N + +Y + P GV G ++ +N P+ + + PA+ +G T + KPSE
Sbjct: 130 ANFLESQAVVNYSLRSPKGVAGLISPWNLPLYLLSFKIAPAVASGCTVVCKPSEMTSVTA 189
Query: 665 LMMMELLQE 691
MM EL+ +
Sbjct: 190 WMMAELIND 198
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 70.5 bits (165), Expect = 1e-12
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Frame = +2
Query: 206 EVIGRVPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITE 385
EV+ + ++ A+ AA+ A+++WSK R + ++ AR ++++ +A +
Sbjct: 668 EVLASTTQGETQDIEDAVKAARTAFQSWSKLPGHARARHLYSIARHVQKHARLIAVLESM 727
Query: 386 EQGKTIADAEG-DVLRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKVPLGVVGGVAA 562
+ GK++ + D+ + + H L D + +K P+GVVGG+
Sbjct: 728 DNGKSVRETRDCDIPNVARHLYHHAGWAQLM----------DTEMQGWK-PVGVVGGIVP 776
Query: 563 FNFPVMIPLWMFPPALVTGNTCIIKPSEQDPGATLMMMELLQE 691
+NFP+M+ W PAL GNT ++KP+ + L+ E+ E
Sbjct: 777 WNFPLMLLCWKVCPALAMGNTVVLKPATYTRLSALLFAEICAE 819
Score = 63.3 bits (147), Expect = 2e-10
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Frame = +2
Query: 125 TTKLYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKSTV 304
T K+YI G + NP+ EVI +V + + ++ A++AA +A W K
Sbjct: 1147 TYKMYIGGAQKRPDGNYSRPILNPS-GEVIAQVADGNRKDIREAVEAAHKAASGWGKRAA 1205
Query: 305 LTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITSLQLGD 484
R Q+++ A L ++++AA+I++ G+++ + + +V IQ + + + G+
Sbjct: 1206 HNRAQIVYYLAENLEMRRAEVAARISDMTGQSLDECKAEVDASIQRLFYYGAYADKFGGN 1265
Query: 485 SIQNIAKDMDTH---------SYKV--PLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCI 631
+ + D DT + K+ P+GV+G ++ + + PA++ GNT +
Sbjct: 1266 --RPVFSDKDTKPEETPFYGATIKIHEPVGVIGIACPDECSLLAFVSLLAPAIIRGNTVV 1323
Query: 632 IKPSEQDP 655
I PSE+ P
Sbjct: 1324 IVPSEKYP 1331
>SB_18188| Best HMM Match : SRP54 (HMM E-Value=0)
Length = 410
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = +2
Query: 425 LRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKVPLGVVGGV 556
LR + VEH CSITSLQ+G+++ ++ KDMDT+SY+VPLGV G+
Sbjct: 365 LRTEEVVEHTCSITSLQMGETMPSVTKDMDTYSYRVPLGVCAGI 408
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 62.5 bits (145), Expect = 3e-10
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Frame = +2
Query: 254 ALDAAKRAYK---TWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDV 424
A+ AAK A+K W R ++K A L + LA + + GK I +A+ DV
Sbjct: 1242 AVAAAKEAFKLGSVWRTMDASARGHFLYKLADLCERDADYLARLESYDGGKVINEAKIDV 1301
Query: 425 LRGIQSVEHCCSITSLQLGDSIQNIAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMFPP 604
I + G +I T++ P+GVVG + +NFP+++ P
Sbjct: 1302 QGMIGCFRYYAGWADKVTGKTIPADGPFF-TYTRHEPVGVVGAITPWNFPLLMEGLKLAP 1360
Query: 605 ALVTGNTCIIKPSEQDPGATLMMMELLQE 691
AL G I+KP+EQ P L + L++E
Sbjct: 1361 ALACGCVVILKPAEQTPLTALYLASLVKE 1389
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 58.0 bits (134), Expect = 7e-09
Identities = 38/128 (29%), Positives = 58/128 (45%)
Frame = +2
Query: 299 TVLTRQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITSLQL 478
T R ++ K+ L+ EN +A IT E GK + +A G+VL +E
Sbjct: 3 TAKERSIILRKWYDLILENIDDIAKIITLESGKPLLEARGEVLYAANYIEFFSEEAKRVY 62
Query: 479 GDSIQNIAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCIIKPSEQDPG 658
GD I + K P+GV + +NFP+ + + A+ G T I +PS Q P
Sbjct: 63 GDIIPSNNPGQKVLITKEPVGVCASITPWNFPIAMLVRKASSAIACGCTMIARPSGQTPL 122
Query: 659 ATLMMMEL 682
+ L + EL
Sbjct: 123 SALALGEL 130
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 56.8 bits (131), Expect = 2e-08
Identities = 34/101 (33%), Positives = 58/101 (57%)
Frame = +2
Query: 89 LVLRRSYSSSAPTTKLYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAA 268
+ L RS SS K Y+ G+++D +T + NPAT E +G+V E A+ A
Sbjct: 51 MALFRSQSSLI-RHKGYVGGKWLDGDST--FPVYNPATGEELGQVANMGAKEGELAVQEA 107
Query: 269 KRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQ 391
+A++TW K+T R + + K+ +L+ ++Q++LA +T EQ
Sbjct: 108 YKAFQTWKKTTAKERSEKLRKWFQLILQHQNELAELLTTEQ 148
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 563 FNFPVMIPLWMFPPALVTGNTCIIKPSEQDPGATLMMMELLQE 691
+NFP+ + AL G T IIKPSE+ P L + +L +E
Sbjct: 149 WNFPLGMITRKAAAALAAGCTVIIKPSEETPFCALALQQLAEE 191
>SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/107 (23%), Positives = 46/107 (42%)
Frame = +2
Query: 311 RQQLMFKFARLLRENQSKLAAKITEEQGKTIADAEGDVLRGIQSVEHCCSITSLQLGDSI 490
R +++ + LRE + L ++ E GK + G++ I ++ ++ + G
Sbjct: 74 RGEVVRQIGHALREKLTPLGKLLSLEVGKIFPEGVGEIQEYIDVCDYAVGLSRMFDGKVF 133
Query: 491 QNIAKDMDTHSYKVPLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCI 631
+ P+G VG + AFNFPV + W ++ GN I
Sbjct: 134 PSERPGHALLEQWNPVGTVGVITAFNFPVAVFGWNTAISMTCGNVNI 180
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 131 KLYIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAK 271
+L+I+G++VDS NP V+ +V AT +++ A+DAAK
Sbjct: 710 QLFINGEFVDSHHGKTFNTINPTDGTVLAQVSLATHEDVDDAVDAAK 756
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 497 IAKDMDTHSYK-VPLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCIIKPSEQDPGATLMM 673
I MDT K PLGV ++A+N+PV + A+ GN ++KPSE ++
Sbjct: 59 IVNKMDTCYIKNEPLGVALIISAWNYPVQLIFLPLVGAIAGGNCAVLKPSEVASATAQLV 118
Query: 674 MELL 685
+L+
Sbjct: 119 ADLV 122
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 329 KFARLLRENQSKLAAKITEEQGKTIADAEGDVLR--GIQSVEHCCSITSLQLGDS 487
++ LREN+ KL AKI E + K + A+ ++ IQ VE S + GDS
Sbjct: 1012 EYVEELRENRRKLEAKINELEQKLASQADIIPMQPIQIQQVESVQSAPDMDFGDS 1066
>SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05)
Length = 301
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 191 NPATNEVIGRVPEATQDELTSALDAAKRAYKTWSKST 301
+PAT + +G+V + A++AA + ++TW K+T
Sbjct: 115 SPATGDELGQVSNMGAQQWELAVNAAYKEFQTWKKTT 151
>SB_54535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 137 YIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSALDAAKRAYKTWS 292
+I+G++V ++ +P T EVI P++ + +A+ AAK A W+
Sbjct: 10 FINGEFVPGEDGVYMNDLSPTTGEVICTFPDSNVVDTENAIRAAKSAGIIWA 61
>SB_4444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +1
Query: 415 GRCASRNSVSGALL*HHIASARRQHPKHRQRHGHA*LQGATWSCW---RCCSLQFP 573
GRC+SR+ S A H AS+R H + LQG W +C SL P
Sbjct: 289 GRCSSRDLSSSASSQEHFASSRVSQQSSELHHLLSSLQGVHWRTGEIPKCASLVPP 344
>SB_19612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 29.9 bits (64), Expect = 2.0
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Frame = +2
Query: 104 SYSSSAPTTKL-----YIDGQYVDSRTTNWIELTNPATNEVIGRVPEATQDELTSA---- 256
SY S P T L +DG+ DS+T W+ IGR+P++ L
Sbjct: 348 SYIVSEPNTVLEQLHSLLDGKLKDSKTKRWVVSAMGKLVAQIGRIPDSVAGALAKCRADG 407
Query: 257 -LDAAKRAYKTWSKSTV-----LT-RQQLMFKFARLL---RENQSKLAAKITEEQG 394
+D + + + +V LT +++FK AR L R+NQ+ L +T +G
Sbjct: 408 DVDLRQSVFSCFDWGSVPALPLLTFSHRVVFKTARFLFRGRKNQALLLRAMTGFEG 463
>SB_58730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1014
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +2
Query: 221 VPEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITEEQG 394
+P T+ D K T+L LMF ++ +R N ++ K+T+ G
Sbjct: 791 IPFDTERHYHPEFDGYHPGIKVKQADTILIGYPLMFNMSKQIRRNDLEMYEKVTDRNG 848
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 28.7 bits (61), Expect = 4.7
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 10/141 (7%)
Frame = +2
Query: 269 KRAYKTWSKSTVLTRQQLMFKFARLLRENQSKLAAKITE-----EQGK-TIADAEGDVLR 430
+R Y K+ L +Q+ F A+ +R N +K+A IT+ +QG T D +R
Sbjct: 1212 QRGYTFIDKALALANEQV-FTTAKGMRTNVAKVAIVITDAIQTKDQGPFTQLDRAAQPIR 1270
Query: 431 GIQSVEHCCSITSLQLGDSIQNIAKDMDT----HSYKVPLGVVGGVAAFNFPVMIPLWMF 598
+++ + I + ++ +A D S+ L V+ + + + +P+
Sbjct: 1271 RGRNI-YALEIAQILTFPDLKRMASSADNVLTAESFDDLLIVIDEIKS-KICLQVPVGTL 1328
Query: 599 PPALVTGNTCIIKPSEQDPGA 661
PP +T T P+ DP A
Sbjct: 1329 PPTTLTAPTTTQAPTTADPCA 1349
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +2
Query: 518 HSYKVPLGVVGGVAAFNFPVMIPLWMFPPALVTGNTCIIKPSEQDPGATLMMMELLQE 691
+S + LGVV + +++ + L PA+ +GN +IKPS P ++ ++L++
Sbjct: 146 YSIRHSLGVVAIITSWSQALPSILRHLVPAMASGNCVVIKPSCLAPLTVHLLAKVLKD 203
>SB_891| Best HMM Match : DUF1098 (HMM E-Value=0.47)
Length = 715
Score = 28.7 bits (61), Expect = 4.7
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Frame = +2
Query: 122 PTTKLYIDGQYVDSRTTNWIELTNPATNEV--------IGRVPEATQDEL-TSALDAAKR 274
P KL+ + + TN T+P +NE+ + ATQ +L TS A K
Sbjct: 417 PQMKLFDNSSALQENATNSQAATSPLSNELQVQQAAGSQAQQSSATQPQLETSVQPADKG 476
Query: 275 AYKTWSKSTVLTRQQLMFKFARLLRENQ-----SKLAAKITEEQGKTIADAEG 418
K S ST T Q++ L++ Q +LAA + ++ G I D G
Sbjct: 477 GTKEQSAST--TPQEMPEVLGEQLQQGQYNPGAQQLAATLPQQSGTLITDNHG 527
>SB_27725| Best HMM Match : RVT_1 (HMM E-Value=1.9e-19)
Length = 262
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 224 PEATQDELTSALDAAKRAYKTWSKSTVLTRQQLMFKFA 337
P++ + T A R+YK W S + TR+Q++ + A
Sbjct: 22 PDSGNNMSTVARAVRTRSYKCWCLSHIFTRKQVLIRTA 59
>SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068)
Length = 256
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -2
Query: 222 TLPITSLVAGLVSSIQLVVLESTYCPSIYSFVVGAELLYERRSTS 88
T PIT + L+S + L V + Y PS+YS + + + ER S S
Sbjct: 127 TSPITLV---LISRLALGVFQGIYYPSLYSLLAKSLPISERSSCS 168
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,683,221
Number of Sequences: 59808
Number of extensions: 458059
Number of successful extensions: 1260
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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