Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30103
(705 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 34 0.096
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 34 0.096
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 34 0.096
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 34 0.13
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 34 0.13
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 33 0.22
12_02_1282 + 27528159-27529148,27529549-27529614 33 0.29
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 32 0.39
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 32 0.39
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 32 0.51
01_06_1332 - 36379736-36379909,36380395-36380459,36380534-363806... 31 0.67
01_01_0100 - 755894-756662,757086-757598,758718-761050 29 3.6
03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917... 28 6.3
11_06_0339 - 22488214-22488254,22488339-22488829,22490233-224904... 28 8.3
08_02_0011 - 11234393-11235348,11235364-11235700 28 8.3
08_02_0009 + 11216532-11218687,11220727-11225998 28 8.3
08_02_0008 + 11212351-11214506,11214548-11214584 28 8.3
08_02_0007 + 11208170-11210325,11210367-11210403 28 8.3
08_02_0003 + 11180421-11180757,11180773-11185715 28 8.3
08_02_0002 + 11173365-11173512,11173528-11178470 28 8.3
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 34.3 bits (75), Expect = 0.096
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAYEL 237
+E G+ S W + K H Y V+PE V+L+ PLNP+ R T IM + +
Sbjct: 73 IEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNV 131
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 34.3 bits (75), Expect = 0.096
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAYEL 237
+E G+ S W + K H Y V+PE V+L+ PLNP+ R T IM + +
Sbjct: 73 IEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNV 131
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 34.3 bits (75), Expect = 0.096
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAYEL 237
+E G+ S W + K H Y V+PE V+L+ PLNP+ R T IM + +
Sbjct: 73 IEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNV 131
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAYEL 237
+E G+ S W + K H Y V+PE ++L+ PLNP+ R T IM + +
Sbjct: 73 IEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFSV 131
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ S W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 73 IEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAYEL 237
+E G+ S W + K H Y V+PE +L+ PLNP+ R T IM ++ +
Sbjct: 73 IEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPALLTEAPLNPKANREKMTQIMFESFNV 131
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 73 IEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 72 IEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKANREKMTQIMFETF 128
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE ++L+ PLNP+ R T IM +
Sbjct: 73 IEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ P+NP+ R T IM +
Sbjct: 72 IEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKMTQIMFETF 128
>01_06_1332 -
36379736-36379909,36380395-36380459,36380534-36380612,
36380794-36380868,36381106-36381609,36382046-36382246,
36383033-36383566
Length = 543
Score = 31.5 bits (68), Expect = 0.67
Identities = 25/101 (24%), Positives = 49/101 (48%)
Frame = +1
Query: 169 SVKPLNPREKRLPTDIMMAAYELAQLNKVKSGRSVKEVLYKNKISSKLKNEGHSNEQNVG 348
S+ LNP+ T+ MA L Q K + +K++ ++ + S + + ++Q +
Sbjct: 257 SIAALNPQLPGSSTNGPMAQMSLPQ--KQQQAAWLKQM--QSSLGSPVSPQQFQHQQRM- 311
Query: 349 FEIRGMQEKIDQATFNLKKIDQEMRHLNTLLMEQQNFFQSL 471
I +Q++ + + Q+ HLNT L++QQ+ Q L
Sbjct: 312 LLIHQLQQQSGLNQHQIAQTQQQHPHLNTQLLQQQHILQQL 352
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Frame = +1
Query: 232 ELAQLNKVKSGRSVKEVLYKN------KISSKLKNEGHSNEQNVGFEIRGMQEKIDQATF 393
ELA++ KVK + ++KN +I K ++E EQN+G + ++ +
Sbjct: 355 ELARVKKVKKNEDMAVEIFKNQETKIEQIKKKEQDEHDKEEQNLGKILSEEEQWAENEKL 414
Query: 394 NLKKIDQEMRHLNTL 438
L+ ++E+ +N +
Sbjct: 415 FLESYEEEINLINEM 429
>03_05_0697 +
26888791-26888861,26890468-26890579,26891561-26891757,
26892215-26892266,26893530-26893795,26894007-26894229,
26895154-26895327,26895408-26895485,26895566-26895817,
26896138-26898204,26899477-26901322,26901474-26901574,
26902179-26902535,26902681-26902799,26903558-26903559,
26903630-26903662,26903709-26903841,26904285-26904537,
26905688-26905912,26906401-26906466,26907373-26907471,
26908528-26908545,26908546-26908893,26909878-26910354
Length = 2522
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 379 DQATFNLKKIDQEMRHLNTLLMEQQNFFQSLFKSTELVPYKSQHASTP 522
D+ +F++ K+D + HL L N F S + VP +TP
Sbjct: 306 DKISFSVPKLDVKFTHLGEGLSVDNNIMGIHFTSAKTVPQDDLEEATP 353
>11_06_0339 -
22488214-22488254,22488339-22488829,22490233-22490405,
22492232-22492287,22492814-22492997,22494045-22494078,
22494326-22494390,22494710-22494843,22495066-22495201
Length = 437
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 82 MFSAWLPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKRLPTDI 216
M W+ C+ Y+ R S E ++I L R+ +LP D+
Sbjct: 382 MNDEWMNHCMICYIERDVFTSIEDHQIIEHYHALRTRKHKLPRDL 426
>08_02_0011 - 11234393-11235348,11235364-11235700
Length = 430
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +1
Query: 232 ELAQLNKVKSGRSVKEVLYKNKISSKLKNEGHSNEQNVGFEIRGMQEKIDQATFNLKKID 411
ELA++ KVK + ++KN+ K E EQN+G + ++ + L+ +
Sbjct: 350 ELARVKKVKKNEDMAVEIFKNQEQDKHDKE----EQNLGKILSEEEQWAENERLFLESYE 405
Query: 412 QEMRHLNTL 438
+E+ +N +
Sbjct: 406 EEINLINEM 414
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +1
Query: 232 ELAQLNKVKSGRSVKEVLYKNKISSKLKNEGHSNEQNVGFEIRGMQEKIDQATFNLKKID 411
ELA++ KVK + ++KN+ K E EQN+G + ++ + L+ +
Sbjct: 352 ELARVKKVKKNEDMAVEIFKNQEQDKHDKE----EQNLGKILSEEEQWAENERLFLESYE 407
Query: 412 QEMRHLNTL 438
+E+ +N +
Sbjct: 408 EEINLINEM 416
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +1
Query: 232 ELAQLNKVKSGRSVKEVLYKNKISSKLKNEGHSNEQNVGFEIRGMQEKIDQATFNLKKID 411
ELA++ KVK + ++KN+ K E EQN+G + ++ + L+ +
Sbjct: 1066 ELARVKKVKKNEDMAVEIFKNQEQDKHDKE----EQNLGKILSEEEQWAENERLFLESYE 1121
Query: 412 QEMRHLNTL 438
+E+ +N +
Sbjct: 1122 EEINLINEM 1130
>08_02_0008 + 11212351-11214506,11214548-11214584
Length = 730
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +1
Query: 232 ELAQLNKVKSGRSVKEVLYKNKISSKLKNEGHSNEQNVGFEIRGMQEKIDQATFNLKKID 411
ELA++ KVK + ++KN+ K E EQN+G + ++ + L+ +
Sbjct: 352 ELARVKKVKKNEDMAVEIFKNQEQDKHDKE----EQNLGKILSEEEQWAENERLFLESYE 407
Query: 412 QEMRHLNTL 438
+E+ +N +
Sbjct: 408 EEINLINEM 416
>08_02_0007 + 11208170-11210325,11210367-11210403
Length = 730
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +1
Query: 232 ELAQLNKVKSGRSVKEVLYKNKISSKLKNEGHSNEQNVGFEIRGMQEKIDQATFNLKKID 411
ELA++ KVK + ++KN+ K E EQN+G + ++ + L+ +
Sbjct: 352 ELARVKKVKKNEDMAVEIFKNQEQDKHDKE----EQNLGKILSEEEQWAENERLFLESYE 407
Query: 412 QEMRHLNTL 438
+E+ +N +
Sbjct: 408 EEINLINEM 416
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +1
Query: 232 ELAQLNKVKSGRSVKEVLYKNKISSKLKNEGHSNEQNVGFEIRGMQEKIDQATFNLKKID 411
ELA++ KVK + ++KN+ K E EQN+G + ++ + L+ +
Sbjct: 350 ELARVKKVKKNEDMAVEIFKNQEQDKHDKE----EQNLGKILSEEEQWAENERLFLESYE 405
Query: 412 QEMRHLNTL 438
+E+ +N +
Sbjct: 406 EEINLINEM 414
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +1
Query: 232 ELAQLNKVKSGRSVKEVLYKNKISSKLKNEGHSNEQNVGFEIRGMQEKIDQATFNLKKID 411
ELA++ KVK + ++KN+ K E EQN+G + ++ + L+ +
Sbjct: 287 ELARVKKVKKNEDMAVEIFKNQEQDKHDKE----EQNLGKILSEEEQWAENERLFLESYE 342
Query: 412 QEMRHLNTL 438
+E+ +N +
Sbjct: 343 EEINLINEM 351
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,732,771
Number of Sequences: 37544
Number of extensions: 348388
Number of successful extensions: 816
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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