Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30103
(705 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35985| Best HMM Match : Sushi (HMM E-Value=2.4) 33 0.23
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_56| Best HMM Match : Actin (HMM E-Value=0) 33 0.30
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 33 0.30
SB_41395| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 32 0.39
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_35915| Best HMM Match : DUF593 (HMM E-Value=0.12) 31 0.91
SB_43402| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 29 2.8
SB_56313| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-14) 29 3.7
SB_17680| Best HMM Match : bZIP_1 (HMM E-Value=8.2) 29 3.7
SB_37505| Best HMM Match : DM4_12 (HMM E-Value=5.3) 29 4.9
SB_32255| Best HMM Match : Spectrin (HMM E-Value=0.23) 28 6.4
SB_21241| Best HMM Match : ErmC (HMM E-Value=1.1) 28 6.4
SB_46461| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_8758| Best HMM Match : E-MAP-115 (HMM E-Value=0.25) 28 8.5
SB_7706| Best HMM Match : Spectrin (HMM E-Value=0) 28 8.5
>SB_35985| Best HMM Match : Sushi (HMM E-Value=2.4)
Length = 391
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -2
Query: 434 VFKCLISWSIFFKLNVAWSIFSCIPRIS 351
VF C+ SWS+F ++ WS+F+C+ R S
Sbjct: 348 VFTCVDSWSVFICVD-RWSLFTCVDRWS 374
Score = 31.5 bits (68), Expect = 0.69
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -2
Query: 518 VEACWDLYGTNSVLLKRL*KKFCCSIKRVFKCLISWSIFFKLNVAWSIFSCIPRIS 351
V C D + S + RL C VF C+ WS+F ++ WS+F+C+ R S
Sbjct: 258 VFTCEDRWSV-STCVDRLSVFTCDDRWSVFTCVDRWSVFTCVD-RWSVFTCVDRWS 311
Score = 31.1 bits (67), Expect = 0.91
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 452 CCSIKRVFKCLISWSIFFKLNVAWSIFSCIPRIS 351
C VF C+ WS+F ++ WS+F+C+ R S
Sbjct: 119 CIDHLLVFTCVDRWSVFTCVD-RWSVFTCVDRWS 151
Score = 31.1 bits (67), Expect = 0.91
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 434 VFKCLISWSIFFKLNVAWSIFSCIPRIS 351
VF C+ WS+F ++ WS+F+C+ R S
Sbjct: 213 VFTCIDHWSVFTCVD-RWSVFTCVDRWS 239
Score = 31.1 bits (67), Expect = 0.91
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 452 CCSIKRVFKCLISWSIFFKLNVAWSIFSCIPRIS 351
C VF C+ WS+F ++ WS+F+C+ R S
Sbjct: 225 CVDRWSVFTCVDRWSVFTCVH-RWSVFTCVDRWS 257
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 452 CCSIKRVFKCLISWSIFFKLNVAWSIFSCIPRIS 351
C VF C+ WS+F ++ WS+F+C+ R S
Sbjct: 351 CVDSWSVFICVDRWSLFTCVD-RWSVFTCVDRWS 383
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 452 CCSIKRVFKCLISWSIFFKLNVAWSIFSCIPRIS 351
C +F C+ WS+F ++ WS+F+C+ R S
Sbjct: 83 CVDRWSLFTCVDRWSVFTCVD-RWSVFTCVDRWS 115
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 452 CCSIKRVFKCLISWSIFFKLNVAWSIFSCIPRIS 351
C VF C+ WS+F ++ WS+F+C+ R S
Sbjct: 306 CVDRWSVFICVDRWSLFTCVD-RWSVFTCVDRWS 338
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 434 VFKCLISWSIFFKLNVAWSIFSCIPRIS 351
VF C+ WS+F ++ WS+F+C+ R S
Sbjct: 80 VFICVDRWSLFTCVD-RWSVFTCVDRWS 106
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 452 CCSIKRVFKCLISWSIFFKLNVAWSIFSCIPRIS 351
C +F C+ WS+F ++ WS+F+C+ R S
Sbjct: 315 CVDRWSLFTCVDRWSVFTCVD-RWSVFTCVHRWS 347
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 452 CCSIKRVFKCLISWSIFFKLNVAWSIFSCIPR 357
C +F C+ WS+F ++ WS+F+C+ R
Sbjct: 360 CVDRWSLFTCVDRWSVFTCVD-RWSVFTCVDR 390
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 452 CCSIKRVFKCLISWSIFFKLNVAWSIFSCIPRIS 351
C VF C+ W +F ++ WS+F+C+ R S
Sbjct: 198 CVDRWSVFTCVDRWLVFTCID-HWSVFTCVDRWS 230
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 71 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 71 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
>SB_41395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 32.7 bits (71), Expect = 0.30
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +1
Query: 139 VSPEAGKVILSVKPLNPREKRLPTDIMMAAYELAQLNKVKSGRSVKEVLYKNKISSKLKN 318
+SP+ ++ L KP+N E RLP +IM+ +K K G+ ++ Y N +S L
Sbjct: 117 ISPKPDEMELKTKPINVEELRLP-EIMVPV-----AHKGKQGKGRRDE-YDNYMSYLLDA 169
Query: 319 EGHSNEQNVGFEIRGMQEKIDQA-TFNLKKIDQEMRHLNT 435
+ S + + + + + DQA T LKK + ++ L T
Sbjct: 170 QRPSQHRMLYHHLESLTQ--DQATTAELKKEQERVKRLET 207
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 32.3 bits (70), Expect = 0.39
Identities = 29/130 (22%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Frame = +1
Query: 157 KVILSVKPLNPREKRLPTDIMMAAYELAQLNKVKSGRSVKEVLYKNKIS--SKLKNEGHS 330
+V L K +N E+ + ++AQL ++++ SVK YK I+ + K++ +
Sbjct: 283 RVCLQYKRINRLEETRHQEKAEMELKMAQLKEIENEYSVKADQYKQHIADLEEEKDQLQN 342
Query: 331 NEQNVGFEIRGMQEKIDQATFNLKKIDQEMRHLNTLLMEQQNFFQSLFKSTELVPYKSQH 510
+ E+R + ++ A ++ ++ HL L E+++ + + S++ S +
Sbjct: 343 ELDSQTEELRQVSLCLEDAMKRTYELKSQIAHLQDNLKEKESLL-TCYNSSKSDSGPSSY 401
Query: 511 ASTPV-YSDS 537
S+PV +SD+
Sbjct: 402 YSSPVDHSDA 411
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 337 QNVGFEIRGMQEKIDQATFNLKKIDQEMRHLNTLLMEQQNFFQSLFKSTELVPYKSQHA 513
Q + + QEK+D +++KID E+R L+T Q F L K + V + H+
Sbjct: 766 QKLAEAVFNFQEKVDDLLSSVEKIDIEVRSLDTCSYNNQTFRDVLGKIQKAVDELNLHS 824
>SB_35915| Best HMM Match : DUF593 (HMM E-Value=0.12)
Length = 371
Score = 31.1 bits (67), Expect = 0.91
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +1
Query: 169 SVKPLNPREKRLPTDIMMAAYELAQLNKVKSG--RSVKEVLYKNKISSKLKNEGHSNEQN 342
S K L + L D + E+A L K + +K N+I++K + +
Sbjct: 148 STKDLETEIEALRRDTCLKEAEVADLQSEKDEVLKQLKVARGVNEINNKKLSALEQKLLS 207
Query: 343 VGFEIRGMQEKIDQATFNLKKIDQEMRHLNTLLMEQQN 456
E+RGM++K + +K++ E R L L E ++
Sbjct: 208 KNEELRGMEDKGQISAGEIKRLQSEKRELEMQLKEAED 245
>SB_43402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 358 RGMQEKIDQATFNLKKIDQEMRHLNTLLMEQQNFFQSL 471
R QE++DQ T +K ID++M + ++ E Q + +L
Sbjct: 182 RHKQEQLDQLTQEIKLIDEDMVKVKDMIEEHQRQYSAL 219
>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
Length = 847
Score = 29.5 bits (63), Expect = 2.8
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = +1
Query: 211 DIMMAAYELAQLNKVKSGRSVK-EVLYKN--KISSKLKNEGHSNEQNVGFEIRGMQEKID 381
++ + L Q+ K K R + E Y SSKL+ EG ++ +I G+Q++++
Sbjct: 577 EVARESRRLTQILKTKDARLTQIENTYHELESKSSKLEKEGTEKDE----KIEGLQKRLE 632
Query: 382 QATFNL-KKIDQEMRHLNTLLMEQQNFFQSLFKSTE 486
+ T NL K+DQ +R + + QS K E
Sbjct: 633 E-TLNLNNKLDQSVRKKEENIRTLEKTLQSNEKREE 667
>SB_56313| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-14)
Length = 910
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 499 KSQHASTPVYSDSPIIFGNNT*LLCNCLVYSYYFNQGIMWFGGC 630
K + A T +Y + PI G + L L+Y ++ N I +G C
Sbjct: 701 KRKQAKTKLYLNRPIYVGFSILDLSKVLMYDFHHNHMIARYGSC 744
>SB_17680| Best HMM Match : bZIP_1 (HMM E-Value=8.2)
Length = 92
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/42 (23%), Positives = 24/42 (57%)
Frame = +1
Query: 298 ISSKLKNEGHSNEQNVGFEIRGMQEKIDQATFNLKKIDQEMR 423
+++K+ EGH + V + +E++D N+ +++ E+R
Sbjct: 2 LAAKVTKEGHLIDSKVSAVMAEYEERLDMLASNMSQVESELR 43
>SB_37505| Best HMM Match : DM4_12 (HMM E-Value=5.3)
Length = 134
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 181 LNPREKRLPTDIMMAAYELAQLNKVKSGRSVKEVLYKNKISSKLKNEGHSNEQNVGFEIR 360
L+P + D+M A +++ + +K+ V E LY + K E NE N+ E++
Sbjct: 64 LHPEAFSVENDLMTATFKIKRPQIIKAFHDVIESLYH---EVETKGERPRNEVNLNLEMK 120
Query: 361 G 363
G
Sbjct: 121 G 121
>SB_32255| Best HMM Match : Spectrin (HMM E-Value=0.23)
Length = 172
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 301 SSKLKNEGHSNEQNVGFEIRGMQEKIDQATFNL-KKIDQEMRHLNTLLMEQQNFFQSLFK 477
SSKL+ EG ++ +I G+Q+++++ T NL K+DQ +R + + QS K
Sbjct: 9 SSKLEKEGTEKDE----KIEGLQKRLEE-TLNLNNKLDQSVRKKEENIRTLEKTLQSNEK 63
Query: 478 STE 486
E
Sbjct: 64 REE 66
>SB_21241| Best HMM Match : ErmC (HMM E-Value=1.1)
Length = 562
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 103 KCLHKYVYRTALVSPEAGKVILSVKPLNPREKRLPTDIMMAAYELAQLNKVKS--GRSVK 276
+ LH V+RT SPE V+ + R ++ T +A Q+ KS G K
Sbjct: 430 RLLHTNVHRTPNPSPERNAVLQAGIEALMRARQNITQTPFSATPTKQMTPTKSPRGTPTK 489
Query: 277 EVLYKNKISSKLKNEGHSNEQNVGFEIRGMQE 372
+ ++ KL+ S + + E++ M E
Sbjct: 490 KFGTPERLCEKLELSPRSPRRRLDHEVQEMDE 521
>SB_46461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 817
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 394 NLKKIDQEMRHLNTLLMEQQNFFQSLFKSTELVPYKSQHAS 516
+L +++E+ HL L +Q L E VP++S+ S
Sbjct: 101 SLNSVNREVEHLKAELQDQDKRLAELASGRERVPHRSESTS 141
>SB_8758| Best HMM Match : E-MAP-115 (HMM E-Value=0.25)
Length = 322
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 307 KLKNEGHSNEQNVGFEIRGMQEKIDQATFNLKKIDQEMRHLNTLLMEQQNFFQSLF 474
K K+EG E ++ +EK++ AT + D + +H +L + + SLF
Sbjct: 146 KFKSEGVEMEAERKAILKNKEEKLNAATEKGDQFDGQYKHTKKILEQLKTGIDSLF 201
>SB_7706| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 686
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = +1
Query: 304 SKLKNEGHSNEQNVGFEIRGMQEKIDQATFNLKKIDQEMRHLNTLLMEQQNFFQSLFKST 483
+K EGH N + + G+QEK D+ LK + +H + Q F ++ +
Sbjct: 337 NKFVEEGHGNADEIKARVDGLQEKWDE----LKSLADARQHKLDDSLAYQQFGANVDEEI 392
Query: 484 ELVPYKSQHASTPVYSDS 537
+ K+ + Y D+
Sbjct: 393 SWINEKNTLVGSDDYGDT 410
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,988,264
Number of Sequences: 59808
Number of extensions: 410430
Number of successful extensions: 1041
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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