Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30103
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.26
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 33 0.26
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 33 0.26
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 33 0.26
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 33 0.26
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 33 0.26
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 33 0.26
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 33 0.26
AF022971-1|AAG23975.1| 380|Caenorhabditis elegans Hypothetical ... 30 1.4
Z81117-6|CAB03323.1| 275|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 28 5.7
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 28 5.7
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 28 5.7
Z78016-4|CAC42335.1| 359|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z70756-5|CAA94791.2| 290|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y ++PE V+L+ PLNP+ R T IM +
Sbjct: 71 IEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETF 127
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 28 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 84
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 58 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 114
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 70 VEMGMFSAW--LPKCLHKYVYRTALVSPEAGKVILSVKPLNPREKR-LPTDIMMAAY 231
+E G+ + W + K H Y V+PE V+L+ PLNP+ R T IM +
Sbjct: 72 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
>AF022971-1|AAG23975.1| 380|Caenorhabditis elegans Hypothetical
protein C31B8.4 protein.
Length = 380
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 319 EGHSNE-QNVGFEIRGMQEKIDQATFNLKKIDQEMRHLNTLLMEQQNFFQSLFKSTELVP 495
E HS E QN+ E EKI + N+KK + E + L LL E + + + T ++
Sbjct: 157 EAHSKEIQNMSDEFHSKSEKILEDQLNVKKKNFEEKRLQ-LLEEHKQEIDHIDRLTAVIQ 215
Query: 496 YKSQHAST 519
+ +A+T
Sbjct: 216 CQRANAAT 223
>Z81117-6|CAB03323.1| 275|Caenorhabditis elegans Hypothetical
protein T06E6.13 protein.
Length = 275
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 370 EKIDQATFNLKKIDQEMRHLNTLLMEQQNFFQSLFKSTELVP 495
EKI+ N ++ID +RHL T ++++ +F + ST + P
Sbjct: 117 EKINFKGINYEEIDTILRHLKTGVLKEISFDYKITNSTIIPP 158
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/107 (21%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Frame = +1
Query: 175 KPLNPREKRLPTDIMMAAYELAQLNKVKSG-RSVKEVLYKN--KISSKLKNEGHSNEQNV 345
K + ++ I + +++QL K KS +S EVL + K + + + EQ +
Sbjct: 318 KKMLQKQAEYEEQIEIMLQKISQLEKAKSRLQSEVEVLIVDLEKAQNTIALLERAREQ-L 376
Query: 346 GFEIRGMQEKIDQATFNLKKIDQEMRHLNTLLMEQQNFFQSLFKSTE 486
++ ++ +ID+ T L+ +E+R +N L + ++ ++ + E
Sbjct: 377 ERQVGELKVRIDEITVELEAAQRELRAVNAELQKMKHLYEKAVEQKE 423
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/107 (21%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Frame = +1
Query: 175 KPLNPREKRLPTDIMMAAYELAQLNKVKSG-RSVKEVLYKN--KISSKLKNEGHSNEQNV 345
K + ++ I + +++QL K KS +S EVL + K + + + EQ +
Sbjct: 318 KKMLQKQAEYEEQIEIMLQKISQLEKAKSRLQSEVEVLIVDLEKAQNTIALLERAREQ-L 376
Query: 346 GFEIRGMQEKIDQATFNLKKIDQEMRHLNTLLMEQQNFFQSLFKSTE 486
++ ++ +ID+ T L+ +E+R +N L + ++ ++ + E
Sbjct: 377 ERQVGELKVRIDEITVELEAAQRELRAVNAELQKMKHLYEKAVEQKE 423
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/107 (21%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Frame = +1
Query: 175 KPLNPREKRLPTDIMMAAYELAQLNKVKSG-RSVKEVLYKN--KISSKLKNEGHSNEQNV 345
K + ++ I + +++QL K KS +S EVL + K + + + EQ +
Sbjct: 334 KKMLQKQAEYEEQIEIMLQKISQLEKAKSRLQSEVEVLIVDLEKAQNTIALLERAREQ-L 392
Query: 346 GFEIRGMQEKIDQATFNLKKIDQEMRHLNTLLMEQQNFFQSLFKSTE 486
++ ++ +ID+ T L+ +E+R +N L + ++ ++ + E
Sbjct: 393 ERQVGELKVRIDEITVELEAAQRELRAVNAELQKMKHLYEKAVEQKE 439
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = +1
Query: 232 ELAQLNKVKSGRSVKEVLYKNKISSKLKNEGHSNEQNVGFEIRGMQEKIDQATFNLKKID 411
EL + N ++ GR++ YKN + + L +G + Q V + M N + D
Sbjct: 351 ELLEKNHLEYGRNINIAQYKNGVRTTLNGQGRAYPQIVKQHLHNM---CSVQLVNPQTYD 407
Query: 412 QEMRHLNTLLMEQQNFF 462
+ +L ++ EQ F
Sbjct: 408 DRIWYLCEVIQEQFGCF 424
>Z78016-4|CAC42335.1| 359|Caenorhabditis elegans Hypothetical
protein R186.7 protein.
Length = 359
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/78 (25%), Positives = 33/78 (42%)
Frame = +1
Query: 283 LYKNKISSKLKNEGHSNEQNVGFEIRGMQEKIDQATFNLKKIDQEMRHLNTLLMEQQNFF 462
L +SS K E + +Q E+ E+ + F +K +E L EQ+
Sbjct: 167 LIMGTLSSFKKTEKKTTQQEKQEEVEKKLEETKKKDFESRK--EEKHDLLNKRREQEKEL 224
Query: 463 QSLFKSTELVPYKSQHAS 516
+SL + L+ Y HA+
Sbjct: 225 KSLQRKKALIQYAEHHAN 242
>Z70756-5|CAA94791.2| 290|Caenorhabditis elegans Hypothetical
protein T06E4.5 protein.
Length = 290
Score = 27.5 bits (58), Expect = 9.9
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = +1
Query: 160 VILSVKPLNPREKRLPTDIMMAAYELAQLNKVKSGRSVKEVLYKNKISSKLKNE-GHSNE 336
VI+ KPL EK +I+ + +LA++ K+K+G + + + + + L+N N
Sbjct: 43 VIIISKPLIIAEKS-HENILRS--KLAKVEKIKAGLEISNIRFS--MFNYLQNTVSIENP 97
Query: 337 QNVGFEIRGMQEKIDQATFNLKKIDQEMRHLNTLLMEQQNFFQSLFK 477
G Q K+ + L+K++ N LL + NF S+FK
Sbjct: 98 TGPAIFFNGNQ-KLQRVL--LQKLESLKGKPNELLFSKDNFIHSVFK 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,805,967
Number of Sequences: 27780
Number of extensions: 333643
Number of successful extensions: 1020
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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