Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30100
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    31   0.013
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    28   0.069
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.64 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.64 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   1.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   3.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   3.4  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   3.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   3.4  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    23   3.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   4.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 30.7 bits (66), Expect = 0.013
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = -1

Query: 158 CSVCNVFFIHLMYLLCIILKKY*HCAL--LLYILYKCVKF 45
           C    +F +HL++LLCI    Y +CAL  LL I Y C  F
Sbjct: 269 CCAFIIFTMHLLFLLCIY---YFYCALIILLCIYYFCRAF 305



 Score = 30.3 bits (65), Expect = 0.017
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = -1

Query: 179 VCVKYMACSVCNVFFIHLMYLLCIILKKY*HCALLLYILY 60
           +C+ Y  C+   +F +HL++LLCI    +  CA +++ ++
Sbjct: 144 LCIYYFYCAFI-IFTVHLLFLLCIY---HFFCAFIIFTMH 179



 Score = 25.4 bits (53), Expect = 0.49
 Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = -1

Query: 194 IVCMRVCVKYMACSVCNVFFIHLMYLLCIILKKY*H----CALLLYILY 60
           ++ + +C+ Y   +   +F +HL+ L+CI    Y H    CA +++ ++
Sbjct: 231 VLIILLCIYYFYYAFI-LFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMH 278



 Score = 25.0 bits (52), Expect = 0.64
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 184 MHTIYCQTFVLDVCCQIENRLKIVCLC*YFFYCSL 288
           MH ++C  F+      I     +  LC Y+FYC+L
Sbjct: 264 MHLLFCCAFI------IFTMHLLFLLCIYYFYCAL 292



 Score = 24.6 bits (51), Expect = 0.85
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 179 VCVKYMACSVCNVFFIHLMYLLCI 108
           +CV Y   +   +F +HL++LLCI
Sbjct: 111 LCVYYFYYAFI-IFTVHLLFLLCI 133



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 179 VCVKYMACSVCNVFFIHLMYLLCIILKKY*HCALLLYIL 63
           +C+ Y  C++  +  I+      II   + +CA  LY L
Sbjct: 283 LCIYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSLYPL 321



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 173 VKYMACSVCNVFFIHLMYLLC 111
           + Y  C V   F +HL++LLC
Sbjct: 56  IYYFYC-VSITFNVHLLFLLC 75


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 28.3 bits (60), Expect = 0.069
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = -2

Query: 340 FVHYYDC---ILYFYKHKFRQDYSKKNINKDKQFLIYSQFDNR--RQEQKFD 200
           F+ Y  C   +LY+   K    +  KN+  DK FL +  F N   R+E  F+
Sbjct: 2   FLAYIACFLLLLYYIYSKHYSYWQSKNVPTDKPFLFFGSFYNLVIRKEHIFE 53


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +2

Query: 155 YMPCI*RTHACILFIVKLLFL 217
           Y P + + +AC+L +VK+L++
Sbjct: 39  YYPSLAKCYACLLMVVKILWV 59


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -1

Query: 146 NVFFIHLMYLLCIILKKY*HCALLLYILYKCV 51
           NV F+HL  L  + + K   C L L IL  CV
Sbjct: 246 NVTFVHLAVLNILRVGKNFVCLLSLIILCDCV 277


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +2

Query: 251 LFVFVNIFFTVVL 289
           +F+FVN+FF V++
Sbjct: 98  IFIFVNVFFWVII 110


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -3

Query: 324 IVFYTSISTNFAKTTVKKILTKTNNF*SILNLTTDVKN 211
           IVFY +   +    T KKI+ K  +F + L    D++N
Sbjct: 308 IVFYVANIFSLDLDTFKKIMQKAWSFFTALKNMHDIRN 345


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 539  GVSSPTTVFLERYDMSFLLLAWLCP 613
            GV SP+ +FL     SF + A L P
Sbjct: 999  GVGSPSAIFLIAMTGSFFIAACLHP 1023


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 539  GVSSPTTVFLERYDMSFLLLAWLCP 613
            GV SP+ +FL     SF + A L P
Sbjct: 999  GVGSPSAIFLIAMTGSFFIAACLHP 1023


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 539  GVSSPTTVFLERYDMSFLLLAWLCP 613
            GV SP+ +FL     SF + A L P
Sbjct: 999  GVGSPSAIFLIAMTGSFFIAACLHP 1023


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 539  GVSSPTTVFLERYDMSFLLLAWLCP 613
            GV SP+ +FL     SF + A L P
Sbjct: 999  GVGSPSAIFLIAMTGSFFIAACLHP 1023


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 307 RSIKYNHNSVQTYNSN*L*SNFDY 378
           + ++Y +++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 307 RSIKYNHNSVQTYNSN*L*SNFDY 378
           + ++Y +++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = +2

Query: 248 KLFVFVNIFFTVVLAKFVLIEV*NTIIIVYK---LTIPISYSRISTT 379
           ++ +FVN+    V  +FVL+ V + +  V     L +  SY  I TT
Sbjct: 121 RISIFVNLAILGVFGEFVLVFVPDYVFFVENEPILYLIFSYCPIVTT 167


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 307 RSIKYNHNSVQTYNSN*L*SNFDY 378
           + ++Y +++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 307 RSIKYNHNSVQTYNSN*L*SNFDY 378
           + ++Y +++ Q YNSN L + + Y
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGY 81


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/24 (25%), Positives = 15/24 (62%)
 Frame = -1

Query: 173 VKYMACSVCNVFFIHLMYLLCIIL 102
           + Y    +C++  +H ++L+C +L
Sbjct: 106 IGYWLHQICHICELHTIFLVCNVL 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,510
Number of Sequences: 336
Number of extensions: 4201
Number of successful extensions: 31
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)