Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30100
         (740 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113522-1|AAM29527.1|  658|Drosophila melanogaster RE60337p pro...    29   5.0  
AE013599-89|AAF57326.2|  658|Drosophila melanogaster CG11665-PA ...    29   5.0  
AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p pro...    29   8.8  
AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA...    29   8.8  

>AY113522-1|AAM29527.1|  658|Drosophila melanogaster RE60337p
           protein.
          Length = 658

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 250 IVCLC*YFFYCSLGEICAYRSIKYNHNSV 336
           I  LC YF Y SLG + +  S+KY++ +V
Sbjct: 97  IPALC-YFLYSSLGPVSSILSVKYSYRTV 124


>AE013599-89|AAF57326.2|  658|Drosophila melanogaster CG11665-PA
           protein.
          Length = 658

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 250 IVCLC*YFFYCSLGEICAYRSIKYNHNSV 336
           I  LC YF Y SLG + +  S+KY++ +V
Sbjct: 97  IPALC-YFLYSSLGPVSSILSVKYSYRTV 124


>AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p
           protein.
          Length = 539

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 253 QFLIYSQFDNRRQEQKFDNK*YACVCASNTWHVVCVM 143
           QF  ++Q+  R  E+  D     CV  SN W ++C++
Sbjct: 163 QFQNFAQYRARLTEKSQDEIQQLCVNHSNEWSILCIL 199


>AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA
           protein.
          Length = 539

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 253 QFLIYSQFDNRRQEQKFDNK*YACVCASNTWHVVCVM 143
           QF  ++Q+  R  E+  D     CV  SN W ++C++
Sbjct: 163 QFQNFAQYRARLTEKSQDEIQQLCVNHSNEWSILCIL 199


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,590,788
Number of Sequences: 53049
Number of extensions: 670291
Number of successful extensions: 1419
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)