Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30096
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   1.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   1.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   5.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.9  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 402 LHFYLSWLKDQLKTNAEEMTAELEHAEQ 485
           LHF+ SWLK + K   EE+   +E   Q
Sbjct: 414 LHFHASWLKSK-KEFKEELIKFIEEMLQ 440


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 402 LHFYLSWLKDQLKTNAEEMTAELEHAEQ 485
           LHF+ SWLK + K   EE+   +E   Q
Sbjct: 421 LHFHASWLKSK-KEFKEELIKFIEEMLQ 447


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +3

Query: 300 LNLLNRQDEF-VQHMTARIIAKLACWHPQLMDKSDLHFYLSW 422
           LN LN+  E     +T   +  L  W   L +K+D  +Y+S+
Sbjct: 391 LNPLNKGTEADSSFVTLPQLHSLDEWDDTLKEKADFQYYVSY 432


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 480 EQVMLEHEKEKFSDKHKHH 536
           E ++L H +E  +D H+HH
Sbjct: 112 ENMLLRHHEE-VADGHQHH 129


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 480 EQVMLEHEKEKFSDKHKHH 536
           E ++L H +E  +D H+HH
Sbjct: 112 ENMLLRHHEE-VADGHQHH 129


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 480 EQVMLEHEKEKFSDKHKHH 536
           E ++L H +E  +D H+HH
Sbjct: 112 ENMLLRHHEE-VADGHQHH 129


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -1

Query: 522 YRRTFLSHAPT*PAQHALTQLS 457
           Y   FL H P  PA  A  QLS
Sbjct: 232 YGSWFLPHQPIYPAVTATVQLS 253


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 502 RKKSSPINTNITREKAHHSDAGNEKYSSL 588
           RKKS P+   +  E+A H     +  S L
Sbjct: 595 RKKSLPVRKLLELERAQHEFKNGDSSSLL 623


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,160
Number of Sequences: 336
Number of extensions: 3021
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)