Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30096
(669 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0822 + 21762662-21762767,21763295-21763347,21764639-217647... 55 4e-08
12_02_0772 - 23029703-23029715,23029835-23030463,23030637-230316... 33 0.21
11_01_0471 - 3648871-3649078,3649841-3649926,3650111-3650155,365... 33 0.21
08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651 32 0.48
07_01_0376 + 2815419-2815755,2815912-2817659 32 0.48
06_01_0223 - 1709897-1709912,1710188-1712520 32 0.48
07_01_0362 - 2667031-2667090,2667182-2667426,2667749-2669471,266... 31 0.63
01_01_1236 - 10020837-10021041,10021746-10021831,10022552-100230... 31 0.83
01_01_0100 - 755894-756662,757086-757598,758718-761050 31 1.1
09_04_0085 + 14441123-14443507,14443731-14443787 30 1.5
08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391 30 1.5
08_02_0001 + 11166161-11166488,11166504-11167390 30 1.5
04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,962... 30 1.9
05_04_0111 - 18079051-18079970,18080384-18080462 29 4.4
08_02_0107 + 12494650-12495270,12507463-12508146,12508325-125084... 28 5.9
06_03_1114 + 27719099-27719252,27719340-27719570,27720508-277211... 28 5.9
03_05_0435 - 24259864-24260206,24260302-24260467,24261175-242612... 28 5.9
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 28 7.7
07_01_0828 - 6679393-6680432,6680448-6680784 28 7.7
06_01_0045 + 420300-420530,422730-423006,423974-424014 28 7.7
04_04_1638 + 34974369-34974764 28 7.7
>07_03_0822 +
21762662-21762767,21763295-21763347,21764639-21764764,
21764960-21765062,21765146-21765222
Length = 154
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/70 (38%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +3
Query: 99 NQRGQKDLPDKNPDACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRETKFS 278
+QRG L D++ + VFLN+L +ISK+ T++Y+L LID++L+ + R +F + S
Sbjct: 87 SQRGP--LLDEDGPSYVRVFLNILRNISKEDTVEYVLALIDEMLAVNPKRAALFYDNSLS 144
Query: 279 G-NVWQPFLN 305
G +++ PFL+
Sbjct: 145 GEDIYDPFLS 154
>12_02_0772 -
23029703-23029715,23029835-23030463,23030637-23031673,
23031830-23032166
Length = 671
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 363 LACWHPQLMDKSDLHFYLSWLKDQLKTNAEEMTAELEHAEQVMLEHEKEKFSDKH 527
+ C P++ DK +L+FY + + E+M E+ +Q +E K K DKH
Sbjct: 286 MKCEWPKIRDK-ELYFYRELARVKKVKKNEDMAVEIFKNQQTKIEQIKRKEQDKH 339
>11_01_0471 -
3648871-3649078,3649841-3649926,3650111-3650155,
3650306-3650815,3651700-3653757
Length = 968
Score = 33.1 bits (72), Expect = 0.21
Identities = 23/90 (25%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Frame = +3
Query: 132 NPDACAEVFLNLLTHI--SKDHTIQYILVLIDDILSE-DKSRVKIFRETKFSGNVWQPFL 302
N + +F+ ++ ++ S+DHTIQ +L+L +I+ + D + K+ E + Q
Sbjct: 47 NGETLPHLFITVVRYVLPSEDHTIQKLLLLYLEIVDKRDVASGKVLPEMIL---ICQNLR 103
Query: 303 NLLNRQDEFVQHMTARIIAKLACWHPQLMD 392
N L +E+++ +T R + +L P+L++
Sbjct: 104 NNLQHPNEYIRGVTLRFLCRLN--EPELLE 131
>08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651
Length = 642
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 363 LACWHPQLMDKSDLHFYLSWLKDQLKTNAEEMTAELEHAEQVMLEHEKEKFSDKH 527
+ C P++ DK +L+FY + + E+M E+ ++ +E K K DKH
Sbjct: 159 MKCEWPKIRDK-ELYFYRELARVKKVKKNEDMAVEIFKNQETKIEQIKRKEQDKH 212
>07_01_0376 + 2815419-2815755,2815912-2817659
Length = 694
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 363 LACWHPQLMDKSDLHFYLSWLKDQLKTNAEEMTAELEHAEQVMLEHEKEKFSDKH 527
+ C P++ DK +L+FY + + E+M E+ ++ +E K K DKH
Sbjct: 286 MKCEWPKIRDK-ELYFYRELARVKKVKKNEDMAVEIFKNQETKIEQIKRKEQDKH 339
>06_01_0223 - 1709897-1709912,1710188-1712520
Length = 782
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 363 LACWHPQLMDKSDLHFYLSWLKDQLKTNAEEMTAELEHAEQVMLEHEKEKFSDKH 527
+ C P++ DK +L+FY + + E+M E+ ++ +E K K DKH
Sbjct: 338 IKCEWPKIRDK-ELYFYRELARVKKVKKNEDMAVEIFKNQETKIEQIKRKEQDKH 391
>07_01_0362 -
2667031-2667090,2667182-2667426,2667749-2669471,
2669578-2669921,2670544-2670667,2671350-2671599,
2672486-2672571
Length = 943
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/80 (21%), Positives = 35/80 (43%)
Frame = +3
Query: 309 LNRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQLKTNAEEMTAELEHAEQV 488
+N QDE + A+ + L W P+ + W ++ ++ +A+ +
Sbjct: 257 INHQDESCSYSQAQKLISLCGWEPRWLPNVQ-----DWEENSTRSAKHTASADPDQIHSR 311
Query: 489 MLEHEKEKFSDKHKHHKGEG 548
+ EH++ +S K KG+G
Sbjct: 312 LPEHKQNSYSASVKKDKGKG 331
>01_01_1236 -
10020837-10021041,10021746-10021831,10022552-10023061,
10023914-10025965
Length = 950
Score = 31.1 bits (67), Expect = 0.83
Identities = 20/89 (22%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +3
Query: 132 NPDACAEVFLNLLTHI--SKDHTIQYILVLIDDILSEDKSRVKIFRETKFSGNVWQPFLN 305
N + +F+ ++ ++ S+DHTIQ +L+L +I+ + + + E + Q N
Sbjct: 47 NGETLPTLFITVVRYVLPSEDHTIQKLLLLYLEIIDKRDAAGRGLPEMIL---ICQNLRN 103
Query: 306 LLNRQDEFVQHMTARIIAKLACWHPQLMD 392
L+ +E+++ +T R + +L+ P++++
Sbjct: 104 NLHHPNEYIRGVTLRFLCRLS--EPEVLE 130
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 363 LACWHPQLMDKSDLHFYLSWLKDQLKTNAEEMTAELEHAEQVMLEHEKEKFSDKH 527
+ C P++ DK +L+FY + + E+M E+ ++ +E K+K D+H
Sbjct: 338 MKCEWPKIRDK-ELYFYRELARVKKVKKNEDMAVEIFKNQETKIEQIKKKEQDEH 391
>09_04_0085 + 14441123-14443507,14443731-14443787
Length = 813
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 363 LACWHPQLMDKSDLHFYLSWLKDQLKTNAEEMTAELEHAEQVMLEHEKEKFSDKH 527
+ C P++ DK +L+FY + + E+M E+ ++ +E K K DK+
Sbjct: 338 MKCEWPKIRDK-ELYFYRELARVKKVKKNEDMAVEIFKTQETKIEQIKRKEQDKY 391
>08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391
Length = 818
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 363 LACWHPQLMDKSDLHFYLSWLKDQLKTNAEEMTAELEHAEQVMLEHEKEKFSDKH 527
+ C P++ DK +L+FY + + E+M ++ ++ +E K K DKH
Sbjct: 333 MKCEWPKIRDK-ELYFYRELARVKKVKKNEDMAVKIFKNQETKIEQIKRKEQDKH 386
>08_02_0001 + 11166161-11166488,11166504-11167390
Length = 404
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 363 LACWHPQLMDKSDLHFYLSWLKDQLKTNAEEMTAELEHAEQVMLEHEKEKFSDKH 527
+ C P++ DK +L+FY + + E+M ++ ++ +E K K DKH
Sbjct: 330 MKCEWPKIRDK-ELYFYRELARVKKVKKNEDMVVKIFKNQETKIEQIKRKEQDKH 383
>04_03_0024 -
9623178-9624001,9624502-9624678,9625144-9625305,
9625520-9626032,9626801-9629153
Length = 1342
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 363 LACWHPQLMDKSDLHFYLSWLKDQLKTNAEEMTAELEHAEQVMLEHEKEKFSDKH 527
+ C P++ +K +L+FY + + E+M E+ ++ +E K K DKH
Sbjct: 338 MKCEWPKIRNK-ELYFYRELARVKKVKKNEDMAVEIFKNQETKIEQIKRKEQDKH 391
>05_04_0111 - 18079051-18079970,18080384-18080462
Length = 332
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 363 LACWHPQLMDKSDLHFYLSWLKDQLKTNAEEMTAELEHAEQVMLEHEKEKFSDKH 527
+ C P++ DK +L+FY + + E+M E+ ++ +E K DKH
Sbjct: 200 MKCEWPKIRDK-ELYFYRELARVKKVKKNEDMAVEIFKNQETKIEQIKRIEQDKH 253
>08_02_0107 +
12494650-12495270,12507463-12508146,12508325-12508472,
12508493-12508584,12508713-12509426
Length = 752
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +3
Query: 153 VFLNLLTHISKDHTIQYILVLIDDILSEDKS 245
+F+NL+ + ++ ++++V IDDIL +S
Sbjct: 125 IFMNLMNKVFMEYVDKFVVVFIDDILVYSQS 155
>06_03_1114 +
27719099-27719252,27719340-27719570,27720508-27721148,
27721225-27722124
Length = 641
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = -2
Query: 278 REFRLTKYLHPRFIFRKNVINEHKNVLNGVVLADMRQEVEKDFGTGIRILVRQIFL 111
++F L P + R V H+N VV+ D V +GT IR + IFL
Sbjct: 94 KDFTLDPANFPADLLRPFVDRLHRNGQKYVVIIDPGISVNATYGTFIRAIKEDIFL 149
>03_05_0435 -
24259864-24260206,24260302-24260467,24261175-24261241,
24261553-24261648,24261718-24261898,24262252-24262323,
24262393-24262505,24262596-24262817,24263262-24263910,
24264118-24264206,24265932-24266015,24266219-24266358,
24266522-24266573
Length = 757
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 459 TAELEHAEQVMLEHEKEKFSDKHKHH 536
T E+E A++ M +H KE+ S+ K+H
Sbjct: 595 TKEIERADRKMKDHPKEEQSEMDKYH 620
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +3
Query: 156 FLNLLTHISKDHTIQYILVLIDDILSEDKSR 248
F+NL+ + ++ ++++V IDDIL K++
Sbjct: 973 FMNLMNKVFMEYLDKFVVVFIDDILIYSKTK 1003
>07_01_0828 - 6679393-6680432,6680448-6680784
Length = 458
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 363 LACWHPQLMDKSDLHFYLSWLKDQLKTNAEEMTAELEHAEQVMLEHEKEKFSDKH 527
+ C P++ DK +L+FY + + E+M E+ + +E K DKH
Sbjct: 333 MKCEWPKIRDK-ELYFYRELARVKKVKKNEDMAVEIFKNHETKIEQIKRIEQDKH 386
>06_01_0045 + 420300-420530,422730-423006,423974-424014
Length = 182
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 342 SCAGQIHPDGSANSGRAAKRCQRISSHEISSPS 244
S ++ P SAN GRA C R++ EIS S
Sbjct: 51 SATEEVRPHLSAN-GRATSNCSRLARREISGTS 82
>04_04_1638 + 34974369-34974764
Length = 131
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -1
Query: 522 YRRTFLSHAPT*PAQHALTQLSFPRHWS*VDL*ARRDRSANHFCPSAAG 376
+RRT +HAP+ P Q A ++ H + RR+R+ + F P A G
Sbjct: 42 FRRTLGAHAPSVPRQ-ATSRRHQTSHGAVAGRGLRRNRNTSMFAPPAHG 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,703,796
Number of Sequences: 37544
Number of extensions: 354044
Number of successful extensions: 1044
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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