Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30096
         (669 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    25   0.86 
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   1.5  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   2.0  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   2.0  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   2.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   4.6  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    21   8.0  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -3

Query: 601 QKSCKGSNIFHFLHQNDEPSPL*CLCLSENFSFSCSNITCSAC 473
           QK+ +   +      ND+P P  C    EN + S SN   + C
Sbjct: 140 QKNLQCCGVHSLSDYNDKPIPASCCNSPENNTCSISNSYTNGC 182


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 508 KSSPINTNITREKAHHSDAGNEKYSS 585
           KS   N N   ++AHHS   N ++++
Sbjct: 437 KSDNQNNNQHNDQAHHSSKSNNRHNN 462


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 195 WCGPC*YASGG*ERLRHRHQDSC 127
           WCG    +SG  E  R +H D+C
Sbjct: 36  WCGHGNKSSGPNELGRFKHTDAC 58


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 195 WCGPC*YASGG*ERLRHRHQDSC 127
           WCG    +SG  E  R +H D+C
Sbjct: 41  WCGHGNKSSGPNELGRFKHTDAC 63


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 195 WCGPC*YASGG*ERLRHRHQDSC 127
           WCG    +SG  E  R +H D+C
Sbjct: 41  WCGHGNKSSGPNELGRFKHTDAC 63


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 282 NVWQPFLNLLNRQD 323
           N W+P  NL+N  D
Sbjct: 273 NTWEPISNLINCSD 286


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 492 LEHEKEKFSDKHKHHK 539
           L +EKEKF ++   HK
Sbjct: 255 LHNEKEKFLEERTSHK 270


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,493
Number of Sequences: 438
Number of extensions: 3776
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)