Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30095
(409 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 47 1e-06
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 47 1e-06
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 42 3e-05
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 40 1e-04
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 39 3e-04
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 39 3e-04
SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces pomb... 36 0.002
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 32 0.039
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 32 0.039
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 29 0.28
SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces pomb... 29 0.37
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 28 0.49
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 0.85
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 26 2.0
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 26 2.0
SPBC8E4.05c |||fumarate lyase superfamily|Schizosaccharomyces po... 25 3.4
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 25 3.4
SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subuni... 25 4.5
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 25 4.5
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 25 4.5
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch... 25 4.5
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 25 4.5
SPCC306.06c |||ER membrane protein, BIG1 family |Schizosaccharom... 24 7.9
SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces... 24 7.9
SPCC790.03 |||rhomboid family protease|Schizosaccharomyces pombe... 24 7.9
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 24 7.9
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 24 7.9
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 24 7.9
SPAC1F8.07c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 24 7.9
SPBC30B4.07c |tfb4||transcription factor TFIIH complex subunit T... 24 7.9
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 47.2 bits (107), Expect = 1e-06
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Frame = +2
Query: 8 VLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGRXLENELNTKYGPNSVKFYKCDVT 187
VLITG++ G+G +V++ L +G +A A D+ ++L +K K DVT
Sbjct: 8 VLITGSSKGLGYALVKVGLAQGYNVIAC-SRAPDTITIEHSKL--------LKL-KLDVT 57
Query: 188 DEELFLELFDTVKNEQGYLDVVINNAAI-MNDSYKSYK-----KQIDINVTALVTGTLKA 349
D + F K G +D+VINNA + ++SY +Q+++N + T +A
Sbjct: 58 DVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITKEA 117
Query: 350 IEIMGKQNGGKGXTVLNISS 409
+ +M + GKG +L ISS
Sbjct: 118 LNLM--RESGKGGRILQISS 135
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 47.2 bits (107), Expect = 1e-06
Identities = 35/114 (30%), Positives = 55/114 (48%)
Frame = +2
Query: 2 KNVLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGRXLENELNTKYGPNSVKFYKCD 181
K +LITGA+SGIG+ I + + + + + EL +KY SV K D
Sbjct: 7 KTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEV-SVLPLKLD 65
Query: 182 VTDEELFLELFDTVKNEQGYLDVVINNAAIMNDSYKSYKKQIDINVTALVTGTL 343
V+D + + +++ E +DV+INNA + + K ID VT + T L
Sbjct: 66 VSDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVL 119
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 42.3 bits (95), Expect = 3e-05
Identities = 23/106 (21%), Positives = 54/106 (50%)
Frame = +2
Query: 2 KNVLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGRXLENELNTKYGPNSVKFYKCD 181
K L+TG++ GIG + +G K V + E+ + + +++ + + ++F + D
Sbjct: 43 KVALVTGSSGGIGYVTALELARKGAK-VYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLD 101
Query: 182 VTDEELFLELFDTVKNEQGYLDVVINNAAIMNDSYKSYKKQIDINV 319
+ D E + ++ ++ L +++NNA IMN ++ K ++ +
Sbjct: 102 LLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQI 147
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 40.3 bits (90), Expect = 1e-04
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Frame = +2
Query: 8 VLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGRXLENELNTKYGPNSVKFYKCDVT 187
VLITGAA GIG+ + ++ E G VA +D+ + S ++ + DV+
Sbjct: 8 VLITGAAGGIGKVLCKMFTELG-DRVAGIDIVDPS-----------KVQDAALALQADVS 55
Query: 188 DEELFLELFDTVKNEQGYLDVVINNAAIMND------SYKSYKKQIDINVTALVTGTLKA 349
+ + V G +DV+INNA + +D S++S+ + + +
Sbjct: 56 KADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLTQRYV 115
Query: 350 IEIMGKQNGGKGXTVLNISS 409
I M KQ GKG +++NI S
Sbjct: 116 IPHMAKQ--GKGGSIVNIGS 133
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 39.1 bits (87), Expect = 3e-04
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Frame = +2
Query: 2 KNVLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGRXLENELNTKYGPNSVKFY--K 175
KN ++ G A GIG + + E G + + G E+ N VK Y K
Sbjct: 22 KNAVVFGGARGIGHAICSVFAEAGANAFIVYNTTP--GEKAAKEIAQA---NGVKTYTCK 76
Query: 176 CDVTDEELFLELFDTVKNEQGYLDVVINNAAI------MNDSYKSYKKQIDINVTALVTG 337
CDVT + F ++ +D+V+ N I ++ +Y+ + +I++N+ +
Sbjct: 77 CDVTIPKEVEHAFAEIQKVFDTIDIVVPNNGICTGKSAIDMTYEEFANEINVNLLGVFNV 136
Query: 338 TLKAIEIMGKQNGG 379
A I KQ G
Sbjct: 137 AHNAGPIFQKQGHG 150
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 39.1 bits (87), Expect = 3e-04
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 2 KNVLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGRXLENELNTKYGPNSVKFYKCD 181
K LITG + GIG + + G +V +L EL K+G + K Y C
Sbjct: 10 KTTLITGGSGGIGFSIAKAFAAAG-SNVGLLYGRNKKALEYAAELRDKHGVQA-KAYSCP 67
Query: 182 VTDEELFLELFD-TVKNEQGYLDVVINNAAI 271
+ + +E + V+ G LDV+I NA I
Sbjct: 68 IENRSAVIETTNQAVEELGGRLDVMIANAGI 98
>SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 35.9 bits (79), Expect = 0.002
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Frame = +2
Query: 8 VLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGRXLEN-ELNTKYGPNSVKFYKCDV 184
+L+TG A IG V ++ G K + + ++ + E + S+KF+K D+
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAVARVEFIVR---KSIKFFKLDL 64
Query: 185 TDEELFLELFDTVKNEQGYLDVVINNAAI--MNDSYKSYKKQIDINVTALVT 334
D+E ++FDT K + VI+ AA+ + +S K + D N+ +T
Sbjct: 65 RDKEGLAQIFDTFK-----IKGVIHFAALKAVGESMKLPLEYYDNNICGTIT 111
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 31.9 bits (69), Expect = 0.039
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 KNVLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGRXLENELNTKYGPNS-VKFYKC 178
K L+TG SGIG+ + G V E + +L + G N + K
Sbjct: 43 KKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIEREGRNCWIWEGKL 102
Query: 179 DVTDEELFLELFDTVKNEQGYLDVVINNAA 268
D +D +L D + G++DV++NN A
Sbjct: 103 DKSDN--CRDLVDFALKKLGWIDVLVNNIA 130
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 31.9 bits (69), Expect = 0.039
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Frame = +2
Query: 2 KNVLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGRXLENELNTKYGPNSVKFYKCD 181
+ VLITG +SG+G+ + ++ ++G I+ E + L+ G
Sbjct: 2 RKVLITGGSSGLGKRIAQIWSQKG-HQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADV 60
Query: 182 VTDEELFLELFDTVKNEQGYLDVVINNAAIMNDS--YKSYKKQID----IN-VTALVTGT 340
+D + +F++V+ +D V++ A ++ S ++ +K+ID N V+A+
Sbjct: 61 QSDMKNLKSIFESVE-----IDTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSAIKLSK 115
Query: 341 LKAIEIMGKQNGGKGXTVLNISS 409
+ +E +N + +LNISS
Sbjct: 116 MAILEWFRNKNSERDRLILNISS 138
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 29.1 bits (62), Expect = 0.28
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 8 VLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGR 118
+ +TGAA IG +VR +LE G + V ++ E++ +
Sbjct: 3 IFVTGAAGFIGSEIVRQLLEAGHEVVGLVRSEENAAK 39
>SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 28.7 bits (61), Expect = 0.37
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Frame = +2
Query: 8 VLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGRXLENELNTKYGPNSVKFYKCDVT 187
VL+TG A IG ++LE+G V I+D +S + + G V F++ D+
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEKGY-DVVIVDNLCNSRVEAVHRIEKLTG-KKVIFHQVDLL 66
Query: 188 DEELFLELFDTVKNEQGYLDVVINNAAIMNDSYKSYKKQIDINVTAL---VTGTLKAIEI 358
DE ++F N+ + VI+ A + K+ + + + ++ ++GT+ IE
Sbjct: 67 DEPALDKVF---ANQN--ISAVIHFAGL-----KAVGESVQVPLSYYKNNISGTINLIEC 116
Query: 359 MGKQN 373
M K N
Sbjct: 117 MKKYN 121
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 28.3 bits (60), Expect = 0.49
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 8 VLITGAASGIGEGVVRLILERGVKHVAILDVAED 109
V++TG +SGIG+ VV + G + V +L D
Sbjct: 78 VMVTGGSSGIGQVVVEKLASLGAQVVILLRTEPD 111
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 0.85
Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = -2
Query: 138 LSSFSRXLPESSAT--SKIATCLTPRSNISRTTPSPIPLAAPVISTF 4
LS++S + SS+T S ++ + S ++ ++ SPIP ++ ++ST+
Sbjct: 663 LSTYSSSVIPSSSTLVSSSSSLIVSSSPVASSSSSPIPSSSSLVSTY 709
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 26.2 bits (55), Expect = 2.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 11 LITGAASGIGEGVVRLILERGVKHVAILD 97
L+ GA + +G GV R +L GV+HV +D
Sbjct: 339 LLLGAGT-LGCGVARNLLSWGVRHVTFVD 366
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 26.2 bits (55), Expect = 2.0
Identities = 23/88 (26%), Positives = 42/88 (47%)
Frame = +2
Query: 8 VLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGRXLENELNTKYGPNSVKFYKCDVT 187
++ITG + +G +++ L+RG VA LD E + + N+K+ KC++T
Sbjct: 38 IVITGGSGILGHAIIQEALDRGFS-VASLDSTEPASFL---QYNSKFSA-----LKCNIT 88
Query: 188 DEELFLELFDTVKNEQGYLDVVINNAAI 271
++ ++K +IN AAI
Sbjct: 89 KDKDVEGCVHSLKKMNRTPFALINAAAI 116
>SPBC8E4.05c |||fumarate lyase superfamily|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 25.4 bits (53), Expect = 3.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 179 DVTDEELFLELFDTVKNEQGYLDVVINNAAIM 274
DVTD ++ D+ K +GYL+ I A ++
Sbjct: 110 DVTDSATVRQMIDSFKIIKGYLEKAIELATVL 141
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 25.4 bits (53), Expect = 3.4
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 8 VLITGAASGIGEGVVRLILERGVKHVAILDV 100
VL+ GA GIG +++ +L GVK V I+D+
Sbjct: 28 VLLVGAG-GIGCELLKNLLMSGVKEVHIIDL 57
>SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subunit
8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 25.0 bits (52), Expect = 4.5
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 170 YKCDVTDEELFLELFDTVKNEQGYLDVVINNAAIMNDSYKSYKKQ 304
YK D+T +E+F E+F E+ +D+ + ++D ++ + K+
Sbjct: 7 YK-DITQKEMFNEIFKEYVKEEKQIDLGTCDQDSVHDLWRRFVKR 50
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 25.0 bits (52), Expect = 4.5
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +1
Query: 7 CAYHWCRKRYRRRSG-----PAYIGARCQACCYFGCCRGFWKXS 123
C Y C K+Y R S + R C Y GC + F++ S
Sbjct: 25 CPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKS 68
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 25.0 bits (52), Expect = 4.5
Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 5 NVLITGAASGIGEGVVRLILERGVKHVAILDVAEDSGRXLENELNTK-YGPNSVKFYKCD 181
++L+TG + G+G+ + + ++ RG + + ++K + V F D
Sbjct: 24 HILVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKIHEDQQVSFESVD 83
Query: 182 VTDEE 196
+T E
Sbjct: 84 LTSYE 88
>SPCC126.07c |||human CTD-binding SR-like protein rA9
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 571
Score = 25.0 bits (52), Expect = 4.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 145 FCIELILEXSSRILGNIQNSNMLDTSLQYKPDHSFADTACGTSDKHI 5
F LI + I S ML SLQ++ +S ++ + GTSD H+
Sbjct: 381 FLASLISNINQPSTSRIDTSFML--SLQHEIKNSHSEASDGTSDVHL 425
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 4.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 87 ATCLTPRSNISRTTPSPIPLA 25
A ++ +N+SR TP+P+P A
Sbjct: 64 AATVSESANVSRPTPAPVPPA 84
>SPCC306.06c |||ER membrane protein, BIG1 family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 311
Score = 24.2 bits (50), Expect = 7.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 150 PYFVLSSFSRXLPESSATSKIATC 79
P F+ S+ S+ LP+SS S I+TC
Sbjct: 23 PIFLFSTNSK-LPKSSDDSSISTC 45
>SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 338
Score = 24.2 bits (50), Expect = 7.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 2 KNVLITGAASGIGEGVVRLILE 67
K LITG+ SG+G G+ +L+
Sbjct: 5 KYALITGSNSGLGFGIATRLLQ 26
>SPCC790.03 |||rhomboid family protease|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 248
Score = 24.2 bits (50), Expect = 7.9
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -2
Query: 399 FRTVXPLPPFCFPIISIAFSVPVTKAVTFI 310
F + +P +CFPII + + + +FI
Sbjct: 148 FFNLFSIPAYCFPIIYLIMTTILVPKASFI 177
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 24.2 bits (50), Expect = 7.9
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -2
Query: 132 SFSRXLPESSATSKIATCLTPRSNISRTT--PSPIPLAAP 19
S S+ L +SS + IAT +++S T PSP P +AP
Sbjct: 309 SISKQLSKSSTS--IATVAPSLASVSSVTKSPSPTPQSAP 346
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 24.2 bits (50), Expect = 7.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 97 IQNSNMLDTSLQYKPDHSFADTAC 26
+ NS T LQ+ PD ++ T+C
Sbjct: 187 VHNSGSTITDLQFYPDRTYFITSC 210
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 24.2 bits (50), Expect = 7.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 114 PESSATSKIATCLTPRSNISRTTPSPIP 31
P + + A L P N SRT+ P+P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVP 418
>SPAC1F8.07c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 594
Score = 24.2 bits (50), Expect = 7.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 42 KEWSGLYWSEVSS 80
K ++G+YW EVSS
Sbjct: 261 KNYAGVYWGEVSS 273
>SPBC30B4.07c |tfb4||transcription factor TFIIH complex subunit Tfb4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 24.2 bits (50), Expect = 7.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 245 DVVINNAAIMNDSYKSYKKQIDINVTALVTGTL 343
DV + MN + + KK I INV + GTL
Sbjct: 166 DVALQYIPTMNCIFCAQKKNIPINVCNIEGGTL 198
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,639,467
Number of Sequences: 5004
Number of extensions: 30986
Number of successful extensions: 153
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 140222766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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