Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30094
(692 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 67 2e-11
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 67 2e-11
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 66 3e-11
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 57 2e-08
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 56 3e-08
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 54 2e-07
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 54 2e-07
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 44 1e-04
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 44 1e-04
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 42 8e-04
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 42 8e-04
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 42 8e-04
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 42 0.001
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 67.3 bits (157), Expect = 2e-11
Identities = 27/77 (35%), Positives = 49/77 (63%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMK 191
++P+ TY S ++ +A+R++ID +Q QSR R+ GAPW++RN ++H DL ++ + + +
Sbjct: 790 LKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIA 849
Query: 192 SASERYFDKAMRHDNRL 242
+Y +K H N L
Sbjct: 850 EKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 67.3 bits (157), Expect = 2e-11
Identities = 27/77 (35%), Positives = 49/77 (63%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMK 191
++P+ TY S ++ +A+R++ID +Q QSR R+ GAPW++RN ++H DL ++ + + +
Sbjct: 790 LKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIA 849
Query: 192 SASERYFDKAMRHDNRL 242
+Y +K H N L
Sbjct: 850 EKKTKYNEKLTTHTNPL 866
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 66.5 bits (155), Expect = 3e-11
Identities = 37/107 (34%), Positives = 56/107 (52%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 182
K + P Y ++ A +HI +Q++Q++ RL G WFVRN LH DL L ++
Sbjct: 796 KQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFD 855
Query: 183 YMKSASERYFDKAMRHDNRLIVAAADYSPNPDHAGASHRRRPXHVLT 323
+ S RY D+ RH NRL +A + S P +RR+P ++T
Sbjct: 856 EINKHSSRYHDRLERHRNRL-ASALNRSRPPRRL---NRRQPRDLIT 898
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 57.2 bits (132), Expect = 2e-08
Identities = 22/66 (33%), Positives = 41/66 (62%)
Frame = +3
Query: 12 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMK 191
++P+ TY S ++ +A+ ++ID +Q QS+ R GAPW+VR+ ++ DL + S+ +
Sbjct: 792 LKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVTNAIT 851
Query: 192 SASERY 209
E+Y
Sbjct: 852 ELKEKY 857
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 56.4 bits (130), Expect = 3e-08
Identities = 24/78 (30%), Positives = 43/78 (55%)
Frame = +3
Query: 9 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYM 188
C+ P+ Y ++ AA+++ + +Q LQ+R R P++VR LH DL L ++ + +
Sbjct: 804 CVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQI 863
Query: 189 KSASERYFDKAMRHDNRL 242
+ RY D+ RH + L
Sbjct: 864 SRHTSRYSDRLRRHHSIL 881
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 54.0 bits (124), Expect = 2e-07
Identities = 22/80 (27%), Positives = 47/80 (58%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 182
K+ + P + Y V+ AA++H++ ++ LQ++ R GAPW++R D+ DL + +
Sbjct: 801 KSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGD 860
Query: 183 YMKSASERYFDKAMRHDNRL 242
+++ +++Y ++ H N L
Sbjct: 861 KLQNIAQKYMERLNVHPNSL 880
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 54.0 bits (124), Expect = 2e-07
Identities = 22/80 (27%), Positives = 47/80 (58%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 182
K+ + P + Y V+ AA++H++ ++ LQ++ R GAPW++R D+ DL + +
Sbjct: 603 KSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGD 662
Query: 183 YMKSASERYFDKAMRHDNRL 242
+++ +++Y ++ H N L
Sbjct: 663 KLQNIAQKYLERLNVHPNSL 682
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 182
KT P++ Y S V+ A+THI LQ Q++ +L + P++ LH G++ +++
Sbjct: 821 KTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 880
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 182
KT P++ Y S V+ A+THI LQ Q++ +L + P++ LH G++ +++
Sbjct: 769 KTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 828
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 41.9 bits (94), Expect = 8e-04
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIR 179
K + P+ YA ++ + T +Q++++++ R + A + R D+ ++S
Sbjct: 859 KQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFD 918
Query: 180 KYMKSASERYFDKAMRHDNRLI--VAAADYSPN 272
+ AS+RY + H+N LI + Y PN
Sbjct: 919 EIFDKASQRYANSLTDHENPLIYDLLINAYKPN 951
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 41.9 bits (94), Expect = 8e-04
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIR 179
K + P+ YA ++ + T +Q++++++ R + A + R D+ ++S
Sbjct: 859 KQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFD 918
Query: 180 KYMKSASERYFDKAMRHDNRLI--VAAADYSPN 272
+ AS+RY + H+N LI + Y PN
Sbjct: 919 EIFDKASQRYANSLTDHENPLIYDLLINAYKPN 951
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 41.9 bits (94), Expect = 8e-04
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIR 179
K + P+ YA ++ + T +Q++++++ R + A + R D+ ++S
Sbjct: 859 KQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFD 918
Query: 180 KYMKSASERYFDKAMRHDNRLI--VAAADYSPN 272
+ AS+RY + H+N LI + Y PN
Sbjct: 919 EIFDKASQRYANSLTDHENPLIYDLLINAYKPN 951
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 41.5 bits (93), Expect = 0.001
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +3
Query: 3 KTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIR 179
K + P+ YA ++ + T +Q++++++ R + A + R D+ ++S
Sbjct: 412 KQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFD 471
Query: 180 KYMKSASERYFDKAMRHDNRLI--VAAADYSPN 272
+ AS+RY + H+N LI + Y PN
Sbjct: 472 ETFDKASQRYANSLTDHENPLIYDLLINAYKPN 504
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,817,529
Number of Sequences: 53049
Number of extensions: 532760
Number of successful extensions: 1194
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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