Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30094
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   2.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   2.8  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   4.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   8.4  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 350 CKGYWI*WIRKDVXRASTVTGSCMI 276
           CKG++   +RKD+  A     SC+I
Sbjct: 130 CKGFFKRTVRKDLSYACREEKSCII 154


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 350 CKGYWI*WIRKDVXRASTVTGSCMI 276
           CKG++   +RKD+  A     SC+I
Sbjct: 130 CKGFFKRTVRKDLSYACREEKSCII 154


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 177 RKYMKSASERYFDKAMRHDNRLIVAAADYSPNPDH 281
           RKY +++ ER  D+A R  +R     +  S N  H
Sbjct: 56  RKYRETSKERSRDRAERERSREPKIISSLSNNTIH 90


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 584 SHPSWLSLCSPTCPGETGKAF 646
           SH +W+   S T PG     F
Sbjct: 544 SHGNWIYPASMTIPGSNSAVF 564


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,743
Number of Sequences: 438
Number of extensions: 3149
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)