Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30093
(555 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical pr... 54 7e-08
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 54 7e-08
Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical pr... 54 7e-08
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 54 7e-08
Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 42 4e-04
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 38 0.004
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 37 0.011
U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical p... 37 0.011
U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical pr... 37 0.011
U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical pr... 37 0.011
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 36 0.020
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr... 32 0.24
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 32 0.24
AC024869-4|ABB51173.1| 285|Caenorhabditis elegans Hypothetical ... 32 0.24
Z66521-14|CAI70416.1| 245|Caenorhabditis elegans Hypothetical p... 31 0.42
Z66521-13|CAA91403.1| 444|Caenorhabditis elegans Hypothetical p... 31 0.42
U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defecti... 31 0.42
U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defecti... 31 0.42
U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defecti... 31 0.42
AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity... 31 0.42
AC199241-1|ABO33279.1| 343|Caenorhabditis elegans Hypothetical ... 29 3.0
Z72514-4|CAA96678.1| 204|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 27 9.1
AC024776-2|AAK68467.1| 400|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 54.0 bits (124), Expect = 7e-08
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = +1
Query: 244 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 423
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 176 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 231
Query: 424 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELH 531
D P+ A ++K ++ +LPE +LT EL+
Sbjct: 232 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELY 270
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 54.0 bits (124), Expect = 7e-08
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = +1
Query: 244 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 423
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 405 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 460
Query: 424 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELH 531
D P+ A ++K ++ +LPE +LT EL+
Sbjct: 461 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELY 499
>Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 54.0 bits (124), Expect = 7e-08
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = +1
Query: 244 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 423
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 176 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 231
Query: 424 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELH 531
D P+ A ++K ++ +LPE +LT EL+
Sbjct: 232 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELY 270
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 54.0 bits (124), Expect = 7e-08
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = +1
Query: 244 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 423
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 405 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 460
Query: 424 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELH 531
D P+ A ++K ++ +LPE +LT EL+
Sbjct: 461 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELY 499
>Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical
protein T23G11.5 protein.
Length = 512
Score = 48.0 bits (109), Expect = 5e-06
Identities = 27/94 (28%), Positives = 49/94 (52%)
Frame = +1
Query: 244 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 423
+ G+PL +SV D LP R +ID+++ +GL ++ IYR P K + +L +
Sbjct: 52 VLGLPLTESVSADPSLDGIPLPSFFRYAIDFVEENGLCTEGIYRLSPPKSRLDELERR-A 110
Query: 424 DRGPTFPYHWDVPVACAMLKAFISELPESILTQE 525
+ G + D A ++K F+ ++PE ++ E
Sbjct: 111 NCGEKMIFA-DAHDAAGLIKRFLRQIPEPVVPIE 143
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 41.5 bits (93), Expect = 4e-04
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Frame = +1
Query: 229 GVALPIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQL 408
G P+ GV + S C D +P++V+ + ++ +G+ + IYR + L
Sbjct: 774 GAPQPVLGVRIADCPTGS-CEDH--VPMIVQACVCVIETYGMDTVGIYRIPGNTAAVNAL 830
Query: 409 RKLFTDRG---------PTFPYHW-DVPVACAMLKAFISELPESILTQELH 531
++ ++RG + W DV V ++LK F+ +LPE +LT +L+
Sbjct: 831 KESLSNRGFDSVDLSKVESLDPRWRDVNVVSSLLKMFLRKLPEPLLTDKLY 881
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 41.5 bits (93), Expect = 4e-04
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Frame = +1
Query: 229 GVALPIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQL 408
G P+ GV + S C D +P++V+ + ++ +G+ + IYR + L
Sbjct: 652 GAPQPVLGVRIADCPTGS-CEDH--VPMIVQACVCVIETYGMDTVGIYRIPGNTAAVNAL 708
Query: 409 RKLFTDRG---------PTFPYHW-DVPVACAMLKAFISELPESILTQELH 531
++ ++RG + W DV V ++LK F+ +LPE +LT +L+
Sbjct: 709 KESLSNRGFDSVDLSKVESLDPRWRDVNVVSSLLKMFLRKLPEPLLTDKLY 759
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Frame = +1
Query: 211 EEIFTLGVALPIFGVPLQQ--SVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEP 384
E + + P+FGVPL + S+++ R V+ D+L+ +G+ + I+R
Sbjct: 227 ERMIATALPRPVFGVPLDEHLSIQKERISG------VLTKCCDFLRQNGMNERGIFRVSG 280
Query: 385 DKIKFQQLRKLFTDRG----PTFPYHWDVPVACAMLKAFISELPESILTQEL 528
+ K +++R D G Y+ D + LKA++ ELP+ + L
Sbjct: 281 NASKIKRIRAAL-DAGQFDADEKHYNNDPHAVASTLKAYLRELPDPLTMDSL 331
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 36.7 bits (81), Expect = 0.011
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 304 LPLVVRDSIDYLQAHG-LKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPYHWDVPV--ACA 474
+P+ + I +++ +G + + +YR ++ ++ K F G +D PV A
Sbjct: 1161 IPIYLEKCIQFIEQNGGFEQEGLYRVPGNQTHLAEVEKRFLKYGEFDVSSFDTPVHVAAT 1220
Query: 475 MLKAFISELPESILTQELH 531
LK+F S LPES++ H
Sbjct: 1221 ALKSFFSCLPESLIPTAYH 1239
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 36.7 bits (81), Expect = 0.011
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 304 LPLVVRDSIDYLQAHG-LKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPYHWDVPV--ACA 474
+P+ + I +++ +G + + +YR ++ ++ K F G +D PV A
Sbjct: 1161 IPIYLEKCIQFIEQNGGFEQEGLYRVPGNQTHLAEVEKRFLKYGEFDVSSFDTPVHVAAT 1220
Query: 475 MLKAFISELPESILTQELH 531
LK+F S LPES++ H
Sbjct: 1221 ALKSFFSCLPESLIPTAYH 1239
>U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical
protein T04C9.1c protein.
Length = 475
Score = 36.7 bits (81), Expect = 0.011
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Frame = +1
Query: 292 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPY-------- 447
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 66 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 124
Query: 448 HWDVPVACAMLKAFISELPESILTQELH 531
W+ + +K F+ LPE ++T ELH
Sbjct: 125 EWETKTISSAVKTFLRNLPEPLMTFELH 152
>U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical
protein T04C9.1b protein.
Length = 863
Score = 36.7 bits (81), Expect = 0.011
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Frame = +1
Query: 292 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPY-------- 447
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 406 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 464
Query: 448 HWDVPVACAMLKAFISELPESILTQELH 531
W+ + +K F+ LPE ++T ELH
Sbjct: 465 EWETKTISSAVKTFLRNLPEPLMTFELH 492
>U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical
protein T04C9.1a protein.
Length = 881
Score = 36.7 bits (81), Expect = 0.011
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Frame = +1
Query: 292 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPY-------- 447
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 406 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 464
Query: 448 HWDVPVACAMLKAFISELPESILTQELH 531
W+ + +K F+ LPE ++T ELH
Sbjct: 465 EWETKTISSAVKTFLRNLPEPLMTFELH 492
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 35.9 bits (79), Expect = 0.020
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 307 PLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPYH-WDVPVACAMLK 483
P + +D+L+ G ++ I+R P + F++L K D+G +H ++ V ++LK
Sbjct: 264 PQPIMTIVDHLRMDGFDAEGIFRKSPKQSTFKEL-KCELDKGVVPDFHKYNTHVLASILK 322
Query: 484 AFISELPESIL 516
++ +P IL
Sbjct: 323 EYLRSIPGKIL 333
>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
protein K09H11.3 protein.
Length = 1085
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 304 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGP-TFPYHWDVPVACAML 480
+P + ++ + + HG+ + I+R E + ++ + +G P + V C M+
Sbjct: 65 VPKFIVNAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQRDIPNDYSVIDVCTMV 124
Query: 481 KAFISELPESILTQE 525
K F+ +L +L E
Sbjct: 125 KRFLRDLKPPLLDSE 139
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 304 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPT-FPYHWDVPVACAML 480
+P + + + + HG+ + I+R E + ++ + +G + P + V C M+
Sbjct: 65 VPKFIVHAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQSDIPNDYSVIDVCTMV 124
Query: 481 KAFISELPESILTQE 525
K F+ +L +L E
Sbjct: 125 KRFLRDLKPPLLDSE 139
>AC024869-4|ABB51173.1| 285|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4b protein.
Length = 285
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 304 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPT-FPYHWDVPVACAML 480
+P + + + + HG+ + I+R E + ++ + +G + P + V C M+
Sbjct: 65 VPKFIVHAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQSDIPNDYSVIDVCTMV 124
Query: 481 KAFISELPESILTQE 525
K F+ +L +L E
Sbjct: 125 KRFLRDLKPPLLDSE 139
>Z66521-14|CAI70416.1| 245|Caenorhabditis elegans Hypothetical
protein W02B12.8b protein.
Length = 245
Score = 31.5 bits (68), Expect = 0.42
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Frame = +1
Query: 247 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPD--KIKFQQLR--- 411
FGVPL+ + H +P +V I+YL+AH L + ++R + IK Q R
Sbjct: 48 FGVPLEFILS----HCGGNIPPIVDQLIEYLEAHALTMEGVFRKSANIGSIKRLQDRINK 103
Query: 412 --KLFTDRGPTFPYHWDVPV--ACAMLKAFISELPESILTQELH 531
K+ + P + + V A +LK F L E + T L+
Sbjct: 104 GEKIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLY 147
>Z66521-13|CAA91403.1| 444|Caenorhabditis elegans Hypothetical
protein W02B12.8a protein.
Length = 444
Score = 31.5 bits (68), Expect = 0.42
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Frame = +1
Query: 247 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPD--KIKFQQLR--- 411
FGVPL+ + H +P +V I+YL+AH L + ++R + IK Q R
Sbjct: 247 FGVPLEFILS----HCGGNIPPIVDQLIEYLEAHALTMEGVFRKSANIGSIKRLQDRINK 302
Query: 412 --KLFTDRGPTFPYHWDVPV--ACAMLKAFISELPESILTQELH 531
K+ + P + + V A +LK F L E + T L+
Sbjct: 303 GEKIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLY 346
>U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defective
protein 1, isoformc protein.
Length = 721
Score = 31.5 bits (68), Expect = 0.42
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Frame = +1
Query: 244 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY----RTEPDKIKFQQLR 411
+FG+ L + V+R R DT P+V+ I ++ G+ +Y E K+ +L
Sbjct: 486 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 541
Query: 412 K--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELH 531
L T+ + P D V ++K F+ ELPE +++ ++H
Sbjct: 542 SNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIH 581
>U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defective
protein 1, isoformb protein.
Length = 942
Score = 31.5 bits (68), Expect = 0.42
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Frame = +1
Query: 244 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY----RTEPDKIKFQQLR 411
+FG+ L + V+R R DT P+V+ I ++ G+ +Y E K+ +L
Sbjct: 684 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 739
Query: 412 K--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELH 531
L T+ + P D V ++K F+ ELPE +++ ++H
Sbjct: 740 SNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIH 779
>U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defective
protein 1, isoforma protein.
Length = 987
Score = 31.5 bits (68), Expect = 0.42
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Frame = +1
Query: 244 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY----RTEPDKIKFQQLR 411
+FG+ L + V+R R DT P+V+ I ++ G+ +Y E K+ +L
Sbjct: 752 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 807
Query: 412 K--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELH 531
L T+ + P D V ++K F+ ELPE +++ ++H
Sbjct: 808 SNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIH 847
>AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity
specification proteinSYD-1 protein.
Length = 942
Score = 31.5 bits (68), Expect = 0.42
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Frame = +1
Query: 244 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY----RTEPDKIKFQQLR 411
+FG+ L + V+R R DT P+V+ I ++ G+ +Y E K+ +L
Sbjct: 684 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 739
Query: 412 K--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELH 531
L T+ + P D V ++K F+ ELPE +++ ++H
Sbjct: 740 SNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIH 779
>AC199241-1|ABO33279.1| 343|Caenorhabditis elegans Hypothetical
protein 2RSSE.1 protein.
Length = 343
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/93 (22%), Positives = 45/93 (48%)
Frame = +1
Query: 247 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTD 426
FGVP+ ++ HD +P + + + G KDI+R ++ + ++L ++
Sbjct: 28 FGVPINEAF----AHD---IPATLLMLLLKVNKDGPAKKDIWRAPGNQAQVRKLSQVMQH 80
Query: 427 RGPTFPYHWDVPVACAMLKAFISELPESILTQE 525
++ V A +++K F+S+LP I ++
Sbjct: 81 GRLVNIENFTVYTAASVIKKFLSKLPNGIFGRD 113
>Z72514-4|CAA96678.1| 204|Caenorhabditis elegans Hypothetical
protein T10B10.6 protein.
Length = 204
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -1
Query: 459 NVPVIRECRPSIREQLPQLLKLYL 388
++P+IRE P IRE LP L++ YL
Sbjct: 121 SLPLIRESLPLIRESLP-LIRQYL 143
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 304 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQ-LRKLFTDRGPTFPYH 450
+P++V I ++ A+G+K + IYR + + L KL D +P H
Sbjct: 585 IPVIVDKCIRFVSAYGMKCEGIYRRNGKVTEAKTILTKLTEDPVGYYPVH 634
>AC024776-2|AAK68467.1| 400|Caenorhabditis elegans Hypothetical
protein Y41D4B.17 protein.
Length = 400
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = -2
Query: 386 SGSVRYISLDFNPCACK*SMLSRTTSGRPVSSWQRERSTDCCSGTPNIGSATPNVKISSK 207
+GS Y+ P A S ++ T++GR VS Q S SG N S ++ IS+
Sbjct: 37 NGSKLYLCSSDGPIAL--SKITVTSNGRTVSLDQLLVS----SGFLNGWSVNSDLTISTS 90
Query: 206 GTPDVT 189
TPDVT
Sbjct: 91 NTPDVT 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,227,501
Number of Sequences: 27780
Number of extensions: 205158
Number of successful extensions: 619
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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