Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30091
(659 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g60740.1 68414.m06838 peroxiredoxin type 2, putative strong s... 116 1e-26
At1g65980.1 68414.m07486 peroxiredoxin type 2, putative strong s... 116 1e-26
At1g65970.1 68414.m07485 peroxiredoxin type 2, putative strong s... 116 2e-26
At3g52960.1 68416.m05838 peroxiredoxin type 2, putative similar ... 107 9e-24
At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol sp... 96 2e-20
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 84 9e-17
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 39 0.003
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 32 0.29
At3g20860.1 68416.m02637 protein kinase family protein contains ... 31 0.68
At5g46250.2 68418.m05694 RNA recognition motif (RRM)-containing ... 30 1.6
At5g46250.1 68418.m05693 RNA recognition motif (RRM)-containing ... 30 1.6
At3g02890.1 68416.m00284 PHD finger protein-related contains low... 29 3.6
At1g55320.1 68414.m06319 acyl-activating enzyme 18 (AAE18) nearl... 29 3.6
At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger) fa... 28 6.3
>At1g60740.1 68414.m06838 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 116 bits (280), Expect = 1e-26
Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Frame = +3
Query: 159 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 329
MAPI VGD +P + E+ V++ + AGKKV+LF VPGAFTP CS +H+PG++
Sbjct: 1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFI 60
Query: 330 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAHHNTKGKVRMLADPSGNFIKALDLGTNL 503
A++LKS G+ EI+C SVNDP+VM AWG + V+ +AD SG + L L +L
Sbjct: 61 GKAEELKSKGIDEIICFSVNDPFVMKAWGKTYQENKHVKFVADGSGEYTHLLGLELDL 118
>At1g65980.1 68414.m07486 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 116 bits (279), Expect = 1e-26
Identities = 56/118 (47%), Positives = 75/118 (63%), Gaps = 3/118 (2%)
Frame = +3
Query: 159 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 329
MAPI VGD +P + E+ ++ L AGKKV+LF VPGAFTP CS H+PG++
Sbjct: 1 MAPIAVGDVVPDGTISFFDENDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFI 60
Query: 330 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAHHNTKGKVRMLADPSGNFIKALDLGTNL 503
+ A++LKS GV EI+C SVNDP+VM AWG + V+ +AD SG + L L +L
Sbjct: 61 EKAEELKSKGVDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDL 118
>At1g65970.1 68414.m07485 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 116 bits (278), Expect = 2e-26
Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Frame = +3
Query: 159 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 329
MAPI VGD +P + E+ V++ + AGKKV+LF VPGAFTP CS +H+PG++
Sbjct: 1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFI 60
Query: 330 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAHHNTKGKVRMLADPSGNFIKALDLGTNL 503
A++LKS G+ EI+C SVNDP+VM AWG + V+ +AD SG + L L +L
Sbjct: 61 GKAEELKSKGIDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDL 118
>At3g52960.1 68416.m05838 peroxiredoxin type 2, putative similar to
type 2 peroxiredoxin [Brassica rapa subsp. pekinensis]
GI:4928472; contains Pfam profile: PF00578 AhpC/TSA
(alkyl hydroperoxide reductase and thiol-specific
antioxidant) family
Length = 234
Score = 107 bits (256), Expect = 9e-24
Identities = 58/135 (42%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Frame = +3
Query: 114 TNRASARALHISQLSM-APIKVGDQLPAADLFEDSPAN----KVNICELTAGKKVVLFAV 278
TN ASA + + A I VGD+LP + L P+ V + LTAGKK +LFAV
Sbjct: 54 TNSASATTRSFATTPVTASISVGDKLPDSTLSYLDPSTGDVKTVTVSSLTAGKKTILFAV 113
Query: 279 PGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAHHNTKGKVRMLAD 458
PGAFTP CS+ H+PG+V A +L+S G+ I C+SVND +VM AW +V +L+D
Sbjct: 114 PGAFTPTCSQKHVPGFVSKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSD 173
Query: 459 PSGNFIKALDLGTNL 503
+G F L + +L
Sbjct: 174 GNGEFTGKLGVELDL 188
>At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol
specific antioxidant / mal allergen family protein
similar to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profiles PF00646:
F-box domain, PF00578: AhpC/TSA family
Length = 553
Score = 95.9 bits (228), Expect = 2e-20
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Frame = +3
Query: 159 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 329
MAPI VGD +P + +D V++ L AGKKV+LF VPGAF P CS H+ G++
Sbjct: 1 MAPIDVGDFVPDGSISFFDDDDQLQTVSVHSLAAGKKVILFGVPGAFPPTCSMNHVNGFI 60
Query: 330 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAHHNTKGKVRMLADPSGNFIKALDL 491
+ A++LKS+GV EI+C+S +DP+++ A + + V+ + D SG +I+ L L
Sbjct: 61 EKAEELKSNGVDEIICLSGDDPFMITACSENKH----VKFVEDGSGEYIQLLGL 110
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 83.8 bits (198), Expect = 9e-17
Identities = 35/90 (38%), Positives = 53/90 (58%)
Frame = +3
Query: 234 ICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAW 413
+ ++ GKKVV+F +PGA+T CS+ H+P Y + DK K+ G+ ++CVSVNDP+ + W
Sbjct: 67 LSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDPFAINGW 126
Query: 414 GAHHNTKGKVRMLADPSGNFIKALDLGTNL 503
K + D G F K+L L +L
Sbjct: 127 AEKLGAKDAIEFYGDFDGKFHKSLGLDKDL 156
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Frame = +3
Query: 159 MAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNA 338
M I +GD +P ++ ++ +K + + A VLF+ PG FTP C+ T L + A
Sbjct: 1 MPGITLGDTVPNLEV--ETTHDKFKLHDYFANSWTVLFSHPGDFTPVCT-TELGAMAKYA 57
Query: 339 DKLKSDGVAEIVCVSVNDPYVMAAW-----GAHHNTKGKVRMLADPSGNFIKALDL 491
+ GV +++ +S +D W +H +K ++ADP+ I L++
Sbjct: 58 HEFDKRGV-KLLGLSCDDVQSHKDWIKDIEAFNHGSKVNYPIIADPNKEIIPQLNM 112
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 32.3 bits (70), Expect = 0.29
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +3
Query: 153 LSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQ 332
L A + G P L +D V++ + GK VVL+ P TPGC+K +
Sbjct: 64 LIFAKVNKGQAAPDFTL-KDQNGKPVSLKKYK-GKPVVLYFYPADETPGCTK-QACAFRD 120
Query: 333 NADKLKSDGVAEIVCVSVND 392
+ +K K G AE++ +S +D
Sbjct: 121 SYEKFKKAG-AEVIGISGDD 139
>At3g20860.1 68416.m02637 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 427
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/54 (27%), Positives = 33/54 (61%)
Frame = -1
Query: 617 SAREQDRPVPSGSTFRSWTLLSTMTIENLLERKPPKRRQIGAQVQSLDEVAAGI 456
S+++++RP S + +++ST+T+ ++K PK + ++SL E+ AG+
Sbjct: 330 SSKDKERPAKS----QEMSVISTLTLLREFQKKSPKSEERAEALESLLELCAGL 379
>At5g46250.2 68418.m05694 RNA recognition motif (RRM)-containing
protein contains similarity to RNA-binding protein;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 420
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 401 DGGLGSSSQH*RKGAYASRSQRQLHQGSGPGHQSAAAS 514
DGG ++ KG + +RQ HQG G GH +A++S
Sbjct: 338 DGGNHQKDKNGNKGRVVGQGRRQNHQG-GNGHGTASSS 374
>At5g46250.1 68418.m05693 RNA recognition motif (RRM)-containing
protein contains similarity to RNA-binding protein;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 422
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 401 DGGLGSSSQH*RKGAYASRSQRQLHQ-GSGPGHQSAAAS 514
DGG ++ KG + +RQ HQ G+G GH +A++S
Sbjct: 338 DGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSS 376
>At3g02890.1 68416.m00284 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 963
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -2
Query: 343 LSAFCTYPGKCVLEHPGVKAPGTANNTT 260
L++ C++ G +L GV APG+++NT+
Sbjct: 48 LASQCSFNGDNLLRSSGVNAPGSSHNTS 75
>At1g55320.1 68414.m06319 acyl-activating enzyme 18 (AAE18) nearly
identical to acyl-activating enzyme 18 [Arabidopsis
thaliana] GI:29893268; similar to acetyl-CoA synthetase
[SP|P27095] from Methanothrix soehngenii; contains Pfam
AMP-binding enzyme domain PF00501l; identical to cDNA
acyl-activating enzyme 18 (At1g55320) GI: 29893267
Length = 725
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 204 FEDSPANKVNICELTAGKKVVLFAVPGAFTPG 299
F+DSP N++ I EL +V A+ G+F G
Sbjct: 199 FDDSPVNRMTIKELREQVMLVANAISGSFEKG 230
>At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 492
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 449 ASRSQRQLHQGSGPGHQSAA--ASEVSAPKGSRWSSLT 556
A+ QR+LHQGS G S+ SE+S+ G +SL+
Sbjct: 342 AAPGQRELHQGSQQGTSSSGNQGSEISSSAGVSNNSLS 379
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,498,281
Number of Sequences: 28952
Number of extensions: 323427
Number of successful extensions: 897
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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