Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30089
         (563 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    40   0.053
UniRef50_P41754 Cluster: Putative cutinase; n=1; Phytophthora ca...    34   2.0  
UniRef50_Q7R8W9 Cluster: Regulator of chromosome condensation, p...    32   8.1  

>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep:
          Like moricin - Manduca sexta (Tobacco hawkmoth)
          (Tobacco hornworm)
          Length = 248

 Score = 39.5 bits (88), Expect = 0.053
 Identities = 16/20 (80%), Positives = 16/20 (80%)
 Frame = +1

Query: 10 MGDGNHSPSGGPYAGLPASA 69
          MGDGNHSPSG PYA LP  A
Sbjct: 1  MGDGNHSPSGRPYASLPTRA 20


>UniRef50_P41754 Cluster: Putative cutinase; n=1; Phytophthora
           capsici|Rep: Putative cutinase - Phytophthora capsici
          Length = 210

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 254 CRLQEQ*ETNRSEAI*WPTPVNIFVECLSSLSIANLCVLSMYDLYPP 114
           CR  +  E   S +  W T  N+F+ CL  L +  L V  M+D++ P
Sbjct: 68  CRRYQHGEAVASSSTRWRTKWNLFIICLLLLCLPGLAVRYMHDMFSP 114


>UniRef50_Q7R8W9 Cluster: Regulator of chromosome condensation,
           putative; n=2; Plasmodium (Vinckeia)|Rep: Regulator of
           chromosome condensation, putative - Plasmodium yoelii
           yoelii
          Length = 870

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -3

Query: 426 LKLRHLITVELNT-ENKILKIICTSLYLL*INRLNFINVW 310
           L  ++LI + +N   NKI KI+C + Y+L +N L ++  W
Sbjct: 711 LNKKYLIPININICVNKITKIVCGNDYVLALNDLGYVYGW 750


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,523,105
Number of Sequences: 1657284
Number of extensions: 9202572
Number of successful extensions: 13933
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13933
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)