Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30088
(630 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43588-1|AAC46972.1| 395|Drosophila melanogaster geranylgeranyl... 83 2e-16
U43587-1|AAC46971.1| 395|Drosophila melanogaster geranylgeranyl... 83 2e-16
AY119246-1|AAM51106.1| 395|Drosophila melanogaster SD20823p pro... 83 2e-16
AE014134-811|AAF52177.1| 395|Drosophila melanogaster CG3469-PA ... 83 2e-16
BT001562-1|AAN71317.1| 753|Drosophila melanogaster RE14391p pro... 29 6.9
AE014296-1245|AAF50571.1| 753|Drosophila melanogaster CG8583-PA... 29 6.9
X62575-1|CAA44453.1| 147|Drosophila melanogaster ubiquitin-conj... 28 9.1
AY060607-1|AAL28155.1| 858|Drosophila melanogaster GH02677p pro... 28 9.1
AY060304-1|AAL25343.1| 147|Drosophila melanogaster GH14739p pro... 28 9.1
AE014297-1892|AAF55093.1| 147|Drosophila melanogaster CG7425-PA... 28 9.1
AE014297-1322|AAF54657.2| 897|Drosophila melanogaster CG6790-PA... 28 9.1
>U43588-1|AAC46972.1| 395|Drosophila melanogaster geranylgeranyl
transferase beta-subunit type I protein.
Length = 395
Score = 83.4 bits (197), Expect = 2e-16
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Frame = +1
Query: 241 QHVKYFMRFLNILPSSLSSHDTTRVTIAYFSVAGLDVLGSISAISLDLRSRIIEWLYRLQ 420
+H K +RFLN+LP+ ++SHD TR TI +F+V GLDVL S+ + LR II+W+Y
Sbjct: 14 KHAKNLLRFLNLLPARMASHDNTRSTIVFFAVCGLDVLNSLHLVPPQLRQDIIDWIYGGL 73
Query: 421 VHP---DKETGDMSLCGFQGSSTINIRLDPDNNQFRCGHLAMTYTGSVYTAGVG 573
V P +K G C T + + ++ GHLAMTYT +G
Sbjct: 74 VVPRDNEKNCGGFMGCRAMVPKTEDAEILECMRNYQWGHLAMTYTSLAVLVTLG 127
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 551 LCILLALGDDLSRINRTALIQXVKAL 628
L +L+ LGDDLSR++R +++ V A+
Sbjct: 120 LAVLVTLGDDLSRLDRKSIVDGVAAV 145
>U43587-1|AAC46971.1| 395|Drosophila melanogaster geranylgeranyl
transferase beta-subunit type I protein.
Length = 395
Score = 83.4 bits (197), Expect = 2e-16
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Frame = +1
Query: 241 QHVKYFMRFLNILPSSLSSHDTTRVTIAYFSVAGLDVLGSISAISLDLRSRIIEWLYRLQ 420
+H K +RFLN+LP+ ++SHD TR TI +F+V GLDVL S+ + LR II+W+Y
Sbjct: 14 KHAKNLLRFLNLLPARMASHDNTRSTIVFFAVCGLDVLNSLHLVPPQLRQDIIDWIYGGL 73
Query: 421 VHP---DKETGDMSLCGFQGSSTINIRLDPDNNQFRCGHLAMTYTGSVYTAGVG 573
V P +K G C T + + ++ GHLAMTYT +G
Sbjct: 74 VVPRDNEKNCGGFMGCRAMVPKTEDAEILECMRNYQWGHLAMTYTSLAVLVTLG 127
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 551 LCILLALGDDLSRINRTALIQXVKAL 628
L +L+ LGDDLSR++R +++ V A+
Sbjct: 120 LAVLVTLGDDLSRLDRKSIVDGVAAV 145
>AY119246-1|AAM51106.1| 395|Drosophila melanogaster SD20823p
protein.
Length = 395
Score = 83.4 bits (197), Expect = 2e-16
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Frame = +1
Query: 241 QHVKYFMRFLNILPSSLSSHDTTRVTIAYFSVAGLDVLGSISAISLDLRSRIIEWLYRLQ 420
+H K +RFLN+LP+ ++SHD TR TI +F+V GLDVL S+ + LR II+W+Y
Sbjct: 14 KHAKNLLRFLNLLPARMASHDNTRSTIVFFAVCGLDVLNSLHLVPPQLRQDIIDWIYGGL 73
Query: 421 VHP---DKETGDMSLCGFQGSSTINIRLDPDNNQFRCGHLAMTYTGSVYTAGVG 573
V P +K G C T + + ++ GHLAMTYT +G
Sbjct: 74 VVPRDNEKNCGGFMGCRAMVPKTEDAEILECMRNYQWGHLAMTYTSLAVLVTLG 127
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 551 LCILLALGDDLSRINRTALIQXVKAL 628
L +L+ LGDDLSR++R +++ V A+
Sbjct: 120 LAVLVTLGDDLSRLDRKSIVDGVAAV 145
>AE014134-811|AAF52177.1| 395|Drosophila melanogaster CG3469-PA
protein.
Length = 395
Score = 83.4 bits (197), Expect = 2e-16
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Frame = +1
Query: 241 QHVKYFMRFLNILPSSLSSHDTTRVTIAYFSVAGLDVLGSISAISLDLRSRIIEWLYRLQ 420
+H K +RFLN+LP+ ++SHD TR TI +F+V GLDVL S+ + LR II+W+Y
Sbjct: 14 KHAKNLLRFLNLLPARMASHDNTRSTIVFFAVCGLDVLNSLHLVPPQLRQDIIDWIYGGL 73
Query: 421 VHP---DKETGDMSLCGFQGSSTINIRLDPDNNQFRCGHLAMTYTGSVYTAGVG 573
V P +K G C T + + ++ GHLAMTYT +G
Sbjct: 74 VVPRDNEKNCGGFMGCRAMVPKTEDAEILECMRNYQWGHLAMTYTSLAVLVTLG 127
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 551 LCILLALGDDLSRINRTALIQXVKAL 628
L +L+ LGDDLSR++R +++ V A+
Sbjct: 120 LAVLVTLGDDLSRLDRKSIVDGVAAV 145
>BT001562-1|AAN71317.1| 753|Drosophila melanogaster RE14391p
protein.
Length = 753
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 304 TTRVTIAYFSVAGLDVLGSISAISLDLRSRIIEWLYRLQ--VHPDKETGD 447
T RV+ + +A D ++ ++ I + YRL +HPDKETGD
Sbjct: 91 TYRVSQFDYEMASFDPFEILNVPPTSSQAEIKKAYYRLSKVLHPDKETGD 140
>AE014296-1245|AAF50571.1| 753|Drosophila melanogaster CG8583-PA
protein.
Length = 753
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 304 TTRVTIAYFSVAGLDVLGSISAISLDLRSRIIEWLYRLQ--VHPDKETGD 447
T RV+ + +A D ++ ++ I + YRL +HPDKETGD
Sbjct: 91 TYRVSQFDYEMASFDPFEILNVPPTSSQAEIKKAYYRLSKVLHPDKETGD 140
>X62575-1|CAA44453.1| 147|Drosophila melanogaster
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -2
Query: 590 FSTGHRPTPAVYTDP-VYVIARWPHRN*LLSGSSLMFIVEEPWKPHSDMSPVSLSGCT 420
F T H PT + P V R H N +GS + I+ W P +S V LS C+
Sbjct: 51 FLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICS 108
>AY060607-1|AAL28155.1| 858|Drosophila melanogaster GH02677p
protein.
Length = 858
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 277 LPSSLSSHDTTRVTIAYFSVAGLDVLGSISAISLDLRSRIIEWLYRLQVHPDKETGD 447
+P S + +R+ + F++ L VL S S +SL + IIE+ L+VH + D
Sbjct: 624 VPCSSRTTPQSRLELIRFNLLTLHVLLSDSYVSLFAQGLIIEYQMGLEVHEKFKEAD 680
>AY060304-1|AAL25343.1| 147|Drosophila melanogaster GH14739p
protein.
Length = 147
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -2
Query: 590 FSTGHRPTPAVYTDP-VYVIARWPHRN*LLSGSSLMFIVEEPWKPHSDMSPVSLSGCT 420
F T H PT + P V R H N +GS + I+ W P +S V LS C+
Sbjct: 51 FLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICS 108
>AE014297-1892|AAF55093.1| 147|Drosophila melanogaster CG7425-PA
protein.
Length = 147
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -2
Query: 590 FSTGHRPTPAVYTDP-VYVIARWPHRN*LLSGSSLMFIVEEPWKPHSDMSPVSLSGCT 420
F T H PT + P V R H N +GS + I+ W P +S V LS C+
Sbjct: 51 FLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICS 108
>AE014297-1322|AAF54657.2| 897|Drosophila melanogaster CG6790-PA
protein.
Length = 897
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 277 LPSSLSSHDTTRVTIAYFSVAGLDVLGSISAISLDLRSRIIEWLYRLQVHPDKETGD 447
+P S + +R+ + F++ L VL S S +SL + IIE+ L+VH + D
Sbjct: 663 VPCSSRTTPQSRLELIRFNLLTLHVLLSDSYVSLFAQGLIIEYQMGLEVHEKFKEAD 719
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,039,364
Number of Sequences: 53049
Number of extensions: 551140
Number of successful extensions: 1279
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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