Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30085
         (312 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_49095| Best HMM Match : UBX (HMM E-Value=0.26)                      26   5.4  
SB_23681| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   5.4  
SB_51209| Best HMM Match : UBX (HMM E-Value=0.5)                       26   7.2  
SB_46364| Best HMM Match : DUF22 (HMM E-Value=3.1)                     26   7.2  
SB_3312| Best HMM Match : No HMM Matches (HMM E-Value=.)               26   7.2  
SB_2793| Best HMM Match : UBX (HMM E-Value=0.32)                       26   7.2  
SB_9160| Best HMM Match : EGF (HMM E-Value=0.0019)                     25   9.5  
SB_44777| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.5  

>SB_49095| Best HMM Match : UBX (HMM E-Value=0.26)
          Length = 267

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 147 FDS*HIFKCCKSSIHYVDEAQPKDISFIVTSCSINQRPLLYCDVGL 284
           + S  I + C   ++ V   QP  +S    S +IN    LY D+ +
Sbjct: 171 YPSDEISQACNEILNVVSRGQPVPLSVEEDSVTINDGQKLYIDIDM 216


>SB_23681| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 634

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 147 FDS*HIFKCCKSSIHYVDEAQPKDISFIVTSCSINQRPLLYCDVGL 284
           + S  I + C   ++ V   QP  +S    S +IN    LY D+ +
Sbjct: 209 YPSDEISQACNEILNVVSRGQPVPLSVEEDSVTINDGQKLYIDIDM 254


>SB_51209| Best HMM Match : UBX (HMM E-Value=0.5)
          Length = 272

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 147 FDS*HIFKCCKSSIHYVDEAQPKDISFIVTSCSINQRPLLYCDVGL 284
           + S  I + C   ++ V   QP  +S    S +IN    LY D+ +
Sbjct: 151 YPSDEISQACNEILNVVSRGQPVPLSVEEDSVTINDGRKLYIDIDM 196


>SB_46364| Best HMM Match : DUF22 (HMM E-Value=3.1)
          Length = 205

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 147 FDS*HIFKCCKSSIHYVDEAQPKDISFIVTSCSINQRPLLYCDVGL 284
           + S  I + C   ++ V   QP  +S    S +IN    LY D+ +
Sbjct: 109 YPSDEISQACNEILNVVSRGQPVPLSVEEDSVTINDGRKLYIDIDM 154


>SB_3312| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 769

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 147 FDS*HIFKCCKSSIHYVDEAQPKDISFIVTSCSINQRPLLYCDVGL 284
           + S  I + C   ++ V   QP  +S    S +IN    LY D+ +
Sbjct: 344 YPSDEISQACNEILNVVSRGQPVPLSVEEDSVTINDGRKLYIDIDM 389


>SB_2793| Best HMM Match : UBX (HMM E-Value=0.32)
          Length = 311

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 147 FDS*HIFKCCKSSIHYVDEAQPKDISFIVTSCSINQRPLLYCDVGL 284
           + S  I + C   ++ V   QP  +S    S +IN    LY D+ +
Sbjct: 171 YPSDEISQACNEILNVVSRGQPVPLSVEEDSVTINDGRKLYIDIDM 216


>SB_9160| Best HMM Match : EGF (HMM E-Value=0.0019)
          Length = 497

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 1   INPCCSAHCTKFMIFSSVFA 60
           +N   + H TKF+I SS+FA
Sbjct: 364 VNSIIALHLTKFLIVSSLFA 383


>SB_44777| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 641

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 1   INPCCSAHCTKFMIFSSVFA 60
           +N   + H TKF+I SS+FA
Sbjct: 143 VNSIIALHLTKFLIVSSLFA 162


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,723,514
Number of Sequences: 59808
Number of extensions: 143661
Number of successful extensions: 320
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 320
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 387973711
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)