Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30084
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    24   3.7  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   6.5  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   8.5  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   8.5  

>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 254 IVIICVLFIYARTSNEKCVIT 192
           I++ CVLF+ A   N   VIT
Sbjct: 80  IIVYCVLFVIAAGGNLSVVIT 100


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 506  YSLCRIHESCFTNCDTYDSFS 444
            +S   I  +C  NCD YD+ S
Sbjct: 1255 HSYATIGPNCPRNCDNYDTVS 1275


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -2

Query: 260 MYIVIICVLFIYARTS 213
           +Y++++C+L IY + S
Sbjct: 3   LYLIVLCLLVIYIKDS 18


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -2

Query: 260 MYIVIICVLFIYARTS 213
           +Y++++C+L IY + S
Sbjct: 3   LYLIVLCLLVIYIKDS 18


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,456
Number of Sequences: 2352
Number of extensions: 11121
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)