Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30081
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   0.87 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   4.6  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.1  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 0.87
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 352 LYQYPHLLLYFGFSCPFSL 296
           L  YPHL  +F FS P ++
Sbjct: 351 LNTYPHLFNFFEFSVPLAI 369


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 513 SSIVLFALIPNSTSRNFCKAIFFSMS 436
           + I +F  I +++ RNF  A FF ++
Sbjct: 290 NEIKMFVKIVDASCRNFTAARFFELN 315


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 262 FPWPLIFLT 236
           F WPL+F+T
Sbjct: 236 FGWPLVFIT 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,331
Number of Sequences: 336
Number of extensions: 1657
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)