Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30081
         (610 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK097424-1|BAC05045.1|  535|Homo sapiens protein ( Homo sapiens ...    30   7.3  
BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    29   9.7  
AK097297-1|BAC04995.1|  261|Homo sapiens protein ( Homo sapiens ...    29   9.7  

>AK097424-1|BAC05045.1|  535|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40105 fis, clone TESTI2006383. ).
          Length = 535

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = +2

Query: 449 KIALQKFLEVELGISAKSTIEERNQAILDFVTKISVNTQTKDVAQKNLFDKL 604
           K+  +K +EVEL  +    +EE N  +   VT++   T+  D  ++ + D+L
Sbjct: 308 KLEREKAIEVELLNARVQQLEEENTELRTTVTRLKSQTEKLDEERQRMSDRL 359


>BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 46 protein.
          Length = 1031

 Score = 29.5 bits (63), Expect = 9.7
 Identities = 16/57 (28%), Positives = 33/57 (57%)
 Frame = +2

Query: 437  DIEKKIALQKFLEVELGISAKSTIEERNQAILDFVTKISVNTQTKDVAQKNLFDKLN 607
            +I K++AL+   +  LGI ++  +++   AIL   T ++     K +A++ L +K+N
Sbjct: 850  EIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQ-LAEKIN 905


>AK097297-1|BAC04995.1|  261|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39978 fis, clone SPLEN2029380. ).
          Length = 261

 Score = 29.5 bits (63), Expect = 9.7
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = -1

Query: 334 LLLYFGFSCPFSLVSFCHLFQASFFPWPLIFLTSCLPSPIFFPACINFQY 185
           L LY G    FS VS C          P I L++CL + +F P C  F Y
Sbjct: 29  LCLYLGICLTFS-VSLC----------PCIVLSACLSASLFLPPCCVFHY 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,648,164
Number of Sequences: 237096
Number of extensions: 843498
Number of successful extensions: 1512
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1512
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)