Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30081
         (610 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z92813-5|CAB07285.1|  425|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z77133-6|CAB00869.1|  338|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z69794-6|CAA93683.1|  338|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical
           protein Y53C12B.1 protein.
          Length = 793

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +2

Query: 479 ELGISAKSTIEERNQAILDFVTKISVNTQTKDVAQKNLFDKLNI 610
           ELG + +     + + +L F  K + N++T  VAQ+ L++ ++I
Sbjct: 699 ELGSAIRRLDTRQIEILLQFTVKWNTNSRTSSVAQRVLYEIVHI 742


>Z92813-5|CAB07285.1|  425|Caenorhabditis elegans Hypothetical
           protein T28A8.5 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 388 EYRHSRIH*NPGLYQYPHLLLYFGFSCPFS 299
           + RH+     P L  +  +L++FGF C FS
Sbjct: 234 DQRHTPSSSRPALLHFTLILIFFGFICLFS 263


>Z77133-6|CAB00869.1|  338|Caenorhabditis elegans Hypothetical
           protein R03G8.5 protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 361 NPGLYQYPHLLLYFGFSCPFSLVSFCHLFQAS 266
           NP ++ Y    +YF  S PF  V +  L+ A+
Sbjct: 67  NPNMFSYNSGTIYFTLSKPFGFVVYTGLYSAT 98


>Z69794-6|CAA93683.1|  338|Caenorhabditis elegans Hypothetical
           protein R03G8.5 protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 361 NPGLYQYPHLLLYFGFSCPFSLVSFCHLFQAS 266
           NP ++ Y    +YF  S PF  V +  L+ A+
Sbjct: 67  NPNMFSYNSGTIYFTLSKPFGFVVYTGLYSAT 98


>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
            C16A3.3 protein.
          Length = 1743

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +2

Query: 467  FLEVELGISAKSTIEERNQAILDFVTKISVNTQTKDVAQKNLFDKLN 607
            F+E+  G+S +  + E NQ +L+  T   +      VA+  +  KL+
Sbjct: 1306 FIELGPGVSGRIPVNEENQDLLEIGTNSVIRVTVVKVAKNEITLKLD 1352


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,306,592
Number of Sequences: 27780
Number of extensions: 146516
Number of successful extensions: 399
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)