Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30080
(674 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory recept... 23 3.0
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 4.0
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 22 5.3
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 22 5.3
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 22 5.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.0
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 7.0
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 7.0
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 21 9.2
>AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory receptor
candidate 42 protein.
Length = 347
Score = 22.6 bits (46), Expect = 3.0
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 174 LSFVYNLISVKFQDFNYNIVTNWNSVYLIQIIGPACTYILL 296
+S N++ + DF+ + N L+QIIG T+ ++
Sbjct: 299 ISEFINVVLNNYPDFSAAGFFSINKTTLLQIIGNVTTFFII 339
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3
Query: 252 YLIQIIGPACTYILL 296
+L+QIIG TYI++
Sbjct: 1427 FLLQIIGGVTTYIII 1441
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 457 LHLHVHNYVKSFREI 501
LH H+ +KSF EI
Sbjct: 1307 LHHHLSKLIKSFNEI 1321
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -2
Query: 538 YAIQNTCRFSKCIFHENFLHN 476
+ +QN F C FH+ +N
Sbjct: 74 FTVQNILTFLSCRFHQGASYN 94
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 335 INHFNEHQTKIDFSF 379
+NH NE K+ F+F
Sbjct: 43 LNHLNEEPEKLHFTF 57
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3
Query: 162 FINYLSFVYNLISVKFQDFNYNIVTNWNSVY 254
FIN +NLI +K +N + WN ++
Sbjct: 131 FINLPFLEHNLIRLKNCVIYFNRIFGWNILF 161
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 159 QFINYLSFVYNLISVKF 209
Q N+ SF YN+I + F
Sbjct: 940 QIDNWTSFYYNIIPILF 956
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 159 QFINYLSFVYNLISVKF 209
Q N+ SF YN+I + F
Sbjct: 940 QIDNWTSFYYNIIPILF 956
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 159 QFINYLSFVYNLISVKF 209
Q N+ SF YN+I + F
Sbjct: 940 QIDNWTSFYYNIIPILF 956
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 159 QFINYLSFVYNLISVKF 209
Q N+ SF YN+I + F
Sbjct: 940 QIDNWTSFYYNIIPILF 956
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 420 DTACVVYTHNLF 385
DT V+YT NLF
Sbjct: 311 DTLVVIYTFNLF 322
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 420 DTACVVYTHNLF 385
DT V+YT NLF
Sbjct: 267 DTLVVIYTFNLF 278
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 511 SKCIFHENFLHNYVHVN 461
S C ++N HNY H N
Sbjct: 27 SDCDKNQNTEHNYTHNN 43
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,012
Number of Sequences: 336
Number of extensions: 2757
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -