Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30072
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 208 2e-54
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 208 2e-54
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 208 2e-54
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 208 2e-54
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 192 1e-49
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 192 1e-49
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 80 9e-16
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 80 9e-16
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 33 0.11
AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical ... 32 0.25
AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical ... 32 0.25
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 30 1.3
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 29 2.3
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 29 2.3
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 3.1
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 29 3.1
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 3.1
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 3.1
Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical pr... 28 4.0
U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 28 4.0
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 28 4.0
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 28 5.3
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 28 5.3
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 28 5.3
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 28 5.3
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 28 5.3
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 27 7.0
Z82286-5|CAB05311.1| 130|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z73978-1|CAA98294.1| 236|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z29117-7|CAA82379.1| 159|Caenorhabditis elegans Hypothetical pr... 27 9.3
U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical pr... 27 9.3
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 27 9.3
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 27 9.3
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 208 bits (508), Expect = 2e-54
Identities = 105/148 (70%), Positives = 118/148 (79%), Gaps = 1/148 (0%)
Frame = +1
Query: 79 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 258
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 259 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDAXVRGTAQQPK 435
LVVA+++ G + A Y L KGF HL AGL GL AG+AI IVGDA VRGTAQQP+
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 436 LFVGMILILIFAEVLGLYGLIVAIYLYT 519
LFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 37.1 bits (82), Expect = 0.009
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = +1
Query: 295 EPANYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDAXVRGTAQQPKLFVGMILILIFAE 474
E A Y + G++ + G A G A S VG + +P+L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 475 VLGLYGLIVAIYLYTK*T 528
++G+YGL+VA+ L K T
Sbjct: 67 IIGIYGLVVAMVLKGKVT 84
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 208 bits (508), Expect = 2e-54
Identities = 105/148 (70%), Positives = 118/148 (79%), Gaps = 1/148 (0%)
Frame = +1
Query: 79 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 258
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 259 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDAXVRGTAQQPK 435
LVVA+++ G + A Y L KGF HL AGL GL AG+AI IVGDA VRGTAQQP+
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 436 LFVGMILILIFAEVLGLYGLIVAIYLYT 519
LFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 37.1 bits (82), Expect = 0.009
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = +1
Query: 295 EPANYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDAXVRGTAQQPKLFVGMILILIFAE 474
E A Y + G++ + G A G A S VG + +P+L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 475 VLGLYGLIVAIYLYTK*T 528
++G+YGL+VA+ L K T
Sbjct: 67 IIGIYGLVVAMVLKGKVT 84
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 208 bits (508), Expect = 2e-54
Identities = 105/148 (70%), Positives = 118/148 (79%), Gaps = 1/148 (0%)
Frame = +1
Query: 79 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 258
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 259 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDAXVRGTAQQPK 435
LVVA+++ G + A Y L KGF HL AGL GL AG+AI IVGDA VRGTAQQP+
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 436 LFVGMILILIFAEVLGLYGLIVAIYLYT 519
LFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 37.1 bits (82), Expect = 0.009
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = +1
Query: 295 EPANYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDAXVRGTAQQPKLFVGMILILIFAE 474
E A Y + G++ + G A G A S VG + +P+L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 475 VLGLYGLIVAIYLYTK*T 528
++G+YGL+VA+ L K T
Sbjct: 67 IIGIYGLVVAMVLKGKVT 84
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 208 bits (508), Expect = 2e-54
Identities = 105/148 (70%), Positives = 118/148 (79%), Gaps = 1/148 (0%)
Frame = +1
Query: 79 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 258
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 259 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDAXVRGTAQQPK 435
LVVA+++ G + A Y L KGF HL AGL GL AG+AI IVGDA VRGTAQQP+
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 436 LFVGMILILIFAEVLGLYGLIVAIYLYT 519
LFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 37.1 bits (82), Expect = 0.009
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = +1
Query: 295 EPANYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDAXVRGTAQQPKLFVGMILILIFAE 474
E A Y + G++ + G A G A S VG + +P+L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 475 VLGLYGLIVAIYLYTK*T 528
++G+YGL+VA+ L K T
Sbjct: 67 IIGIYGLVVAMVLKGKVT 84
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 192 bits (468), Expect = 1e-49
Identities = 92/147 (62%), Positives = 116/147 (78%), Gaps = 1/147 (0%)
Frame = +1
Query: 76 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 255
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 256 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDAXVRGTAQQP 432
GLVVAV+++G ++ ANY + F GL GL AG+AI I GDA VR +QQP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 433 KLFVGMILILIFAEVLGLYGLIVAIYL 513
++FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 140 RMFVGMILILIFAEVLGLYGMIVALIL 166
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 192 bits (468), Expect = 1e-49
Identities = 92/147 (62%), Positives = 116/147 (78%), Gaps = 1/147 (0%)
Frame = +1
Query: 76 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 255
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 256 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVRFSGLAAGFAISIVGDAXVRGTAQQP 432
GLVVAV+++G ++ ANY + F GL GL AG+AI I GDA VR +QQP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 433 KLFVGMILILIFAEVLGLYGLIVAIYL 513
++FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 140 RMFVGMILILIFAEVLGLYGMIVALIL 166
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 80.2 bits (189), Expect = 9e-16
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Frame = +1
Query: 100 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 279
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 280 AGALQE--PANYP------------LYKGFIHLGAGLAVRFSGLAAGFAISIVGDAXVRG 417
G L E + P L G++ G GL V S L G A+ IVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 418 TAQQPKLFVGMILILIFAEVLGLYGLIVAI 507
A P LFV +++I IFA +GL+G+I+ I
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGMIIGI 203
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +1
Query: 334 LGAGLAVRFSGLAAGFAISIVGDAXVRGTAQQPKLFVGMILILIFAEVLGLYGLIVAIYL 513
LG G ++ S L AG+ I G + + G + P++ ++ +IF E + ++G+I+A
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 514 YTK 522
K
Sbjct: 114 VGK 116
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 80.2 bits (189), Expect = 9e-16
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Frame = +1
Query: 100 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 279
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 280 AGALQE--PANYP------------LYKGFIHLGAGLAVRFSGLAAGFAISIVGDAXVRG 417
G L E + P L G++ G GL V S L G A+ IVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 418 TAQQPKLFVGMILILIFAEVLGLYGLIVAI 507
A P LFV +++I IFA +GL+G+I+ I
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGMIIGI 203
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +1
Query: 334 LGAGLAVRFSGLAAGFAISIVGDAXVRGTAQQPKLFVGMILILIFAEVLGLYGLIVAIYL 513
LG G ++ S L AG+ I G + + G + P++ ++ +IF E + ++G+I+A
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 514 YTK 522
K
Sbjct: 114 VGK 116
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 33.5 bits (73), Expect = 0.11
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 213 VDHSCRHGGYYCHLRSGRGCPDCWCPPG 296
V H C +GG+ + S R P C CP G
Sbjct: 1800 VGHECLNGGFCSYANSNRSLPHCICPSG 1827
>AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical
protein T22E7.1b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 312 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 214
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical
protein T22E7.1a protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 312 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 214
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = -1
Query: 549 EVVCVPGRLFCVQVDGDDKSVKTQYFSENKNKNHSD---E*LRLLSSTTHACISHDAYGE 379
E+ + ++ ++DG++ K + K KNH+D E LL ST+ + ++ D
Sbjct: 499 ELAAMSWKIRWEELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKRSS 558
Query: 378 TGSQTRE 358
+ TR+
Sbjct: 559 SSGTTRK 565
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -1
Query: 549 EVVCVPGRLFCVQVDGDDKSVKTQYFSENKNKNHSD---E*LRLLSSTTHACISHDAYGE 379
E+ + ++ ++DG++ K + K KNH+D E LL ST+ + ++ D + E
Sbjct: 545 ELAAMSWKIRWEELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -1
Query: 549 EVVCVPGRLFCVQVDGDDKSVKTQYFSENKNKNHSD---E*LRLLSSTTHACISHDAYGE 379
E+ + ++ ++DG++ K + K KNH+D E LL ST+ + ++ D + E
Sbjct: 545 ELAAMSWKIRWEELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 243 YCHLRSGRGCPDCWCPPGASQ 305
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 225 CRHGGYYCHLRSGRGCPDCWCPPGASQ 305
C HG Y ++ SG GC +C C P S+
Sbjct: 915 CAHGFY--NITSGLGCQECNCDPLGSE 939
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 243 YCHLRSGRGCPDCWCPPGASQ 305
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 243 YCHLRSGRGCPDCWCPPGASQ 305
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical
protein R07B7.10 protein.
Length = 285
Score = 28.3 bits (60), Expect = 4.0
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = +1
Query: 250 IYGLVVAVLIAGALQEPANYPLYKG----FIHLGAGLAVRFSGLAAGFAISIVGDAXVRG 417
IY +V ++ QE Y LYKG FI GA ++ F+G AG GD+ V
Sbjct: 34 IYKGIVDCMVKTMKQESV-YGLYKGMFVPFISTGALHSLLFAGYGAGLKFLNPGDSNVMA 92
Query: 418 TAQQPKLFVGMILILIFAEVLGLYGLIVAIYL 513
P + ILI L G ++ + L
Sbjct: 93 RKDLP---MSDILIASICGTLVQVGPVIPVEL 121
>U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical
protein C32E8.5 protein.
Length = 299
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 372 SQTRESYSQTSTQVDE-PFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLR 196
S++R+ ++ T+ D+ P +K V E S+ DS + D R DDR D D R
Sbjct: 24 SRSRDRQTRRDTRRDDSPKIKREVKE--EQFSDNDSPRRRRDDRGGRRDDRRDNRRDDRR 81
Query: 195 PH 190
H
Sbjct: 82 DH 83
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 193 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLY 318
RPE ++ +VMA + AIY + +++ L NY LY
Sbjct: 35 RPEYGSYKLLMMVMATLYAIYSAIEVIILPSYLVFEYNYLLY 76
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +1
Query: 205 IMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVR 357
+++ ++P + I+ + L + L+ GA+ N+ L + IH+GA L +R
Sbjct: 501 MIRMMLPYLPHHILTVQDLNLNTLLHGAINSE-NFELVEFLIHMGAPLQIR 550
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +3
Query: 246 CHLRSGR-GCPDCWCPPGASQLPP 314
C L + R GCP C CPP PP
Sbjct: 933 CQLVNDRSGCPFCSCPPVKQASPP 956
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 225 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 350
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 225 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 350
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -1
Query: 420 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 244
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 570 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 629
Query: 243 N 241
N
Sbjct: 630 N 630
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -1
Query: 420 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 244
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 570 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 629
Query: 243 N 241
N
Sbjct: 630 N 630
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -1
Query: 420 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 244
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 609 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 668
Query: 243 N 241
N
Sbjct: 669 N 669
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Frame = +2
Query: 20 FGTCKYSHI*QTKWLKIIQS-------TDPSLELWGRRLLSSSAPWELPMELPSQE 166
F TC + + T + +QS ++ W R +L +PW L M++P +E
Sbjct: 293 FHTCNFISVLATSFTVYVQSFHFRNQHVHERMDFWMRFILLEWSPWLLRMKMPDRE 348
>Z82286-5|CAB05311.1| 130|Caenorhabditis elegans Hypothetical
protein W02A2.8 protein.
Length = 130
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Frame = +3
Query: 204 DHEVDHSCRHGGY-YCHLR-----SGRGCPDCWCPPGA 299
DH+VD + YCHLR + R CPD W GA
Sbjct: 42 DHDVDRTIYDIPLEYCHLRIPKSRTSRSCPDPWRRYGA 79
>Z73978-1|CAA98294.1| 236|Caenorhabditis elegans Hypothetical
protein ZC302.3 protein.
Length = 236
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -1
Query: 492 SVKTQYFSENKNKNHSDE*LRLLSSTTHACISHDAYG--ETGSQTRESYSQTSTQVDEPF 319
S++T+Y + N+N S +L+ A + +AY + R+ + + ++D F
Sbjct: 154 SLQTEYLNYKANRNDSRSPSQLVKKIKDATMKAEAYEFFMDDKRVRKVIGELN-EIDSKF 212
Query: 318 VKGVVGWLLE 289
+ + WLL+
Sbjct: 213 KENIGAWLLQ 222
>Z29117-7|CAA82379.1| 159|Caenorhabditis elegans Hypothetical
protein C48B4.7 protein.
Length = 159
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
Frame = +1
Query: 424 QQPKLFVGMILILI-----FAEVLGLYGLIVAIYLY 516
Q+ +FV M+L+L+ F LG YG ++AI+ Y
Sbjct: 48 QEEIVFVAMVLLLVFTISSFVAFLGEYGTMMAIHYY 83
>U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical
protein F19F10.9 protein.
Length = 829
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -1
Query: 333 VDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHR 184
+ P K G L+ N+ + Q +DG DDRN + D+L HR
Sbjct: 676 LQNPNAKSHSGPSLDHLKNKTT--QRIDGQRFDPDDRNAKKADRLNSQHR 723
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -2
Query: 485 RPNTSAKIRIRIIPTNNLGC*AVPRTXASPTMLMAKPAARPENLTAKP 342
RP T A R+R P L PR T A P +RP +T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -2
Query: 485 RPNTSAKIRIRIIPTNNLGC*AVPRTXASPTMLMAKPAARPENLTAKP 342
RP T A R+R P L PR T A P +RP +T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,414,737
Number of Sequences: 27780
Number of extensions: 321441
Number of successful extensions: 986
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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