Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30071
         (669 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0017 + 18937774-18937864,18938505-18940945                      216   2e-56
04_01_0103 + 1082077-1082167,1083037-1085477                          213   8e-56
01_06_0662 + 30987187-30987277,30987825-30990214                      192   3e-49
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912    187   6e-48
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240...   154   5e-38
03_05_0511 + 25056018-25059107                                        100   2e-21
02_04_0148 - 20198407-20201424                                         95   5e-20
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936...    52   3e-07
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051...    48   5e-06
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400...    38   0.010
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300...    37   0.017
01_04_0109 + 16112581-16112934                                         32   0.36 
04_01_0330 - 4369326-4370852                                           30   1.9  
09_06_0142 - 21107878-21109104                                         28   5.9  

>02_04_0017 + 18937774-18937864,18938505-18940945
          Length = 843

 Score =  216 bits (527), Expect = 2e-56
 Identities = 97/145 (66%), Positives = 116/145 (80%)
 Frame = +3

Query: 3    FNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYG 182
            F + DV LH DAIHRGGGQ+IPT RR +YA  LTA+PRL+EPVYL EIQ PE A+GGIYG
Sbjct: 687  FEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYG 746

Query: 183  VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 362
            VLN++RGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++ 
Sbjct: 747  VLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMT 806

Query: 363  GDPCEPQSKPYNVVQETRKRKGLKE 437
             DP E  S+   +VQ+ RKRKGLKE
Sbjct: 807  SDPLEAGSQASTLVQDIRKRKGLKE 831


>04_01_0103 + 1082077-1082167,1083037-1085477
          Length = 843

 Score =  213 bits (521), Expect = 8e-56
 Identities = 96/145 (66%), Positives = 115/145 (79%)
 Frame = +3

Query: 3    FNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYG 182
            F + DV LH DAIHRGGGQ+IPT RR +YA  LTA+PRL+EPVYL EIQ PE A+GGIYG
Sbjct: 687  FEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYG 746

Query: 183  VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 362
            VLN++RGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++ 
Sbjct: 747  VLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMT 806

Query: 363  GDPCEPQSKPYNVVQETRKRKGLKE 437
             DP E  S+   +V + RKRKGLKE
Sbjct: 807  SDPLEVSSQANQLVLDIRKRKGLKE 831


>01_06_0662 + 30987187-30987277,30987825-30990214
          Length = 826

 Score =  192 bits (467), Expect = 3e-49
 Identities = 87/129 (67%), Positives = 104/129 (80%)
 Frame = +3

Query: 3    FNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYG 182
            F + DV LH+DAIHRGGGQIIPT RR +YA  LTA+PRL+EPVYL EIQ PE A+GGIY 
Sbjct: 685  FEVCDVILHSDAIHRGGGQIIPTARRVIYAAQLTAKPRLLEPVYLVEIQAPENALGGIYS 744

Query: 183  VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 362
            VLN++RGHVFEE Q  GTP++ +KAYLPV ESFGFT+ LR+ T GQAFP  VFDHW++L 
Sbjct: 745  VLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFTSTLRAATSGQAFPLFVFDHWEMLS 804

Query: 363  GDPCEPQSK 389
             DP EP ++
Sbjct: 805  VDPLEPGTR 813


>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
          Length = 853

 Score =  187 bits (456), Expect = 6e-48
 Identities = 83/145 (57%), Positives = 106/145 (73%)
 Frame = +3

Query: 3    FNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYG 182
            F + DVTLH+D+IHRGGGQ+IPT RR +YA  LTA PRLMEP+Y  +IQ P+ AVG +YG
Sbjct: 697  FELCDVTLHSDSIHRGGGQLIPTARRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYG 756

Query: 183  VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 362
            VLN R G + EES+  GTP+  ++ YLPV +SF FT  LR+ T GQAFPQC+F HWQ + 
Sbjct: 757  VLNSRNGELVEESERTGTPLSNLRFYLPVAKSFDFTEKLRAETSGQAFPQCIFHHWQTMR 816

Query: 363  GDPCEPQSKPYNVVQETRKRKGLKE 437
             DP +  S+   V+ + RKRKGLK+
Sbjct: 817  SDPFQEGSEAAKVITDIRKRKGLKD 841


>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
            23824124-23824322,23824410-23824495,23824940-23825098,
            23825204-23825302,23825385-23826578,23826666-23826734,
            23828042-23828812
          Length = 997

 Score =  154 bits (374), Expect = 5e-38
 Identities = 80/157 (50%), Positives = 99/157 (63%), Gaps = 12/157 (7%)
 Frame = +3

Query: 3    FNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYG 182
            F I +  +  + +HRGGGQIIPT RR +Y+  L A PRLMEPVY  EIQ P   V  IY 
Sbjct: 813  FKILNANIAPEPLHRGGGQIIPTARRVVYSAFLMANPRLMEPVYYIEIQTPIDCVSAIYT 872

Query: 183  VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 362
            VL+RRRGHV  +    GTP+++VKA+LPV ESFGF  DLR +T GQAF   VFDHW ++P
Sbjct: 873  VLSRRRGHVTADVPKPGTPIYVVKAFLPVIESFGFETDLRYHTQGQAFCLSVFDHWAIVP 932

Query: 363  GD---------PCEP---QSKPYNVVQETRKRKGLKE 437
            GD         P EP   Q      + +TR+RKG+ E
Sbjct: 933  GDPLDKNIVLRPLEPAPIQHLAREFMVKTRRRKGMSE 969


>03_05_0511 + 25056018-25059107
          Length = 1029

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 46/119 (38%), Positives = 66/119 (55%)
 Frame = +3

Query: 15   DVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNR 194
            D   H++  +   GQ+I   +      ++  +PRL+E +Y CE+  P   +G  Y VL+R
Sbjct: 854  DAANHSEQYNIFSGQVITAVKEACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSR 913

Query: 195  RRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 371
            +R  V +E    GT +F V AYLPV ES GF+ +LRS T G A    V  HW+ +P DP
Sbjct: 914  KRARVLKEEMQEGTSLFTVHAYLPVAESVGFSNELRSVTAGAASALLVLSHWEAIPEDP 972


>02_04_0148 - 20198407-20201424
          Length = 1005

 Score = 95.1 bits (226), Expect = 5e-20
 Identities = 45/106 (42%), Positives = 59/106 (55%)
 Frame = +3

Query: 54   GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAG 233
            GQII   R    A +L ++PRL+EP+Y CE+  P   +G +Y VL   R  V +E    G
Sbjct: 843  GQIITAVREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKEEMQEG 902

Query: 234  TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 371
            T +F V AYL V ES  F+  LR+ T G A     F HW+ +P DP
Sbjct: 903  TSLFTVHAYLSVAESSEFSKKLRNATAGAASALLAFSHWETVPQDP 948


>04_04_0640 -
           26891552-26891725,26891814-26892326,26892698-26893644,
           26893778-26894114,26894413-26894462,26895020-26895248
          Length = 749

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 31/89 (34%), Positives = 46/89 (51%)
 Frame = +3

Query: 96  LLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNE 275
           L  A PRL+EP+   E+  PE  +G + G LN RRG V       G  + +V A++P+ E
Sbjct: 644 LRKAGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG-GLKVVDAFVPLAE 702

Query: 276 SFGFTADLRSNTGGQAFPQCVFDHWQVLP 362
            F + + LR  T G+A        + V+P
Sbjct: 703 MFQYVSTLRGMTKGRASYTMQLAKFDVVP 731


>03_05_0044 +
           20203644-20204054,20204695-20204916,20205092-20205130,
           20206275-20206396,20206489-20206639,20207892-20207963,
           20208256-20208351,20208861-20208949,20209068-20209134,
           20210197-20210235,20210369-20210429,20210572-20210681,
           20210766-20210840,20210914-20210982,20213126-20213247,
           20214682-20214807,20214897-20215017,20215133-20215233,
           20215564-20215624,20216560-20216613,20217585-20217689
          Length = 770

 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 24/76 (31%), Positives = 41/76 (53%)
 Frame = +3

Query: 93  CLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVN 272
           C   A+P ++EPV   E++ P    G + G +N+R+G +    Q       +V  ++P+N
Sbjct: 665 CYAAARPVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLN 722

Query: 273 ESFGFTADLRSNTGGQ 320
             FG++  LRS T G+
Sbjct: 723 NMFGYSTALRSMTQGK 738


>02_02_0474 +
           10738476-10738797,10739568-10739677,10739891-10740094,
           10740400-10740576,10740659-10740811,10741535-10741624,
           10741939-10742049,10742169-10742285,10742881-10743032,
           10743116-10743200,10743597-10743691,10744211-10744376,
           10744459-10744654,10745662-10745795
          Length = 703

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 20/89 (22%), Positives = 38/89 (42%)
 Frame = +3

Query: 102 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 281
           T   +L EP  +  ++ PE  +G +  +L +RRG + +          ++K  +P     
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSGPEGTTLLKYKIPTRGLI 556

Query: 282 GFTADLRSNTGGQAFPQCVFDHWQVLPGD 368
           G    + + + G A    +FD +    GD
Sbjct: 557 GLRNAVLTASRGTAILNTIFDSYGPWAGD 585


>11_06_0768 +
           27129007-27129038,27129140-27129220,27129723-27130089,
           27130165-27130255,27130515-27130595,27130764-27131830,
           27132060-27132071,27132465-27133209,27133210-27135244,
           27135712-27135787,27135925-27136029,27137080-27137166
          Length = 1592

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +1

Query: 274 SRSVLLPICVPTPADRPSRSAYSTIGRSSLETRANLRASPTTLYRKRERGKD 429
           S S  +P  +P P D PS+   +T G  S+   +N   SP+ +Y K   G D
Sbjct: 19  STSARVPGVIPKPIDLPSQRGTATQGDKSMPPASNAWGSPSVMYPKNGGGSD 70


>01_04_0109 + 16112581-16112934
          Length = 117

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +1

Query: 271 MSRSVLLP--ICVPTPADRPSRSAYSTIGRSSLETRANLRASPTTLYRKRERGK 426
           M+  VL P  + +P+PA R  R+  +T  R++   +++ R  PTT   +R +G+
Sbjct: 1   MATEVLRPHNVLLPSPAQRRIRATAATHQRTANNHQSDARTKPTTAGSRRRQGR 54


>04_01_0330 - 4369326-4370852
          Length = 508

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 70  VGMIWPPPLWMASVWSVTS 14
           +G IWPPP+W     S TS
Sbjct: 487 IGKIWPPPVWFKRCTSATS 505


>09_06_0142 - 21107878-21109104
          Length = 408

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 395 VGLALRFARVSREDLPMVEYALREGLS-AGVGTQIGSKTER 276
           V L L++     E LP++  A REG++ AGV   +GS   R
Sbjct: 171 VDLGLKYGANPDEVLPLLRAAQREGVAVAGVSFHVGSGASR 211


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,865,119
Number of Sequences: 37544
Number of extensions: 415335
Number of successful extensions: 1089
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)