Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30071
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 277 4e-75
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 277 4e-75
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 148 4e-36
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 148 4e-36
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 35 0.045
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 30 1.3
AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical ... 30 1.7
AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 29 3.9
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 28 5.2
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 277 bits (680), Expect = 4e-75
Identities = 124/148 (83%), Positives = 134/148 (90%)
Frame = +3
Query: 3 FNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYG 182
FN++DVTLH DAIHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYG
Sbjct: 696 FNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYG 755
Query: 183 VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 362
VLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP
Sbjct: 756 VLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 815
Query: 363 GDPCEPQSKPYNVVQETRKRKGLKEGLP 446
GDP E +KP +V +TRKRKGLKEG+P
Sbjct: 816 GDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 277 bits (680), Expect = 4e-75
Identities = 124/148 (83%), Positives = 134/148 (90%)
Frame = +3
Query: 3 FNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYG 182
FN++DVTLH DAIHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYG
Sbjct: 696 FNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYG 755
Query: 183 VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 362
VLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP
Sbjct: 756 VLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 815
Query: 363 GDPCEPQSKPYNVVQETRKRKGLKEGLP 446
GDP E +KP +V +TRKRKGLKEG+P
Sbjct: 816 GDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 148 bits (358), Expect = 4e-36
Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 12/157 (7%)
Frame = +3
Query: 3 FNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYG 182
F + D + T+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P V +Y
Sbjct: 793 FKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYT 852
Query: 183 VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 362
VL +RRGHV ++ + G+PM+ + AY+PV +SFGF DLR +T GQAF F HWQ++P
Sbjct: 853 VLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGFETDLRIHTQGQAFCMSAFHHWQLVP 912
Query: 363 GDPCEP---------QSKPY---NVVQETRKRKGLKE 437
GDP + Q P+ + +TR+RKGL E
Sbjct: 913 GDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRKGLSE 949
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 148 bits (358), Expect = 4e-36
Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 12/157 (7%)
Frame = +3
Query: 3 FNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYG 182
F + D + T+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P V +Y
Sbjct: 668 FKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYT 727
Query: 183 VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 362
VL +RRGHV ++ + G+PM+ + AY+PV +SFGF DLR +T GQAF F HWQ++P
Sbjct: 728 VLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGFETDLRIHTQGQAFCMSAFHHWQLVP 787
Query: 363 GDPCEP---------QSKPY---NVVQETRKRKGLKE 437
GDP + Q P+ + +TR+RKGL E
Sbjct: 788 GDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRKGLSE 824
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical protein
K10C3.5a protein.
Length = 894
Score = 70.5 bits (165), Expect = 1e-12
Identities = 37/107 (34%), Positives = 53/107 (49%)
Frame = +3
Query: 51 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 230
GGQ++ + A RL+ +Y C + A+G ++ VL++R+ V E
Sbjct: 732 GGQMMTAIKASCSAAAKKLALRLVAAMYRCTVTTASQALGKVHAVLSQRKSKVLSEDINE 791
Query: 231 GTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 371
T +F V + +PV ESF F LR T G A Q F HWQV+ DP
Sbjct: 792 ATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 838
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/55 (43%), Positives = 28/55 (50%)
Frame = +3
Query: 207 VFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 371
V E T +F V + +PV ESF F LR T G A Q F HWQV+ DP
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 649
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 35.1 bits (77), Expect = 0.045
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 117 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTAD 296
L+EP+ E P G + L +R + G I +A P+++ FG+T++
Sbjct: 642 LLEPIMKVEATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSE 699
Query: 297 LRSNTGGQ 320
LRS T G+
Sbjct: 700 LRSLTEGK 707
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +3
Query: 51 GGQIIPT-----TRRCLYACLLTAQPRLMEPVYLCEIQCP-EVAVGGIYGVLNRRRGHVF 212
GG+I P ++C+ L + + L EPV +I+ + I L RRR H
Sbjct: 565 GGKINPALLSACAQKCVSEALSSGEMVLTEPVMEVQIEIRNDDPTQPILNELLRRRAHFE 624
Query: 213 EESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 317
T + + A LP++E+ + +R+ T G
Sbjct: 625 HSDATESTEIRRICAILPLSETENLSKTVRTLTSG 659
>AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical
protein T24A6.11 protein.
Length = 359
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 595 LLSHLRVCFNMMRNMCC*K*TCVKRFPYRYVFLICFNYVV 476
+L+ LR+C+ C + TC K FP ++V L+ ++VV
Sbjct: 290 ILTPLRICYTSCLFQHC-QITCQKNFPTKFVDLLSLSHVV 328
>AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical
protein F02E11.1 protein.
Length = 567
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 362 REDLPMVEYALREGLSAGVGTQIGSKTERLID 267
+ED+ +EY + E ++ +GTQ+ KT +D
Sbjct: 232 QEDVTRIEYLIHEYQNSDIGTQMLKKTRTAVD 263
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
F22E10.2 protein.
Length = 1324
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 51 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRR 197
G Q + T RCL A +L + +M + + + A G ++ ++NR+
Sbjct: 1017 GDQTVDKTFRCLMAMMLCCEGIIMSAQFFPQFVGAKSAAGQMFNLINRQ 1065
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,000,107
Number of Sequences: 27780
Number of extensions: 350088
Number of successful extensions: 836
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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