Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30069
         (658 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g17830.1 68417.m02659 peptidase M20/M25/M40 family protein si...    37   0.014
At1g44820.1 68414.m05134 aminoacylase, putative / N-acyl-L-amino...    35   0.055
At1g44180.1 68414.m05103 aminoacylase, putative / N-acyl-L-amino...    33   0.17 
At1g62570.1 68414.m07059 flavin-containing monooxygenase family ...    30   1.6  
At4g11030.1 68417.m01794 long-chain-fatty-acid--CoA ligase, puta...    27   8.3  
At3g11490.1 68416.m01401 rac GTPase activating protein, putative...    27   8.3  
At2g17530.1 68415.m02028 protein kinase family protein identical...    27   8.3  

>At4g17830.1 68417.m02659 peptidase M20/M25/M40 family protein
           similar to acetylornithine deacetylase
           (Acetylornithinase, AO; N-acetylornithinase, NAO)
           [Dictyostelium discoideum] SWISS-PROT:P54638
          Length = 440

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 19/39 (48%), Positives = 23/39 (58%)
 Frame = +3

Query: 360 HLDVQPALKSDGWETEPFELVERNEKLYGRGSTDDKGPV 476
           H+DV  A   D WE +PF L    +KL GRG+TD  G V
Sbjct: 101 HMDVVTA-NPDDWEFDPFSLSIDGDKLRGRGTTDCLGHV 138


>At1g44820.1 68414.m05134 aminoacylase, putative /
           N-acyl-L-amino-acid amidohydrolase, putative similar to
           aminoacylase-1 (N-acyl-L-amino-acid amidohydrolase
           ACY-1)[Homo sapiens] SWISS-PROT:Q03154
          Length = 438

 Score = 34.7 bits (76), Expect = 0.055
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = +3

Query: 324 NDPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNE-KLYGRGSTDDKGPVLGWLHTIN 500
           ++P   ++    HLD  PA +S+ W   PF   +  +  +Y RG+ DDK   + +L +I 
Sbjct: 85  SNPNLPSILFNSHLDSVPA-ESEKWTYPPFSAHKTIDGHIYARGAQDDKCIGVQYLESIR 143

Query: 501 AYKALVLSCLSILKFIFECMEESG 572
             K+   S L  +   +   EE G
Sbjct: 144 NLKSRGFSPLRTIHISYVPEEEIG 167


>At1g44180.1 68414.m05103 aminoacylase, putative /
           N-acyl-L-amino-acid amidohydrolase, putative similar to
           aminoacylase-1 (N-acyl-L-amino-acid amidohydrolase,
           ACY-1) [Homo sapiens] SWISS-PROT:Q03154
          Length = 435

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +3

Query: 339 NTVCIYGHLDVQPALKSDGWETEPFELVERNE-KLYGRGSTDDKGPVLGWLHTINAYKAL 515
           +++    HLD  PA +S+ W   PF      +  +Y RG+ DDK   + +L  I   K+ 
Sbjct: 92  SSILFNSHLDSVPA-ESEKWIHPPFSAHRTIDGHIYARGAQDDKCIGVQYLEAIRNLKSR 150

Query: 516 VLSCLSILKFIFECMEESGSEG 581
             S L  +   +   EE G  G
Sbjct: 151 SFSPLRTIHISYVPEEEIGGFG 172


>At1g62570.1 68414.m07059 flavin-containing monooxygenase family
           protein / FMO family protein low similarity to
           flavin-containing monooxygenase FMO3 [Rattus norvegicus]
           GI:12006730; contains Pfam profile PF00743:
           Flavin-binding monooxygenase-like
          Length = 461

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 19/64 (29%), Positives = 33/64 (51%)
 Frame = +3

Query: 27  YSVSSKQVSAKMATEKTLPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVH 206
           + V SK V+A ++   TLP + + +D  K SY+   +EA+ IP        ++ C   + 
Sbjct: 337 FEVQSKWVAAVLSGRVTLPSVDEMMDDLKLSYE--TQEALGIPKRYTHKLGKSQC-EYLD 393

Query: 207 WMQD 218
           W+ D
Sbjct: 394 WIAD 397


>At4g11030.1 68417.m01794 long-chain-fatty-acid--CoA ligase,
           putative / long-chain acyl-CoA synthetase, putative
           similar to acyl-CoA synthetase (MF7P) gi:1617270 from
           Brassica napus
          Length = 666

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 19/70 (27%), Positives = 33/70 (47%)
 Frame = +3

Query: 27  YSVSSKQVSAKMATEKTLPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVH 206
           + +S  +VS     EK +PE+FK    N   Y   +K  V+   V  + K  A+ + +V 
Sbjct: 145 FIISHAEVSIAFVEEKKIPELFK-TCPNSTKY---MKTVVSFGGVKPEQKEEAEKLGLVI 200

Query: 207 WMQDKLKEVG 236
              D+  ++G
Sbjct: 201 HSWDEFLKLG 210


>At3g11490.1 68416.m01401 rac GTPase activating protein, putative
           similar to rac GTPase activating protein 1 GB:AAC62624
           GI:3695059 [Lotus japonicus]; contains Pfam profile
           PF00620: RhoGAP domain
          Length = 435

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 524 LPVNFEVH-FRMYGGIWFRRLDSLLMDKLKPEGFFDS 631
           +P N +VH        WFR L S ++D L PE   +S
Sbjct: 198 IPDNIDVHCLASLIKAWFRELPSGVLDSLSPEQVMES 234


>At2g17530.1 68415.m02028 protein kinase family protein identical to
           SRPK2 [Arabidopsis thaliana] gi|9843645|emb|CAC03676;
           contains protein kinase domain, Pfam:PF00069
          Length = 440

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 254 GCWLSNNRWQRRSTAASFSRRIG**SKKKYSLYLWSFGCT 373
           GCW  N   +   T    +  +   S   YS+ +WSF CT
Sbjct: 263 GCWADNKFAEEIQTRQYRAPEVILQSGYSYSVDMWSFACT 302


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,979,885
Number of Sequences: 28952
Number of extensions: 316599
Number of successful extensions: 770
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)