Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30068
         (639 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.82 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.82 
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    24   1.4  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   7.6  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 164 GNYILHYIGETPGLYGVGFMVRKNLADNIEELRGISERIAILNIK 298
           G  ILHY  + PGL  +   + K +A   ++L G    + IL  K
Sbjct: 129 GALILHYYSDRPGLEHIVIGIVKTVA---KKLHGTDIEMRILKTK 170


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 164 GNYILHYIGETPGLYGVGFMVRKNLADNIEELRGISERIAILNIK 298
           G  ILHY  + PGL  +   + K +A   ++L G    + IL  K
Sbjct: 129 GALILHYYSDRPGLEHIVIGIVKTVA---KKLHGTDIEMRILKTK 170


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/57 (24%), Positives = 25/57 (43%)
 Frame = +2

Query: 383 KIENFYNDLQSTMESAHKNKIVMGDFNGQIGTQKNGEEYIIGRYGFGFRSKNGTRIS 553
           K  +  ND+++ +     NK     F G  G + + ++    R   GF+   G +IS
Sbjct: 68  KKNSIINDVKNELFPEDINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMRGKKIS 124


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 470 IGTQKNGEEYIIGRY 514
           I  Q+NG++  +GRY
Sbjct: 363 INIQENGDQVSVGRY 377


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,909
Number of Sequences: 438
Number of extensions: 3610
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)