Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30066
(585 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 174 5e-44
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 167 7e-42
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 156 1e-38
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 58 7e-09
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 56 3e-08
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 54 1e-07
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 53 1e-07
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 53 1e-07
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 52 3e-07
02_01_0095 - 679597-679671,679775-679890,682241-682319,682446-68... 33 0.13
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170... 32 0.29
11_04_0381 - 16999529-16999778,16999855-17000102 31 0.51
08_02_1545 - 27790328-27790358,27790512-27791110,27791428-277916... 29 2.1
10_08_0374 - 17312430-17312513,17312794-17313029,17313081-173132... 29 2.7
04_03_1035 - 21887562-21890030 29 2.7
08_02_0459 + 17420156-17420976,17422291-17424199 29 3.6
04_01_0363 + 4754650-4755912 29 3.6
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 28 4.8
06_03_0449 + 20907491-20910146,20910313-20910782 28 4.8
04_04_1638 + 34974369-34974764 28 4.8
06_03_0885 + 25677243-25678157,25681064-25681705 28 6.3
06_01_0587 - 4211917-4212021,4212250-4212478,4213426-4213759,421... 28 6.3
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 28 6.3
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 27 8.3
11_04_0153 + 14159820-14162417 27 8.3
09_04_0189 + 15438538-15438591,15438671-15438891,15438982-154392... 27 8.3
02_05_0003 - 24867053-24867145,24867264-24867437,24867673-248677... 27 8.3
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 174 bits (423), Expect = 5e-44
Identities = 78/152 (51%), Positives = 110/152 (72%)
Frame = +2
Query: 113 MPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDL 292
MPP + PRPY G S ++ + ++ S+ Y+KP+ + +G MQ+LYD +GKRYLD
Sbjct: 51 MPPFEHRPRPYAGWSGDEILAKRKQFLGSSVFYYYQKPLNIVEGKMQYLYDENGKRYLDC 110
Query: 293 FGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLV 472
FGGIVTVS GHCHP + A+ +Q +L HTT +Y + I E+ E LA+K+PG+L VVY V
Sbjct: 111 FGGIVTVSCGHCHPDIVNAVVEQTKLLQHTTTIYLNQPIVEFAEALASKMPGNLKVVYFV 170
Query: 473 NSGSEANELATLLAKAYTGNLDIISLQTSYHG 568
NSG+EANELA L+A+ Y+GNL++I+L+ +YHG
Sbjct: 171 NSGTEANELAMLMARLYSGNLNMIALRNAYHG 202
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 167 bits (405), Expect = 7e-42
Identities = 81/174 (46%), Positives = 111/174 (63%), Gaps = 2/174 (1%)
Frame = +2
Query: 53 MANRGTKLCFDIVRTYSTAKMPPTDF--VPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 226
+A RG V T + A DF VP PY GPS ++ + + ++ PS+ + Y KP
Sbjct: 5 IARRGLSRLAAAVETAAVAPPRMADFNHVPLPYDGPSAAEIARKRAEFLSPSLFHFYSKP 64
Query: 227 VLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPK 406
+ + +G MQ+L+D G+RYLD F GI TV GHCHP V A+ Q L H+T LY +
Sbjct: 65 LNIVEGKMQYLFDERGRRYLDAFAGIATVCCGHCHPDVVGAIAAQAGRLQHSTVLYLNHA 124
Query: 407 IYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHG 568
I ++ E LA+K+PGDL VV+ NSG+EANELA ++A+ YTG+ DIISL+ SYHG
Sbjct: 125 IADFAEALASKMPGDLKVVFFTNSGTEANELAIMMARLYTGSHDIISLRNSYHG 178
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 156 bits (379), Expect = 1e-38
Identities = 73/160 (45%), Positives = 104/160 (65%), Gaps = 7/160 (4%)
Frame = +2
Query: 110 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLT-------QGHMQWLYDN 268
KMPP D+ P PY GP +++ + + ++ PS+ + Y +P + + ++L+D
Sbjct: 44 KMPPFDYTPPPYDGPRAEEISRKRAEFLSPSLFHFYDRPWAYRHPRFGSYRDYHKYLFDE 103
Query: 269 DGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPG 448
DG+RYLD FGGI TV GHCHP V A+ +Q + H+T LY + I ++ E LAAK+PG
Sbjct: 104 DGRRYLDAFGGIATVCCGHCHPDVVEAMVNQAKRIQHSTVLYLNHAIADFAEALAAKMPG 163
Query: 449 DLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHG 568
DL VV+ NSG+EANELA ++A+ YTG DIISL+ YHG
Sbjct: 164 DLKVVFFTNSGTEANELALMIARLYTGCHDIISLRNGYHG 203
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 57.6 bits (133), Expect = 7e-09
Identities = 32/118 (27%), Positives = 59/118 (50%)
Frame = +2
Query: 170 EQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAA 349
E++ + S N + PV+ ++G + D +G +Y+D V+ GHCHPKV A
Sbjct: 40 EELMRMERERSAHNYHPIPVVFSKGEGSHILDPEGNKYIDFLSAYSAVNQGHCHPKVLRA 99
Query: 350 LKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 523
LK+Q + L ++ + + K + E L + ++ +N+G+E E A L + +
Sbjct: 100 LKEQAERLTLSSRAFYNDKFPIFAEYLTSMF--GYEMMLPMNTGAEGVETAIKLVRKW 155
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 55.6 bits (128), Expect = 3e-08
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +2
Query: 203 ITNAYKKP-VLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWH 379
I Y + V+L G LYD DG+ YLD+ GI ++GH P AA+ Q L H
Sbjct: 74 IVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATLVH 133
Query: 380 TTNL-YRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAY 523
+N+ Y P++ ++L D V+ N+G+EANE A A+ +
Sbjct: 134 ASNVQYTVPQV-ALAKRLVEASFADR--VFFANTGTEANEAAIKFARKF 179
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 53.6 bits (123), Expect = 1e-07
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Frame = +2
Query: 203 ITNAYKKP-VLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWH 379
I Y + V+L G LYD DG+ YLD+ GI ++GH P AA+ Q L H
Sbjct: 78 IVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATLVH 137
Query: 380 TTNL-YRHPKI-YEYVEQLAAKLPGDLNV---VYLVNSGSEANELATLLAKAY 523
+N+ Y P+ E V A + + V+ N+G+EANE A A+ Y
Sbjct: 138 ASNVQYTVPQASLERVTPTAHHRLVEASFADRVFFANTGTEANEAAIKFARKY 190
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = +2
Query: 221 KPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRH 400
+P++ ++D DG Y+D G +GH VNAAL ++ L T+ +
Sbjct: 85 QPIVFDSVKGSRMWDVDGNEYIDYVGSWGPAIIGHADDTVNAAL---IETLKKGTS-FGA 140
Query: 401 PKIYEYV--EQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTSYHG 568
P + E V E + + +P + +V VNSG+EA A L +A+TG I+ + YHG
Sbjct: 141 PCVLENVLAEMVISAVPS-IEMVRFVNSGTEACMGALRLVRAFTGREKILKFEGCYHG 197
>04_04_1143 +
31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Frame = +2
Query: 224 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL--WHT-TNLY 394
P+++ + ++YD DGK+YLD G+ ++G P++ A +QL L +H+ N
Sbjct: 511 PLVIERSEGSYVYDIDGKKYLDSLAGLWCTALGGSEPRLVKAATEQLHKLPFYHSFWNRT 570
Query: 395 RHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNL------DIISLQT 556
P + E L+ ++ V+ NSGSEAN+ L Y L I+
Sbjct: 571 TKPSLDLAKELLSMFTAREMGKVFFTNSGSEANDSQVKLVWYYNNALGRPDKKKFIARSK 630
Query: 557 SYHG 568
SYHG
Sbjct: 631 SYHG 634
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = +2
Query: 254 WLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL--WHT-TNLYRHPKIYEYVE 424
++YD+ G +YLD G+ ++G P++ A DQL+ L +H+ N P + E
Sbjct: 59 YVYDSKGNKYLDTLAGLWCTALGGSEPRLVKAATDQLNKLPFYHSFWNSTAKPPLDLAEE 118
Query: 425 QLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNL 535
++ ++ V+ NSGSEAN+ L Y L
Sbjct: 119 LISMFTAKEMGKVFFTNSGSEANDSQVKLVWYYNNAL 155
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 52.0 bits (119), Expect = 3e-07
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Frame = +2
Query: 224 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL--WHT-TNLY 394
P+++ + ++YD +GK+Y+D G+ + ++G P++ A DQL+ L +H+ N
Sbjct: 122 PLVIDRSEGSYVYDINGKKYIDALAGLWSTALGGNEPRLIKAATDQLNKLPFYHSFWNRT 181
Query: 395 RHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNL------DIISLQT 556
P + E L+ ++ ++ NSGSEAN+ L Y L I+
Sbjct: 182 TKPSLDLANEILSMFTAREMGKIFFTNSGSEANDSQVKLVWYYNNALGRPNKKKFIARSK 241
Query: 557 SYHG 568
SYHG
Sbjct: 242 SYHG 245
>02_01_0095 -
679597-679671,679775-679890,682241-682319,682446-682539,
682638-682716,682846-682933,683023-683106,683351-683398,
684044-684118,684274-684315,684347-684416,684551-684589,
685118-685191,686936-687028,687203-687300,688170-688236
Length = 406
Score = 33.5 bits (73), Expect = 0.13
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Frame = +2
Query: 317 VGHCHPKVNAALKDQLDVLWHTTNLYRH---PKIYEYVEQLAAKLPGDLNVVYLVNSGSE 487
VG P++ A +QL+ L + + H P + E ++ ++ V+ NSGSE
Sbjct: 22 VGGSEPRLVKAATEQLNKLPFYHSFWNHTTRPSLDLAKELISMFTAREMGKVFFTNSGSE 81
Query: 488 ANELATLLAKAYTGNL------DIISLQTSYHG 568
AN+ + Y L +IIS SYHG
Sbjct: 82 ANDSQVKIVWYYNNALGRPKKKNIISRTQSYHG 114
>12_02_0248 +
16413295-16414394,16416511-16416762,16416839-16417055,
16417216-16417353,16417493-16417669,16417744-16417851,
16417925-16418392,16418493-16418570,16418673-16418756
Length = 873
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +2
Query: 191 MPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 340
MPP T KPVL +G QW ND + + GI+TV + H P +
Sbjct: 432 MPPRPTRDEDKPVLTPKGDRQW-QANDFGGNIRVPTGILTVIIKHFFPGI 480
>11_04_0381 - 16999529-16999778,16999855-17000102
Length = 165
Score = 31.5 bits (68), Expect = 0.51
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 191 MPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 340
MPP T KPV+ +G QW ND + + GI+TV + H P +
Sbjct: 64 MPPRPTRDEDKPVMTPKGDRQW-QANDFGGNIRVPTGILTVLIKHFFPGI 112
>08_02_1545 -
27790328-27790358,27790512-27791110,27791428-27791648,
27791852-27792071
Length = 356
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 474 TVDQKLMNWRLCWRKRTQET*TSYRCRPAT 563
TVD+K W+L W ++ E RCR T
Sbjct: 17 TVDKKKQEWKLTWEEKVVEVLHIVRCRGFT 46
>10_08_0374 -
17312430-17312513,17312794-17313029,17313081-17313261,
17313335-17313445,17313495-17313722,17313862-17313999,
17314159-17314375,17314452-17314564,17314919-17314921
Length = 436
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 191 MPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 340
MPP T KPVL + QW ND + + GI+TV + H P +
Sbjct: 20 MPPRPTRDEDKPVLTPKRDRQW-QANDFGGNIRVPTGILTVLIKHFFPGI 68
>04_03_1035 - 21887562-21890030
Length = 822
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 243 GTCSGYTTTTARDTWICSVESSPSP 317
GTCS Y+ A D ++CS + SP
Sbjct: 87 GTCSPYSAVVAGDGYLCSAAPTSSP 111
>08_02_0459 + 17420156-17420976,17422291-17424199
Length = 909
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 485 LIHCSLNIPRSNPPGA*RLIVRRTHRFS 402
L+H LNIPR P RL++ H FS
Sbjct: 795 LLHLHLNIPRGEPGYEDRLLISGCHGFS 822
>04_01_0363 + 4754650-4755912
Length = 420
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/74 (32%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
Frame = -3
Query: 316 GDGDDSTEQIQXXXXXXXXXXXXXXLGEKHRLLIGVRD*RRHV---NSFHLFYLLVRRSR 146
GDGDD EK ++ G R RR N+ + L V R
Sbjct: 135 GDGDDRRRGATEGGRQAADGDRDDLKNEKEKITEGERGHRRRERRPNAADMATLTVARWE 194
Query: 145 VRSGHEIRRRHFGR 104
RSG E RRR GR
Sbjct: 195 WRSGGEPRRRRGGR 208
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 348 PSKINSMYCGIRPTCTDIRKSM 413
PSK++S++CG + CT +K++
Sbjct: 90 PSKLSSVFCGTQDKCTACKKTV 111
>06_03_0449 + 20907491-20910146,20910313-20910782
Length = 1041
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 389 LYRHPKI---YEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKAYTGNLDIISLQTS 559
++RH K+ Y Y L+ +LP ++ LV +N+L +++ + GNL +SL
Sbjct: 271 VFRHQKLERLYLYENSLSGELPRNVTTANLVEIDLSSNQLGGEISEDF-GNLKNLSLLFL 329
Query: 560 Y 562
Y
Sbjct: 330 Y 330
>04_04_1638 + 34974369-34974764
Length = 131
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +1
Query: 88 RQNVQHGQNAADGFRAQTVHGTFVPTSRTNERSLHAAFNHERL*EAGASH 237
R HG A G R F P + R HAA +R A SH
Sbjct: 61 RHQTSHGAVAGRGLRRNRNTSMFAPPAHGEIRGAHAASKRKRKSNAADSH 110
>06_03_0885 + 25677243-25678157,25681064-25681705
Length = 518
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 191 CKLLSFVLLVGTKVPCTVWARNPSAAFWP 105
CK+L + + GT+V VWA +WP
Sbjct: 387 CKVLGYDVPRGTQVLVNVWAIGRDPRYWP 415
>06_01_0587 -
4211917-4212021,4212250-4212478,4213426-4213759,
4215116-4215186,4215374-4215493,4216353-4216771,
4216885-4217336,4217434-4217812
Length = 702
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/66 (34%), Positives = 28/66 (42%)
Frame = -2
Query: 320 PRRR*RFHRTDPGISCRRCRITTACAPG*EAPASYRRS*LKAACKLLSFVLLVGTKVPCT 141
PRRR R P + CRR + G +A AS RS +AA L +VP
Sbjct: 513 PRRRRRPAPRLPALRCRRQAPAGSGLSGVQAAASPSRSVRRAAASAAPSPSLAACQVPEA 572
Query: 140 VWARNP 123
AR P
Sbjct: 573 PSARAP 578
>02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 192 M*TPFICSTCWYEGPVYGLG 133
M T ICSTC+YE V G+G
Sbjct: 1274 MSTGLICSTCYYEVEVPGVG 1293
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 27.5 bits (58), Expect = 8.3
Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = +1
Query: 136 QTVHGTFVPTSRTNERSLHAAFNHERL*EAGASHPGAHAVVIRQRRQEIPGSVR-WNRHR 312
Q + G +P E RL EAGA P +R RR P S W RH
Sbjct: 147 QAMVGAVMPIGGVREGGQAEPAVPSRLPEAGALVPIHRLKSLRIRRSTPPSSSSWWRRHC 206
Query: 313 LRGPLS 330
R PL+
Sbjct: 207 NRTPLT 212
>11_04_0153 + 14159820-14162417
Length = 865
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 301 NRHRLRGPLSSESKCSPQRSTRCIV 375
N HR RG L+ S S QRSTR +V
Sbjct: 482 NGHRSRGGLADNSGGSSQRSTRPLV 506
>09_04_0189 +
15438538-15438591,15438671-15438891,15438982-15439214,
15439322-15439541,15440091-15440212,15441086-15441339,
15441425-15441532,15441622-15441828,15441929-15442213,
15442312-15442467
Length = 619
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 296 GGIVTVSVGHCHPKVNAALKDQLDVLW 376
GG+V G+ H +V A D++DV+W
Sbjct: 582 GGVVHFLEGYTHHEVGAIDVDRIDVVW 608
>02_05_0003 -
24867053-24867145,24867264-24867437,24867673-24867735,
24868108-24868198,24869579-24869673,24870471-24870668,
24871475-24871648,24872335-24872439,24872645-24872737,
24873688-24873690,24874776-24874844,24875208-24875265,
24875810-24875918,24876603-24876714,24877992-24878204,
24878214-24878546
Length = 660
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 309 VTIPPNRSRYLLPSLSYNHCMCPWV 235
V PP L ++SY HC C W+
Sbjct: 397 VKTPPVPWLVLTDAISYGHCQCQWL 421
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,342,527
Number of Sequences: 37544
Number of extensions: 423943
Number of successful extensions: 1271
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -