BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30065 (699 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 35 0.32 AK223042-1|BAD96762.1| 433|Homo sapiens eukaryotic translation ... 34 0.56 Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 33 0.74 X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 33 0.98 X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 33 0.98 BC034980-1|AAH34980.1| 603|Homo sapiens Unknown (protein for IM... 33 0.98 AL022152-2|CAD27434.1| 1142|Homo sapiens melanoma antigen family... 33 0.98 AF064589-1|AAC18837.1| 1142|Homo sapiens melanoma-associated ant... 33 0.98 AF056334-1|AAC24227.1| 1142|Homo sapiens cancer/testis antigen C... 33 0.98 AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1... 32 1.7 Z34282-1|CAA84036.1| 98|Homo sapiens mucin protein. 31 3.0 Z34276-1|CAA84030.1| 94|Homo sapiens mucin protein. 31 3.0 BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type c... 31 4.0 AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens ... 31 4.0 U31659-1|AAA84390.1| 677|Homo sapiens TAFII80 protein. 31 5.2 L25444-1|AAA63643.1| 677|Homo sapiens TAFII70 protein. 31 5.2 BC018115-1|AAH18115.1| 677|Homo sapiens TAF6 RNA polymerase II,... 31 5.2 AY149894-1|AAN10295.1| 677|Homo sapiens TAF6 RNA polymerase II,... 31 5.2 L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein... 30 6.9 U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating... 30 9.1 BC109300-1|AAI09301.1| 784|Homo sapiens Sp4 transcription facto... 30 9.1 AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein. 30 9.1 AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens ... 30 9.1 >AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein protein. Length = 580 Score = 34.7 bits (76), Expect = 0.32 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 3/97 (3%) Frame = +3 Query: 156 SHVHGTTSMTPTKASPSSTFKRS*RT-WPARATMQVKHQRWPK--PPELSPIYLPVSPVM 326 SH + + TP +ASP+ R+ T P R +++ H+ P PP SP P Sbjct: 206 SH-RASPTRTPPRASPTRRPPRASPTRTPPRESLRTSHRASPTRMPPRASPTRRPPRASP 264 Query: 327 PVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT 437 P + +T + P T P + + PS + +T Sbjct: 265 TGSPPRASPMTPPRASPRTPPRASPTTTPSRASLTRT 301 >AK223042-1|BAD96762.1| 433|Homo sapiens eukaryotic translation elongation factor 1 alpha 1 variant protein. Length = 433 Score = 33.9 bits (74), Expect = 0.56 Identities = 24/69 (34%), Positives = 32/69 (46%) Frame = +2 Query: 302 LSAGIPGDACAAANVINSYTDGVRSGNFAGFRQSLGPFFGHVGQNLNLINQLVTNPGQLR 481 LS +PGD NV N VR GN AG ++ P G +I ++ +PGQ+ Sbjct: 270 LSEALPGDN-VGFNVKNVSVKDVRRGNVAGDSKNDPPMEA-AGFTAQVI--ILNHPGQIS 325 Query: 482 YSVGPALGC 508 P LGC Sbjct: 326 AGYAPVLGC 334 >Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. Length = 279 Score = 33.5 bits (73), Expect = 0.74 Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 4/129 (3%) Frame = +3 Query: 168 GTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTS 347 GTT S +S S + P +T PE +P SPV P TS Sbjct: 157 GTTPSAVPTTSITSVPTTSTNSAPISSTTSATTTSRISGPETTP-----SPV-PTASTTS 210 Query: 348 LTLTQTASGPETSPA----SDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPWVVPE 515 + T T SGP T+P+ + +SVP++ T + + ++S T S P VP Sbjct: 211 ASTTSTTSGPGTTPSPVPTTSTISVPTTSTTSASTTSTTSASTTSTTSGP-GTTPSPVPT 269 Query: 516 VEESMTSKP 542 S TS P Sbjct: 270 T--STTSAP 276 >X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest subunit protein. Length = 1970 Score = 33.1 bits (72), Expect = 0.98 Identities = 37/130 (28%), Positives = 48/130 (36%), Gaps = 5/130 (3%) Frame = +3 Query: 63 QAPTLHHR*PSINTVIMKFHATLMMEKLVP*SHVHGTTSMTPTKASPSSTFKRS*RTWPA 242 Q+PT PS + + T S+ + TPT S T + T P Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPK 1873 Query: 243 RA-TMQVKHQRWPKPPELSPIYLPVSPV-MPVQPLTSLTL-TQTASGPETSPASDNLS-- 407 + T PK SP Y P SPV P P S T T + + P+ SP S S Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933 Query: 408 VPSSDTWDKT 437 P T+ T Sbjct: 1934 SPKGSTYSPT 1943 >X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest subunit protein. Length = 1970 Score = 33.1 bits (72), Expect = 0.98 Identities = 37/130 (28%), Positives = 48/130 (36%), Gaps = 5/130 (3%) Frame = +3 Query: 63 QAPTLHHR*PSINTVIMKFHATLMMEKLVP*SHVHGTTSMTPTKASPSSTFKRS*RTWPA 242 Q+PT PS + + T S+ + TPT S T + T P Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPK 1873 Query: 243 RA-TMQVKHQRWPKPPELSPIYLPVSPV-MPVQPLTSLTL-TQTASGPETSPASDNLS-- 407 + T PK SP Y P SPV P P S T T + + P+ SP S S Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933 Query: 408 VPSSDTWDKT 437 P T+ T Sbjct: 1934 SPKGSTYSPT 1943 >BC034980-1|AAH34980.1| 603|Homo sapiens Unknown (protein for IMAGE:4824581) protein. Length = 603 Score = 33.1 bits (72), Expect = 0.98 Identities = 22/105 (20%), Positives = 48/105 (45%) Frame = +3 Query: 171 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL 350 T+ PT +SP + K S P+ ++M + P + + P ++P +P TS Sbjct: 2 TSPFAPTMSSPKRSSKPSMSLAPSGSSMPTADPKPPASLKSTKSATPNRSLVPTKPATSR 61 Query: 351 TLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDT 485 + S +++ ++ PS+ ++ + S + + V++DT Sbjct: 62 NSVMSPSSSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDT 106 >AL022152-2|CAD27434.1| 1142|Homo sapiens melanoma antigen family C, 1 protein. Length = 1142 Score = 33.1 bits (72), Expect = 0.98 Identities = 33/114 (28%), Positives = 46/114 (40%) Frame = +3 Query: 291 LSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTL 470 LSP+ +P SP+ L+SL Q S PE + L P + S+ S +++ Sbjct: 689 LSPLQIPQSPLEGEDSLSSLHFPQ--SPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSI 746 Query: 471 VNSDTLSDQPWVVPEVEESMTSKPLGMQS*PAVTLVS*MKEYCIVKRLYNSRNS 632 +S T P P ES S P G P VS Y + L +S S Sbjct: 747 CSSSTSLSLPQSFP---ESPQSPPEGPAQSPLQRPVSSFFSYTLASLLQSSHES 797 >AF064589-1|AAC18837.1| 1142|Homo sapiens melanoma-associated antigen protein. Length = 1142 Score = 33.1 bits (72), Expect = 0.98 Identities = 33/114 (28%), Positives = 46/114 (40%) Frame = +3 Query: 291 LSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTL 470 LSP+ +P SP+ L+SL Q S PE + L P + S+ S +++ Sbjct: 689 LSPLQIPQSPLEGEDSLSSLHFPQ--SPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSI 746 Query: 471 VNSDTLSDQPWVVPEVEESMTSKPLGMQS*PAVTLVS*MKEYCIVKRLYNSRNS 632 +S T P P ES S P G P VS Y + L +S S Sbjct: 747 CSSSTSLSLPQSFP---ESPQSPPEGPAQSPLQRPVSSFFSYTLASLLQSSHES 797 >AF056334-1|AAC24227.1| 1142|Homo sapiens cancer/testis antigen CT7 protein. Length = 1142 Score = 33.1 bits (72), Expect = 0.98 Identities = 33/114 (28%), Positives = 46/114 (40%) Frame = +3 Query: 291 LSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTL 470 LSP+ +P SP+ L+SL Q S PE + L P + S+ S +++ Sbjct: 689 LSPLQIPQSPLEGEDSLSSLHFPQ--SPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSI 746 Query: 471 VNSDTLSDQPWVVPEVEESMTSKPLGMQS*PAVTLVS*MKEYCIVKRLYNSRNS 632 +S T P P ES S P G P VS Y + L +S S Sbjct: 747 CSSSTSLSLPQSFP---ESPQSPPEGPAQSPLQRPVSSFFSYTLASLLQSSHES 797 >AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15 protein. Length = 3530 Score = 32.3 bits (70), Expect = 1.7 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +3 Query: 276 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNL 404 PKP L+P L +P +P++P+ + L Q + PET+ S L Sbjct: 2518 PKP--LAPAPLAKAPRLPIKPVAAPVLAQDQASPETTSPSPEL 2558 >Z34282-1|CAA84036.1| 98|Homo sapiens mucin protein. Length = 98 Score = 31.5 bits (68), Expect = 3.0 Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 4/90 (4%) Frame = +3 Query: 168 GTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTS 347 GTT S +S S + P +T PE +P SPV P TS Sbjct: 3 GTTPSAVPTTSITSAPTTSTNSAPISSTTSATTTSRISGPETTP-----SPV-PTASTTS 56 Query: 348 LTLTQTASGPETSPA----SDNLSVPSSDT 425 + T T SGP T+P+ + +SVP++ T Sbjct: 57 ASTTSTTSGPGTTPSPVPTTSTISVPTTST 86 >Z34276-1|CAA84030.1| 94|Homo sapiens mucin protein. Length = 94 Score = 31.5 bits (68), Expect = 3.0 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Frame = +3 Query: 315 SPVMPVQPLTSLTLTQTASGPETSPA----SDNLSVPSSDTWDKT*ILSINSSLTLVNSD 482 SPV P TS + T T SGP T+P+ + +SVP++ T + + ++S T S Sbjct: 5 SPV-PTASTTSASTTSTTSGPGTTPSPVPTTSTISVPTTSTTSASTTSTTSASTTSTTSG 63 Query: 483 TLSDQPWVVPEVEESMTSKP 542 P VP S TS P Sbjct: 64 P-GTTPSPVPTT--STTSAP 80 >BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type containing 10 protein. Length = 434 Score = 31.1 bits (67), Expect = 4.0 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Frame = +3 Query: 276 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQTASGPETSP-ASDNLSV 410 P P ++P+ + V+PV PV QPL +T++ T + T P AS ++ + Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRI 429 >AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens cDNA FLJ14451 fis, clone HEMBB1001834. ). Length = 434 Score = 31.1 bits (67), Expect = 4.0 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Frame = +3 Query: 276 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQTASGPETSP-ASDNLSV 410 P P ++P+ + V+PV PV QPL +T++ T + T P AS ++ + Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRI 429 >U31659-1|AAA84390.1| 677|Homo sapiens TAFII80 protein. Length = 677 Score = 30.7 bits (66), Expect = 5.2 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +3 Query: 162 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 338 V + P + P + F + A +T QV P S PV+ +P VQP Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580 Query: 339 LTSLTLTQTASGPETSPA 392 + L T T + P T+P+ Sbjct: 581 IVKLVSTATTAPPSTAPS 598 >L25444-1|AAA63643.1| 677|Homo sapiens TAFII70 protein. Length = 677 Score = 30.7 bits (66), Expect = 5.2 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +3 Query: 162 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 338 V + P + P + F + A +T QV P S PV+ +P VQP Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580 Query: 339 LTSLTLTQTASGPETSPA 392 + L T T + P T+P+ Sbjct: 581 IVKLVSTATTAPPSTAPS 598 >BC018115-1|AAH18115.1| 677|Homo sapiens TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa protein. Length = 677 Score = 30.7 bits (66), Expect = 5.2 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +3 Query: 162 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 338 V + P + P + F + A +T QV P S PV+ +P VQP Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580 Query: 339 LTSLTLTQTASGPETSPA 392 + L T T + P T+P+ Sbjct: 581 IVKLVSTATTAPPSTAPS 598 >AY149894-1|AAN10295.1| 677|Homo sapiens TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa protein. Length = 677 Score = 30.7 bits (66), Expect = 5.2 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +3 Query: 162 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 338 V + P + P + F + A +T QV P S PV+ +P VQP Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580 Query: 339 LTSLTLTQTASGPETSPA 392 + L T T + P T+P+ Sbjct: 581 IVKLVSTATTAPPSTAPS 598 >L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein protein. Length = 347 Score = 30.3 bits (65), Expect = 6.9 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +3 Query: 273 WPKPPELSPIYLPVSPVMPVQPLTS-LTLTQTASG-PETSPASDNLSVP 413 W PE +Y PV+PV + PL S +TL +S P PAS S P Sbjct: 15 WSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSPYPGGLPASPLPSGP 63 >U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating factor protein. Length = 1404 Score = 29.9 bits (64), Expect = 9.1 Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 10/114 (8%) Frame = +3 Query: 183 TPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQ 362 TPT +T +S P +T ++ + PK E SP P P T +T Sbjct: 859 TPTTTKEPTTIHKS----PDESTPELSAEPTPKALENSPKE-PGVPTTKTPAATKPEMTT 913 Query: 363 TASG----------PETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSD 494 TA PET+ A+ ++ ++ T +KT I ++ T V S T D Sbjct: 914 TAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQD 967 >BC109300-1|AAI09301.1| 784|Homo sapiens Sp4 transcription factor protein. Length = 784 Score = 29.9 bits (64), Expect = 9.1 Identities = 26/78 (33%), Positives = 36/78 (46%) Frame = +3 Query: 324 MPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPW 503 MP P +S T T TAS TS S + V S+DT + +S T+ S T + Sbjct: 314 MPESPSSSTTCTTTAS---TSLTSSDTLVSSADTGQYASTSASSSERTIEESQTPAA--- 367 Query: 504 VVPEVEESMTSKPLGMQS 557 E + S +P GMQ+ Sbjct: 368 TESEAQSSSQLQPNGMQN 385 >AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein. Length = 1404 Score = 29.9 bits (64), Expect = 9.1 Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 10/114 (8%) Frame = +3 Query: 183 TPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQ 362 TPT +T +S P +T ++ + PK E SP P P T +T Sbjct: 859 TPTTTKEPTTIHKS----PDESTPELSAEPTPKALENSPKE-PGVPTTKTPAATKPEMTT 913 Query: 363 TASG----------PETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSD 494 TA PET+ A+ ++ ++ T +KT I ++ T V S T D Sbjct: 914 TAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQD 967 >AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens cDNA FLJ16561 fis, clone SYNOV4003981, moderately similar to Homo sapiens proteoglycan 4, (megakaryocyte stimulating ). Length = 933 Score = 29.9 bits (64), Expect = 9.1 Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 10/114 (8%) Frame = +3 Query: 183 TPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQ 362 TPT +T +S P +T ++ + PK E SP P P T +T Sbjct: 388 TPTTTKEPTTIHKS----PDESTPELSAEPTPKALENSPKE-PGVPTTKTPAATKPEMTT 442 Query: 363 TASG----------PETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSD 494 TA PET+ A+ ++ ++ T +KT I ++ T V S T D Sbjct: 443 TAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQD 496 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 100,435,619 Number of Sequences: 237096 Number of extensions: 2228817 Number of successful extensions: 6774 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 6224 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6761 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 8063224416 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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