Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30065
(699 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45330.1 68416.m04894 lectin protein kinase family protein co... 35 0.060
At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transfera... 34 0.10
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 33 0.24
At5g25820.1 68418.m03064 exostosin family protein contains Pfam ... 32 0.42
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 31 0.97
At1g61080.1 68414.m06877 proline-rich family protein 30 1.3
At2g17550.1 68415.m02031 expressed protein 29 2.2
At5g43560.2 68418.m05326 meprin and TRAF homology domain-contain... 29 3.0
At5g43560.1 68418.m05325 meprin and TRAF homology domain-contain... 29 3.0
At3g51290.1 68416.m05614 proline-rich family protein 29 3.9
At5g66640.1 68418.m08399 LIM domain-containing protein-related c... 28 5.2
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 28 5.2
At2g19860.1 68415.m02322 hexokinase 2 (HXK2) identical to hexoki... 28 5.2
At5g37600.1 68418.m04529 glutamine synthetase, putative similar ... 28 6.8
At3g12200.1 68416.m01521 protein kinase family protein contains ... 28 6.8
At5g24350.1 68418.m02870 expressed protein weak similarity to ne... 27 9.0
At4g23300.1 68417.m03358 protein kinase family protein contains ... 27 9.0
At4g00560.3 68417.m00079 methionine adenosyltransferase regulato... 27 9.0
At4g00560.2 68417.m00078 methionine adenosyltransferase regulato... 27 9.0
At4g00560.1 68417.m00077 methionine adenosyltransferase regulato... 27 9.0
At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putat... 27 9.0
At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putat... 27 9.0
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 27 9.0
>At3g45330.1 68416.m04894 lectin protein kinase family protein
contains Serine/Threonine protein kinases active-site
signature, Prosite:PS00108; contains Pfam profiles
PF00069: Protein kinase domain, PF00139: Legume lectins
beta domain, PF00138: Legume lectins alpha domain
Length = 682
Score = 34.7 bits (76), Expect = 0.060
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +3
Query: 261 KHQRWPKPPELSP---IYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDT 425
+HQR P+ +P + PV +P +TS ++T + SGP SP+S N S+ S T
Sbjct: 618 RHQRLPEFSPNTPGIGVSTPVLMGLPSLAITSSSVTSSVSGPSASPSSANNSMFISHT 675
>At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 478
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = -3
Query: 502 QGWSDRVSELTRVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRV 350
+G++DR+ E + + +D+ ++LSH S +G LS G S +++CV V
Sbjct: 326 EGFNDRIRESGMIVRDWVDQWEILSHESVKGF--LSHCGWNSAQESICVGV 374
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 32.7 bits (71), Expect = 0.24
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +3
Query: 276 PKPPELSPIYLPVSPVMPVQPLTS-LTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSI 452
P PP SP P PV P+ P TS + T S E+ S + P+ D+ D
Sbjct: 811 PPPPVFSP---PPKPVTPLPPATSPMANAPTPSSSESGEISTPVQAPTPDSEDIEAPSDS 867
Query: 453 NSSLTLVNSDTLSDQPWVVPEVEESMTS 536
N S +S S P PEVE + S
Sbjct: 868 NHSPVFKSSPAPS--PDSEPEVEAPVPS 893
>At5g25820.1 68418.m03064 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 654
Score = 31.9 bits (69), Expect = 0.42
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +3
Query: 66 APTLHHR*PSINTVIMKFHATLMMEKLVP*SHVHG-TTSMTPTKASPSSTFKRS*RTWPA 242
APT + + P +N ++K HAT P + + G S+ A+ + +S P
Sbjct: 113 APTANAKAPGLNPSLVKDHATAPSPSANPPAALPGLNPSLVKENATAPAPSVKSPVALPI 172
Query: 243 RATMQVKHQRW-PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNL 404
VK P +P+ LP + P + + TL T+ PE +P N+
Sbjct: 173 LNPSTVKENATAPVASAKAPVALP--SINPSPVMKNETLPTTSKVPERNPTKKNV 225
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 30.7 bits (66), Expect = 0.97
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 171 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL 350
++S++P+ +SPS + + P+ A P P LSP P P PL+SL
Sbjct: 24 SSSLSPSSSSPSLSPSPP-SSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSS-SPLSSL 81
Query: 351 TLTQTASGPETSPAS 395
+ + + S P +SP+S
Sbjct: 82 SPSLSPSPPSSSPSS 96
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +3
Query: 237 PARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSP 389
P A M +KH P PP L P +P+ P P S P P
Sbjct: 462 PPPAVMPLKHFAPPPPPPLPPAVMPLKHFAPPPPTPPAFKPLKGSAPPPPP 512
>At2g17550.1 68415.m02031 expressed protein
Length = 765
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 481 SELTRVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVR 353
+EL R +EL ++QV + V EE + + ++ PD V VR
Sbjct: 546 NELRRQINELESEVQVRTPVEEEPIQEIETIVDLGNPDKVFVR 588
>At5g43560.2 68418.m05326 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 276 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPS 416
P PP P+ P+ P P+ S T TAS + ++ L P+
Sbjct: 759 PAPPMSRPLSAPIIPPTQAAPVISAVQTSTASLARSMSSTGRLGSPT 805
>At5g43560.1 68418.m05325 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 276 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPS 416
P PP P+ P+ P P+ S T TAS + ++ L P+
Sbjct: 759 PAPPMSRPLSAPIIPPTQAAPVISAVQTSTASLARSMSSTGRLGSPT 805
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +3
Query: 276 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWD 431
P PP P P P+ P T+ T T T+S P P S TWD
Sbjct: 74 PPPPPPRP---PPPPLSPGSETTTWTTTTTSSVLPPPPPPPPPPPPPSSTWD 122
>At5g66640.1 68418.m08399 LIM domain-containing protein-related
contains low similarity to Pfam profile PF00412: LIM
domain
Length = 450
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -2
Query: 200 RCFC--RCHRRSPMHVRLRN*LFHHQCRVEFH 111
RC C CHR MH L+ FH C E++
Sbjct: 95 RCLCCFHCHRPFVMHEILKKGKFHIDCYKEYY 126
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +3
Query: 282 PPELSPIYLPVSP-VMP--VQPLTSLTLTQTASGPETSPASDNLSVP 413
PP P Y P +P V P VQP T T T P TSP + P
Sbjct: 100 PPVQPPTYKPPTPTVKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPP 146
>At2g19860.1 68415.m02322 hexokinase 2 (HXK2) identical to
hexokinase 2 [Arabidopsis thaliana] Swiss-Prot:P93834
Length = 502
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 212 VQEILKDMASQGDYASQASAVAQTA-GIIAHLSAGIPGDACAAANVINSYTDGVRSGNFA 388
V EILK A + D A+ + + Q A + + AG+ + + ++ SY D + SG+
Sbjct: 37 VIEILK--AFEEDCATPIAKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPSGDET 94
Query: 389 GFRQSL 406
GF +L
Sbjct: 95 GFFYAL 100
>At5g37600.1 68418.m04529 glutamine synthetase, putative similar to
glutamine synthetase, cytosolic isozyme (Glutamate--
ammonia ligase, GS1) [Lotus japonicus] SWISS-PROT:Q42899
Length = 356
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 422 HVGQNLNLINQLVTNPGQLRYSVGPALGCAGGGRIY 529
+ G N++ IN V PGQ + VGPA+G + I+
Sbjct: 181 YAGINISGINGEVM-PGQWEFQVGPAVGISAADEIW 215
>At3g12200.1 68416.m01521 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 571
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 291 LSPIYLPVSPVMPV 332
LSPIYLPV P+ PV
Sbjct: 283 LSPIYLPVFPIKPV 296
>At5g24350.1 68418.m02870 expressed protein weak similarity to
neuroblastoma-amplified protein [Homo sapiens] GI:4337460
Length = 2376
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +3
Query: 330 VQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPWVV 509
++PL ++ + + P + +P S TW + IL IN + L +D + +
Sbjct: 1726 LEPLQAVEILKRHFTLVLPPNGSYMHIPDSSTWQECLILLINFWIRL--ADEMQEVKSSN 1783
Query: 510 PEVEESMTSKP 542
P + E++T P
Sbjct: 1784 PSLVENLTLSP 1794
>At4g23300.1 68417.m03358 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 660
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -3
Query: 265 CLTCIVALAGHVLQDLLNVEDGDAFVGVIDVVPCT*DYGT-SFSIINVAW 119
C CI AG ++QD +N DA+ +D C Y SFS W
Sbjct: 88 CFNCIKGAAGWLIQDCVN--QTDAYYWALDPTLCLVRYSNISFSGSAAFW 135
>At4g00560.3 68417.m00079 methionine adenosyltransferase regulatory
beta subunit-related contains weak similarity to
methionine adenosyltransferase regulatory beta subunit
(GI:6815285) [Homo sapiens]
Length = 253
Score = 27.5 bits (58), Expect = 9.0
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 264 HQRWPKPPELSPIYLPVSPVMPVQPLTSL---TLTQTASGPETSPASDNLSVPSSDTWDK 434
H P P L + P SP PV + L +++Q P+ LSVP + D
Sbjct: 41 HHSSPLPARLLDAF-PHSPAFPVDLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDP 99
Query: 435 T*ILSINSSLTLVN 476
+SIN +LVN
Sbjct: 100 DSAMSINVPTSLVN 113
>At4g00560.2 68417.m00078 methionine adenosyltransferase regulatory
beta subunit-related contains weak similarity to
methionine adenosyltransferase regulatory beta subunit
(GI:6815285) [Homo sapiens]
Length = 201
Score = 27.5 bits (58), Expect = 9.0
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 264 HQRWPKPPELSPIYLPVSPVMPVQPLTSL---TLTQTASGPETSPASDNLSVPSSDTWDK 434
H P P L + P SP PV + L +++Q P+ LSVP + D
Sbjct: 41 HHSSPLPARLLDAF-PHSPAFPVDLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDP 99
Query: 435 T*ILSINSSLTLVN 476
+SIN +LVN
Sbjct: 100 DSAMSINVPTSLVN 113
>At4g00560.1 68417.m00077 methionine adenosyltransferase regulatory
beta subunit-related contains weak similarity to
methionine adenosyltransferase regulatory beta subunit
(GI:6815285) [Homo sapiens]
Length = 327
Score = 27.5 bits (58), Expect = 9.0
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 264 HQRWPKPPELSPIYLPVSPVMPVQPLTSL---TLTQTASGPETSPASDNLSVPSSDTWDK 434
H P P L + P SP PV + L +++Q P+ LSVP + D
Sbjct: 41 HHSSPLPARLLDAF-PHSPAFPVDLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDP 99
Query: 435 T*ILSINSSLTLVN 476
+SIN +LVN
Sbjct: 100 DSAMSINVPTSLVN 113
>At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profiles PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase, PF01593: amine oxidase, flavin-containing
Length = 867
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 101 YSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD 250
YSD + DID + AW+++ T+K + + IL+++ +
Sbjct: 297 YSDIYLHHDIDLMPRNQAAWSAWNFLGSTEKKVCVTYWLNILQNLGENSE 346
>At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profile PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase
Length = 867
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 101 YSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD 250
YSD + DID + AW+++ T+K + + IL+++ +
Sbjct: 297 YSDIYLHHDIDLMPRNKAAWSAWNFLGSTEKKVCVTYWLNILQNLGENSE 346
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 484 VSELTRVSDELIDKIQVLSHVSEEGTERLSEA-GEVSGPDAVCVRVN 347
+SE +DKI L+ S E RL+EA E++ A+C R++
Sbjct: 138 ISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARSQAMCSRLS 184
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,713,233
Number of Sequences: 28952
Number of extensions: 310701
Number of successful extensions: 1236
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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