Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30064
(604 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68493-5|CAA92800.1| 237|Caenorhabditis elegans Hypothetical pr... 186 1e-47
AL023828-5|CAA19450.1| 260|Caenorhabditis elegans Hypothetical ... 59 2e-09
AL132949-40|CAN99706.1| 329|Caenorhabditis elegans Hypothetical... 36 0.022
AL132949-39|CAB61094.1| 295|Caenorhabditis elegans Hypothetical... 36 0.022
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL132862-19|CAB70231.2| 640|Caenorhabditis elegans Hypothetical... 29 3.4
U41029-3|AAF99952.2| 886|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z70208-11|CAA94144.1| 598|Caenorhabditis elegans Hypothetical p... 28 5.9
Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical pr... 27 7.8
>Z68493-5|CAA92800.1| 237|Caenorhabditis elegans Hypothetical
protein C33A12.7 protein.
Length = 237
Score = 186 bits (452), Expect = 1e-47
Identities = 85/150 (56%), Positives = 108/150 (72%)
Frame = +2
Query: 140 LKSLVPGTKSVIGKDSGAQADIHLLDGDLVRFGSHELLAAATPGHTNGCLTYICHEQSLA 319
LK++ P KSV+ SG +AD ++ DG+++ G +L TPGHTNGCLTY+ H A
Sbjct: 77 LKTVFPTMKSVLSSKSGGEADKYVSDGEIIEIGGLKLEVRETPGHTNGCLTYVEHSLRSA 136
Query: 320 FTGDTLLIRGCGRTDFQEGNSETLYKSVHNRIFTLPDEYVLYPAHDYRGQTATSVAEEKK 499
FTGD LLIR CGRTDFQ+GN +L+ SVH++IFTLP++YV+Y H+Y G T+V EEK
Sbjct: 137 FTGDALLIRACGRTDFQQGNPASLFDSVHDKIFTLPEDYVVYVGHNYNGVLQTTVWEEKN 196
Query: 500 YNPRLTKSLAEFVEIMDNLNLPYPKMINKA 589
NPRLTKS +FVEIM NL L YPK I+KA
Sbjct: 197 LNPRLTKSKDQFVEIMKNLKLNYPKQIDKA 226
>AL023828-5|CAA19450.1| 260|Caenorhabditis elegans Hypothetical
protein Y17G7B.3 protein.
Length = 260
Score = 59.3 bits (137), Expect = 2e-09
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Frame = +2
Query: 170 VIGKDSGAQA-DIHLLDGDLVRFGSHELLAAATPGHTNGCLTY-ICH------EQSLAFT 325
++G DS A D H+ GD+ F ++ +TP HT+G + Y I + + FT
Sbjct: 77 ILGGDSRIPAMDRHVKHGDMAEFAGLQIKCLSTPCHTSGHICYHITNPAADSTSPGVVFT 136
Query: 326 GDTLLIRGCGRTDFQEGNSETLYKSVHNRIFTLPDEYVLYPAHDY 460
GDTL I GCGR F EG + + +++ + LP E ++P H+Y
Sbjct: 137 GDTLFIAGCGR--FFEGTAPQMDVALNEILKNLPVETQIFPGHEY 179
>AL132949-40|CAN99706.1| 329|Caenorhabditis elegans Hypothetical
protein Y53F4B.39b protein.
Length = 329
Score = 35.9 bits (79), Expect = 0.022
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = +2
Query: 143 KSLVPGTKSVIGKDSGAQADIHLLDGDLVRFGSHELLAAATPGHTNGCLTYICHEQSLAF 322
K +P K KD G + ++ DG V L ATPGHT + E+ F
Sbjct: 132 KKKIPIYKMKRDKDEGVERFHYVDDGFEVAVDGATLKLIATPGHTADHFSLWLQEERALF 191
Query: 323 TGDTLLIRGCGRTDFQE 373
+GD +L G G T F++
Sbjct: 192 SGDCIL--GEGTTVFED 206
>AL132949-39|CAB61094.1| 295|Caenorhabditis elegans Hypothetical
protein Y53F4B.39a protein.
Length = 295
Score = 35.9 bits (79), Expect = 0.022
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = +2
Query: 143 KSLVPGTKSVIGKDSGAQADIHLLDGDLVRFGSHELLAAATPGHTNGCLTYICHEQSLAF 322
K +P K KD G + ++ DG V L ATPGHT + E+ F
Sbjct: 98 KKKIPIYKMKRDKDEGVERFHYVDDGFEVAVDGATLKLIATPGHTADHFSLWLQEERALF 157
Query: 323 TGDTLLIRGCGRTDFQE 373
+GD +L G G T F++
Sbjct: 158 SGDCIL--GEGTTVFED 172
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/86 (25%), Positives = 36/86 (41%)
Frame = +3
Query: 198 PISTCSTVTWCGSGATNSSLLRLRATLMDA*LTYVTNSHWRSLVTPS*SGVAAAPTSRRV 377
P +T +T T + T ++ + T T T + + TP+ + A TS
Sbjct: 196 PTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETT 255
Query: 378 TLRPSTNRSTIEYSLCPTSTCCIPRT 455
T P+T T + + PT+T P T
Sbjct: 256 TTTPTT---TTQTTTKPTTTTTTPTT 278
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Frame = +3
Query: 198 PISTCSTVTWCGSGATNSSLLRLRATLMDA*LTYVTNSHWRSLVTPS*SGVAAAPTSR-R 374
P ++ + W + T +S T T T + + T + + PT+
Sbjct: 48 PNTSIISPKWVKADCTTTSTTTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTE 107
Query: 375 VTLRPSTNRSTIEYSLCPTSTCCIPRTIT 461
T P+T +T + PT+T P T T
Sbjct: 108 TTTTPTTETTTTPTTTTPTTTTTTPTTTT 136
>Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical
protein K08E4.3 protein.
Length = 352
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 464 GQTATSVAEEKKYNPRLTKSLAEFVEIMDNLNLPYP 571
G TA +VAE +NPRL++ E+ N P P
Sbjct: 180 GMTAKTVAELTSFNPRLSEGGCEWFGTAPLCNFPCP 215
>AL132862-19|CAB70231.2| 640|Caenorhabditis elegans Hypothetical
protein Y73F8A.25a protein.
Length = 640
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 347 GCGRTDFQEGNSETLYKSVHNRIFTLP 427
GC R D++ G +E Y +HN LP
Sbjct: 225 GCERKDYESGMAEAFYPIMHNAPTQLP 251
>U41029-3|AAF99952.2| 886|Caenorhabditis elegans Hypothetical
protein F47G3.1 protein.
Length = 886
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 413 IFTLPDEYVLYPAHDYRGQTATSVAEEKKYNPRLTKSL 526
+FTLP+ Y L YR + A+ PR+ KSL
Sbjct: 224 VFTLPENYTLESLALYREDKIFACADIVNVEPRILKSL 261
>Z70208-11|CAA94144.1| 598|Caenorhabditis elegans Hypothetical
protein F54B11.11 protein.
Length = 598
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 591 PALFIIFGYGKFKLSMISTNSASDFVNLGLYFFSSATDVAVCP 463
PA ++IF K L++ + +A NL Y TDV P
Sbjct: 152 PAQYLIFYGSKLALTLAANTAAESLKNLDRYMLYIGTDVMQYP 194
>Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical
protein F46G10.2 protein.
Length = 607
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -1
Query: 559 IQIIHDLNE-LGKRLRQSGIVFLLFGDRCRSLPSVIVRGIQHVLVGQSEYSIVDRFVEGL 383
I+I+++ N + ++R I F+ + +IV+GI V +S D VEG
Sbjct: 61 IEILNENNSTVNWKIRPQNIGFMYYVTTSGDGDDLIVKGIVKWKVQLKNWSTNDTVVEGF 120
Query: 382 RVTLLE 365
VT+++
Sbjct: 121 LVTIMD 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,375,131
Number of Sequences: 27780
Number of extensions: 309132
Number of successful extensions: 860
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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