Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30062
(347 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49821 Cluster: NADH dehydrogenase [ubiquinone] flavopr... 140 6e-33
UniRef50_A1ZAW7 Cluster: CG11423-PA; n=2; Drosophila melanogaste... 130 5e-30
UniRef50_A1Z9Z7 Cluster: CG8102-PA, isoform A; n=4; Sophophora|R... 107 7e-23
UniRef50_Q4UKA6 Cluster: NADH-quinone oxidoreductase subunit F; ... 83 2e-15
UniRef50_Q7XZ61 Cluster: NADH dehydrogenase; n=1; Griffithsia ja... 81 5e-15
UniRef50_A2DV30 Cluster: Respiratory-chain NADH dehydrogenase 51... 64 8e-10
UniRef50_Q56222 Cluster: NADH-quinone oxidoreductase subunit 1; ... 54 5e-07
UniRef50_Q1IS37 Cluster: NADH-quinone oxidoreductase, F subunit;... 51 6e-06
UniRef50_Q9WY70 Cluster: NADP-reducing hydrogenase, subunit C; n... 50 1e-05
UniRef50_A6GJI0 Cluster: Putative NADH dehydrogenase I chain F; ... 50 1e-05
UniRef50_Q8F7Q4 Cluster: NADH dehydrogenase I, F subunit; n=9; B... 48 6e-05
UniRef50_Q2LYA9 Cluster: NADH:ubiquinone oxidoreductase, NADH-bi... 47 8e-05
UniRef50_Q1IZW8 Cluster: NADH-quinone oxidoreductase, F subunit;... 47 8e-05
UniRef50_Q2AFM4 Cluster: Respiratory-chain NADH dehydrogenase do... 47 1e-04
UniRef50_A4MHV7 Cluster: NADH dehydrogenase; n=5; Bacteria|Rep: ... 46 2e-04
UniRef50_Q8RBC9 Cluster: NADH:ubiquinone oxidoreductase, NADH-bi... 45 3e-04
UniRef50_Q9XAQ9 Cluster: NADH-quinone oxidoreductase subunit F; ... 45 3e-04
UniRef50_O27592 Cluster: NADP-reducing hydrogenase, subunit C; n... 45 4e-04
UniRef50_Q4AEJ7 Cluster: Hydrogen dehydrogenase; n=1; Chlorobium... 44 5e-04
UniRef50_Q1PZQ6 Cluster: Similar to NADH dehydrogenase I chain F... 44 5e-04
UniRef50_Q2AG83 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding:... 44 7e-04
UniRef50_A7CUG0 Cluster: NADH dehydrogenase; n=1; Opitutaceae ba... 44 7e-04
UniRef50_A6FCN1 Cluster: NuoF2 NADH I CHAIN F; n=1; Moritella sp... 44 7e-04
UniRef50_A5UVG4 Cluster: NADH-quinone oxidoreductase, F subunit;... 44 7e-04
UniRef50_Q9I0J7 Cluster: NADH-quinone oxidoreductase subunit F; ... 44 7e-04
UniRef50_Q7WMR8 Cluster: NAD-dependent formate dehydrogenase bet... 44 0.001
UniRef50_A6PMG7 Cluster: NADH dehydrogenase (Quinone) precursor;... 44 0.001
UniRef50_A1ALP4 Cluster: NADH dehydrogenase; n=1; Pelobacter pro... 44 0.001
UniRef50_P56913 Cluster: NADH-quinone oxidoreductase subunit F 2... 44 0.001
UniRef50_Q8ABI5 Cluster: NADH:ubiquinone oxidoreductase subunit;... 43 0.001
UniRef50_Q6AQG1 Cluster: Probable NADP-reducing hydrogenase, 51 ... 43 0.002
UniRef50_Q2S5I8 Cluster: Respiratory-chain NADH dehydrogenase 51... 43 0.002
UniRef50_P74024 Cluster: Hydrogenase subunit; n=13; Bacteria|Rep... 42 0.002
UniRef50_Q3A639 Cluster: NADH:ubiquinone oxidoreductase, NADH-bi... 42 0.003
UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=... 42 0.004
UniRef50_A5FSK8 Cluster: NADH dehydrogenase; n=3; Dehalococcoide... 41 0.005
UniRef50_A5FXJ6 Cluster: NADH dehydrogenase; n=1; Acidiphilium c... 41 0.007
UniRef50_Q2C5T6 Cluster: NADH dehydrogenase I, F subunit; n=2; V... 40 0.012
UniRef50_A3EW61 Cluster: NADH ubiquinone oxidoreductase; n=1; Le... 40 0.012
UniRef50_Q67JR5 Cluster: NADH dehydrogenase subunit; n=1; Symbio... 40 0.016
UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=... 40 0.016
UniRef50_O94500 Cluster: Iron sulfur cluster assembly protein; n... 40 0.016
UniRef50_Q6MDR1 Cluster: Probable NADH-ubiquinone oxidoreductase... 38 0.036
UniRef50_Q1V283 Cluster: NAD-dependent formate dehydrogenase bet... 38 0.036
UniRef50_O66841 Cluster: NADH-quinone oxidoreductase subunit F; ... 38 0.036
UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreducta... 38 0.063
UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 38 0.063
UniRef50_UPI0000384AE3 Cluster: COG1894: NADH:ubiquinone oxidore... 37 0.083
UniRef50_O96948 Cluster: Hydrogenase; n=14; Eukaryota|Rep: Hydro... 37 0.083
UniRef50_Q1VMJ2 Cluster: Formate dehydrogenase, beta subunit; n=... 37 0.11
UniRef50_A1WBG0 Cluster: NADH dehydrogenase (Quinone) precursor;... 37 0.11
UniRef50_Q6N1Z2 Cluster: NADH-ubiquinone dehydrogenase chain F; ... 36 0.15
UniRef50_Q5FP48 Cluster: Outer membrane protein; n=2; Gluconobac... 36 0.15
UniRef50_A1HDX5 Cluster: NADH dehydrogenase; n=4; Ralstonia pick... 36 0.25
UniRef50_A0RMD3 Cluster: NADH-quinone oxidoreductase chain f; n=... 36 0.25
UniRef50_Q835I8 Cluster: NAD-dependent formate dehydrogenase, be... 35 0.34
UniRef50_Q3ZXP7 Cluster: Hydrogenase subunit HymB; n=7; Bacteria... 35 0.34
UniRef50_A0NMW4 Cluster: NADH:ubiquinone oxidoreductase, NADH-bi... 35 0.34
UniRef50_Q746S7 Cluster: NADH dehydrogenase I, F subunit; n=7; D... 35 0.44
UniRef50_A7IMB3 Cluster: NADH dehydrogenase; n=3; Proteobacteria... 35 0.44
UniRef50_Q82NN9 Cluster: Putative uncharacterized protein; n=1; ... 34 0.59
UniRef50_Q603S6 Cluster: NAD-reducing hydrogenase, alpha subunit... 34 0.59
UniRef50_Q6LTT0 Cluster: Hypothetical type I restriction-modific... 33 1.0
UniRef50_Q5P4U3 Cluster: Formate dehydrogenase, NAD(P) reducing,... 33 1.4
UniRef50_Q3YL96 Cluster: CdiA; n=3; Escherichia coli|Rep: CdiA -... 33 1.8
UniRef50_Q4S2P1 Cluster: Chromosome 17 SCAF14760, whole genome s... 32 2.4
UniRef50_Q1EUM7 Cluster: Respiratory-chain NADH dehydrogenase do... 32 3.1
UniRef50_Q384F1 Cluster: Putative uncharacterized protein; n=1; ... 32 3.1
UniRef50_Q8C4U5 Cluster: 10 days neonate cerebellum cDNA, RIKEN ... 31 4.1
UniRef50_Q44SY7 Cluster: Electron transport complex, RnfABCDGE t... 31 4.1
UniRef50_Q0JCI4 Cluster: Os04g0468100 protein; n=1; Oryza sativa... 31 4.1
UniRef50_Q2W3V4 Cluster: Molybdopterin-guanine dinucleotide bios... 31 5.5
UniRef50_Q1J1X2 Cluster: Putative uncharacterized protein; n=1; ... 31 5.5
UniRef50_Q0G2D8 Cluster: Putative uncharacterized protein; n=1; ... 31 5.5
UniRef50_Q01QP7 Cluster: Putative uncharacterized protein; n=3; ... 31 5.5
UniRef50_A7G5W1 Cluster: NADH dehydrogenase family protein; n=4;... 31 5.5
UniRef50_Q18454 Cluster: Putative uncharacterized protein; n=2; ... 31 5.5
UniRef50_UPI0000D57748 Cluster: PREDICTED: similar to chromodoma... 31 7.2
UniRef50_Q9PDL6 Cluster: Soluble lytic murein transglycosylase; ... 31 7.2
UniRef50_Q8G5I7 Cluster: Transcription-repair coupling factor; n... 31 7.2
UniRef50_A1SU84 Cluster: Hydrogenase, NADP-reducing subunit C; n... 31 7.2
UniRef50_A0H3P0 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_Q9ZWD7 Cluster: F20N2.12; n=1; Arabidopsis thaliana|Rep... 31 7.2
UniRef50_Q7S2N1 Cluster: Putative uncharacterized protein NCU093... 31 7.2
UniRef50_Q5KED1 Cluster: Osmosensor, putative; n=2; Filobasidiel... 31 7.2
UniRef50_UPI00006CFBB4 Cluster: Protein kinase domain containing... 30 9.5
UniRef50_Q8KE19 Cluster: Putative uncharacterized protein; n=1; ... 30 9.5
UniRef50_Q7U8L8 Cluster: Possible N-terminal part of IF-2; n=1; ... 30 9.5
UniRef50_A6DPP5 Cluster: Serine/threonine protein kinase; n=1; L... 30 9.5
UniRef50_A4W4W3 Cluster: Filamentous haemagglutinin family outer... 30 9.5
UniRef50_Q1JSB2 Cluster: SWI/SNF family transcriptional activato... 30 9.5
UniRef50_Q17CQ2 Cluster: Putative uncharacterized protein; n=1; ... 30 9.5
>UniRef50_P49821 Cluster: NADH dehydrogenase [ubiquinone]
flavoprotein 1, mitochondrial precursor; n=215; cellular
organisms|Rep: NADH dehydrogenase [ubiquinone]
flavoprotein 1, mitochondrial precursor - Homo sapiens
(Human)
Length = 464
Score = 140 bits (339), Expect = 6e-33
Identities = 61/84 (72%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Frame = +3
Query: 99 VPVRFQ-QTQAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDW 275
V VRF T AP K +G L D DR+FTNLYGRH+WRLKG+L+RGDWY TKEILLKG DW
Sbjct: 16 VSVRFSGDTTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDW 75
Query: 276 IVNEMKTSGLRGRGGAGLPTGMKW 347
I+ E+KTSGLRGRGGAG PTG+KW
Sbjct: 76 ILGEIKTSGLRGRGGAGFPTGLKW 99
>UniRef50_A1ZAW7 Cluster: CG11423-PA; n=2; Drosophila
melanogaster|Rep: CG11423-PA - Drosophila melanogaster
(Fruit fly)
Length = 702
Score = 130 bits (315), Expect = 5e-30
Identities = 53/72 (73%), Positives = 63/72 (87%)
Frame = +3
Query: 132 SKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRG 311
+K +GPLAD+DR+FTNLYGRH+WRLK A+ RGDWY TKEI+ KG WIVNE+KTSGLRG
Sbjct: 251 TKTTFGPLADADRIFTNLYGRHDWRLKAAMKRGDWYKTKEIIAKGDKWIVNEIKTSGLRG 310
Query: 312 RGGAGLPTGMKW 347
RGGAG P+G+KW
Sbjct: 311 RGGAGFPSGLKW 322
>UniRef50_A1Z9Z7 Cluster: CG8102-PA, isoform A; n=4; Sophophora|Rep:
CG8102-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 481
Score = 107 bits (256), Expect = 7e-23
Identities = 44/71 (61%), Positives = 54/71 (76%)
Frame = +3
Query: 135 KDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGR 314
K K+GPL D DRVF NLYGRH+WRL GA RGDW+ T E+L +G +WI+ ++ SGLRGR
Sbjct: 52 KTKFGPLDDCDRVFQNLYGRHDWRLHGACQRGDWHRTAELLEQGPEWIMKQVSKSGLRGR 111
Query: 315 GGAGLPTGMKW 347
GGAG G+KW
Sbjct: 112 GGAGFYAGLKW 122
>UniRef50_Q4UKA6 Cluster: NADH-quinone oxidoreductase subunit F;
n=11; Proteobacteria|Rep: NADH-quinone oxidoreductase
subunit F - Rickettsia felis (Rickettsia azadi)
Length = 422
Score = 82.6 bits (195), Expect = 2e-15
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +3
Query: 153 LADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLP 332
L + D++FTNL+G+ LK + RGDW TK +L KG ++I+ E+K SGLRGRGGAG
Sbjct: 2 LKEEDKIFTNLHGQQSHDLKSSKKRGDWDNTKALLDKGREFIIEEVKKSGLRGRGGAGFS 61
Query: 333 TGMKW 347
TGMKW
Sbjct: 62 TGMKW 66
>UniRef50_Q7XZ61 Cluster: NADH dehydrogenase; n=1; Griffithsia
japonica|Rep: NADH dehydrogenase - Griffithsia japonica
(Red alga)
Length = 170
Score = 81.0 bits (191), Expect = 5e-15
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = +3
Query: 144 YGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGA 323
+G L+D DR+FTNLY +WRLKGA+ RGDW++TK+++ G WI++E+K R GA
Sbjct: 54 HGGLSDKDRIFTNLYRDGDWRLKGAMKRGDWHMTKDLVQMGRSWILSEIKAVRPARRAGA 113
Query: 324 -GLPTGMKW 347
G P+G+K+
Sbjct: 114 PGFPSGLKY 122
>UniRef50_A2DV30 Cluster: Respiratory-chain NADH dehydrogenase 51 Kd
subunit family protein; n=1; Trichomonas vaginalis
G3|Rep: Respiratory-chain NADH dehydrogenase 51 Kd
subunit family protein - Trichomonas vaginalis G3
Length = 425
Score = 63.7 bits (148), Expect = 8e-10
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +3
Query: 165 DRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMK 344
DR+FTN+ G E L+ + RGDW T++I+ G +I++E++ S LRGR GAGL T K
Sbjct: 15 DRIFTNINGVDESDLQSCMKRGDWNDTQKIIANGKKYILDEVRKSELRGRSGAGLLTYKK 74
Query: 345 W 347
W
Sbjct: 75 W 75
>UniRef50_Q56222 Cluster: NADH-quinone oxidoreductase subunit 1;
n=6; Bacteria|Rep: NADH-quinone oxidoreductase subunit 1
- Thermus thermophilus (strain HB8 / ATCC 27634 / DSM
579)
Length = 438
Score = 54.4 bits (125), Expect = 5e-07
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +3
Query: 201 WRLKGALARGDWYLTKEILLKGT-DWIVNEMKTSGLRGRGGAGLPTGMKW 347
W L L G + K +L + T D ++ E+K SGLRGRGGAG PTG+KW
Sbjct: 27 WTLDYYLRHGGYETAKRVLKEKTPDEVIEEVKRSGLRGRGGAGFPTGLKW 76
>UniRef50_Q1IS37 Cluster: NADH-quinone oxidoreductase, F subunit;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase, F
subunit - Acidobacteria bacterium (strain Ellin345)
Length = 439
Score = 50.8 bits (116), Expect = 6e-06
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +3
Query: 159 DSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTG 338
D +V ++ +G+ + L + ++ L D I+NE+K S LRGRGGAG PTG
Sbjct: 9 DEVKVISSRWGKGATDIDRYLELDGYKAVQKALTMTPDAIINEVKASNLRGRGGAGFPTG 68
Query: 339 MKW 347
+KW
Sbjct: 69 LKW 71
>UniRef50_Q9WY70 Cluster: NADP-reducing hydrogenase, subunit C; n=9;
Bacteria|Rep: NADP-reducing hydrogenase, subunit C -
Thermotoga maritima
Length = 545
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +3
Query: 204 RLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
R++ +AR ++ + L I+ E+K SGLRGRGGAG PTG+KW
Sbjct: 124 RIEEYIARDGYFALAKALQMEPGEIIEEIKRSGLRGRGGAGFPTGLKW 171
>UniRef50_A6GJI0 Cluster: Putative NADH dehydrogenase I chain F;
n=1; Plesiocystis pacifica SIR-1|Rep: Putative NADH
dehydrogenase I chain F - Plesiocystis pacifica SIR-1
Length = 503
Score = 50.0 bits (114), Expect = 1e-05
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +3
Query: 261 KGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
+G DWI+ ++KTSGL+GRGGAG P +KW
Sbjct: 143 EGPDWIIEQLKTSGLQGRGGAGFPAHIKW 171
>UniRef50_Q8F7Q4 Cluster: NADH dehydrogenase I, F subunit; n=9;
Bacteria|Rep: NADH dehydrogenase I, F subunit -
Leptospira interrogans
Length = 443
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +3
Query: 246 KEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
K+ L D I+ E+K SGLRGRGGAG PTG+KW
Sbjct: 32 KKALQMKPDDIIAEVKKSGLRGRGGAGFPTGLKW 65
>UniRef50_Q2LYA9 Cluster: NADH:ubiquinone oxidoreductase,
NADH-binding subunit; n=3; cellular organisms|Rep:
NADH:ubiquinone oxidoreductase, NADH-binding subunit -
Syntrophus aciditrophicus (strain SB)
Length = 637
Score = 47.2 bits (107), Expect = 8e-05
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 219 LARGDWY-LTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
+ARG + L K + + ++ E+KTSGLRGRGG G PTG KW
Sbjct: 175 IARGGYTALHKALTTMSPEDVILEVKTSGLRGRGGGGFPTGTKW 218
>UniRef50_Q1IZW8 Cluster: NADH-quinone oxidoreductase, F subunit;
n=1; Deinococcus geothermalis DSM 11300|Rep:
NADH-quinone oxidoreductase, F subunit - Deinococcus
geothermalis (strain DSM 11300)
Length = 446
Score = 47.2 bits (107), Expect = 8e-05
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3
Query: 201 WRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
W L L G + + D ++ E+K SGLRGRGGAG TG+KW
Sbjct: 33 WTLDFYLRHGGYQGVRRAFALRPDAVIEEVKKSGLRGRGGAGFATGLKW 81
>UniRef50_Q2AFM4 Cluster: Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit; n=2; Bacteria|Rep:
Respiratory-chain NADH dehydrogenase domain, 51 kDa
subunit - Halothermothrix orenii H 168
Length = 408
Score = 46.8 bits (106), Expect = 1e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 276 IVNEMKTSGLRGRGGAGLPTGMKW 347
I+ E+K SGLRGRGGAG PTG+KW
Sbjct: 34 IIEELKKSGLRGRGGAGFPTGLKW 57
>UniRef50_A4MHV7 Cluster: NADH dehydrogenase; n=5; Bacteria|Rep:
NADH dehydrogenase - Geobacter bemidjiensis Bem
Length = 593
Score = 46.0 bits (104), Expect = 2e-04
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +3
Query: 276 IVNEMKTSGLRGRGGAGLPTGMKW 347
+++E+K SGLRGRGG G PTGMKW
Sbjct: 153 VIDEVKKSGLRGRGGGGFPTGMKW 176
>UniRef50_Q8RBC9 Cluster: NADH:ubiquinone oxidoreductase,
NADH-binding (51 kD) subunit; n=11; Bacteria|Rep:
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD)
subunit - Thermoanaerobacter tengcongensis
Length = 596
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +3
Query: 207 LKGALARGDWYLTKEILLKGT-DWIVNEMKTSGLRGRGGAGLPTGMKW 347
++ A+A + ++L + T + ++ E+K SGLRGRGG G PTG+KW
Sbjct: 130 IREAIAFDGYKALAKVLTEMTPEQVIEEVKKSGLRGRGGGGFPTGVKW 177
>UniRef50_Q9XAQ9 Cluster: NADH-quinone oxidoreductase subunit F;
n=32; Bacteria|Rep: NADH-quinone oxidoreductase subunit
F - Streptomyces coelicolor
Length = 449
Score = 45.2 bits (102), Expect = 3e-04
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +3
Query: 246 KEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
++ L D ++ +K SGLRGRGGAG PTGMKW
Sbjct: 46 RKALAMAPDDLIAYVKESGLRGRGGAGFPTGMKW 79
>UniRef50_O27592 Cluster: NADP-reducing hydrogenase, subunit C; n=4;
cellular organisms|Rep: NADP-reducing hydrogenase,
subunit C - Methanobacterium thermoautotrophicum
Length = 630
Score = 44.8 bits (101), Expect = 4e-04
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +3
Query: 219 LARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
LA G + L D ++ E+K SGLRGRGGAG PT +KW
Sbjct: 152 LATGGYRGLMRALEMEPDEVIEEVKDSGLRGRGGAGFPTWLKW 194
>UniRef50_Q4AEJ7 Cluster: Hydrogen dehydrogenase; n=1; Chlorobium
phaeobacteroides BS1|Rep: Hydrogen dehydrogenase -
Chlorobium phaeobacteroides BS1
Length = 497
Score = 44.4 bits (100), Expect = 5e-04
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Frame = +3
Query: 204 RLKGALARGDWYL---TKEILLK-GTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
R KGAL D+ L KEIL + I++ + S +RGRGGAG PTG+KW
Sbjct: 116 RRKGALLNHDYPLFSVIKEILPNTSAEEIIDIVSESNIRGRGGAGFPTGLKW 167
>UniRef50_Q1PZQ6 Cluster: Similar to NADH dehydrogenase I chain F
(1st module) EC: 1.6.5.3; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to NADH dehydrogenase I
chain F (1st module) EC: 1.6.5.3 - Candidatus Kuenenia
stuttgartiensis
Length = 675
Score = 44.4 bits (100), Expect = 5e-04
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3
Query: 276 IVNEMKTSGLRGRGGAGLPTGMKW 347
IV E+ SGLRGRGGAG PTG+KW
Sbjct: 263 IVTELLASGLRGRGGAGFPTGVKW 286
>UniRef50_Q2AG83 Cluster: 4Fe-4S ferredoxin, iron-sulfur
binding:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit; n=4; Bacteria|Rep: 4Fe-4S ferredoxin,
iron-sulfur binding:Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit - Halothermothrix orenii H 168
Length = 632
Score = 44.0 bits (99), Expect = 7e-04
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +3
Query: 123 QAPSKDKYGPL-ADSDRVFTNLYGRHEWR-LKGALARGDWY-LTKEILLKGTDWIVNEMK 293
+A S +K P A+ +R+ + G + L LA G + L+K +L + + E+
Sbjct: 136 EAYSNEKEIPFYANQNRIALSNCGNIDPEDLDDYLAHGGYKALSKALLEMSPEEVCKEVT 195
Query: 294 TSGLRGRGGAGLPTGMKW 347
SGLRGRGG G PTG KW
Sbjct: 196 ESGLRGRGGGGFPTGKKW 213
>UniRef50_A7CUG0 Cluster: NADH dehydrogenase; n=1; Opitutaceae
bacterium TAV2|Rep: NADH dehydrogenase - Opitutaceae
bacterium TAV2
Length = 478
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +3
Query: 219 LARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
L G + + K + + + + +E+K SG+RGRGGAG P G+KW
Sbjct: 41 LRNGGYEILKRAVARKPEDLRDEVKKSGIRGRGGAGFPCGVKW 83
>UniRef50_A6FCN1 Cluster: NuoF2 NADH I CHAIN F; n=1; Moritella sp.
PE36|Rep: NuoF2 NADH I CHAIN F - Moritella sp. PE36
Length = 425
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 240 LTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
L K + D +++ +K S LRGRGGAG PTG+KW
Sbjct: 30 LKKILTTYSPDKVIDAVKASNLRGRGGAGFPTGLKW 65
>UniRef50_A5UVG4 Cluster: NADH-quinone oxidoreductase, F subunit;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase, F
subunit - Roseiflexus sp. RS-1
Length = 449
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3
Query: 276 IVNEMKTSGLRGRGGAGLPTGMKW 347
IV +K SGLRGRGGAG PTG+KW
Sbjct: 61 IVQTVKDSGLRGRGGAGFPTGVKW 84
>UniRef50_Q9I0J7 Cluster: NADH-quinone oxidoreductase subunit F;
n=78; Bacteria|Rep: NADH-quinone oxidoreductase subunit
F - Pseudomonas aeruginosa
Length = 448
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 246 KEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
K + D IV +K SGL+GRGGAG PTG+KW
Sbjct: 48 KALTQMAQDDIVQTVKDSGLKGRGGAGFPTGVKW 81
>UniRef50_Q7WMR8 Cluster: NAD-dependent formate dehydrogenase beta
subunit; n=107; Bacteria|Rep: NAD-dependent formate
dehydrogenase beta subunit - Bordetella bronchiseptica
(Alcaligenes bronchisepticus)
Length = 526
Score = 43.6 bits (98), Expect = 0.001
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +3
Query: 255 LLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
L + IV+E+ SGLRGRGGA PTG+KW
Sbjct: 140 LAMSAEQIVDEVSASGLRGRGGAAFPTGIKW 170
>UniRef50_A6PMG7 Cluster: NADH dehydrogenase (Quinone) precursor;
n=1; Victivallis vadensis ATCC BAA-548|Rep: NADH
dehydrogenase (Quinone) precursor - Victivallis vadensis
ATCC BAA-548
Length = 573
Score = 43.6 bits (98), Expect = 0.001
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3
Query: 276 IVNEMKTSGLRGRGGAGLPTGMKW 347
+V+E+K SGLRGRGG G PTG KW
Sbjct: 136 VVDEVKLSGLRGRGGGGFPTGNKW 159
>UniRef50_A1ALP4 Cluster: NADH dehydrogenase; n=1; Pelobacter
propionicus DSM 2379|Rep: NADH dehydrogenase -
Pelobacter propionicus (strain DSM 2379)
Length = 427
Score = 43.6 bits (98), Expect = 0.001
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 162 SDRVFTNL-YGRHEWRLKGALARGDWYLTKEIL--LKGTDWIVNEMKTSGLRGRGGAGLP 332
S+R+F N LK RG + + L L+ D + E+ SGLRGRGGAG P
Sbjct: 3 SERIFFNFPVTADSHTLKAYQGRGGYQALENALKTLQPID-VEKEVMASGLRGRGGAGFP 61
Query: 333 TGMKW 347
TG KW
Sbjct: 62 TGSKW 66
>UniRef50_P56913 Cluster: NADH-quinone oxidoreductase subunit F 2;
n=100; Proteobacteria|Rep: NADH-quinone oxidoreductase
subunit F 2 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 421
Score = 43.6 bits (98), Expect = 0.001
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +3
Query: 270 DWIVNEMKTSGLRGRGGAGLPTGMKW 347
D IV +K S LRGRGGAG PTGMKW
Sbjct: 40 DEIVELVKESNLRGRGGAGFPTGMKW 65
>UniRef50_Q8ABI5 Cluster: NADH:ubiquinone oxidoreductase subunit;
n=91; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase subunit - Bacteroides thetaiotaomicron
Length = 635
Score = 43.2 bits (97), Expect = 0.001
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 219 LARGDWYLTKEILL-KGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
+AR ++ + LL K +++ +K SGLRGRGG G PTG+KW
Sbjct: 173 IAREGYFALADCLLNKQPADVIDIIKRSGLRGRGGGGFPTGLKW 216
>UniRef50_Q6AQG1 Cluster: Probable NADP-reducing hydrogenase, 51 kDa
subunit; n=1; Desulfotalea psychrophila|Rep: Probable
NADP-reducing hydrogenase, 51 kDa subunit - Desulfotalea
psychrophila
Length = 634
Score = 42.7 bits (96), Expect = 0.002
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 231 DWYLTKE-ILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
D YL E L +G D ++ E+K S LRGRGG G P KW
Sbjct: 166 DGYLALEKSLQEGPDMVLTEIKKSALRGRGGGGFPAARKW 205
>UniRef50_Q2S5I8 Cluster: Respiratory-chain NADH dehydrogenase 51 Kd
subunit family; n=2; Sphingobacteriales genera incertae
sedis|Rep: Respiratory-chain NADH dehydrogenase 51 Kd
subunit family - Salinibacter ruber (strain DSM 13855)
Length = 464
Score = 42.7 bits (96), Expect = 0.002
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 276 IVNEMKTSGLRGRGGAGLPTGMKW 347
+ +E+K SGL GRGGAG PTG+KW
Sbjct: 68 VTDEVKASGLTGRGGAGFPTGIKW 91
>UniRef50_P74024 Cluster: Hydrogenase subunit; n=13; Bacteria|Rep:
Hydrogenase subunit - Synechocystis sp. (strain PCC
6803)
Length = 533
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3
Query: 276 IVNEMKTSGLRGRGGAGLPTGMKW 347
++ EM SGLRGRGG G PTG+KW
Sbjct: 160 VIVEMNKSGLRGRGGGGYPTGLKW 183
>UniRef50_Q3A639 Cluster: NADH:ubiquinone oxidoreductase,
NADH-binding (51 kD) subunit; n=1; Pelobacter
carbinolicus DSM 2380|Rep: NADH:ubiquinone
oxidoreductase, NADH-binding (51 kD) subunit -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 571
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 246 KEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
K + ++ ++NE SGLRGRGGAG P G+KW
Sbjct: 183 KALTEMSSEEVINEAIGSGLRGRGGAGFPIGLKW 216
>UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=2;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 638
Score = 41.5 bits (93), Expect = 0.004
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 219 LARGDWYLTKEILLK-GTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
L +G + K+ L + D ++ +K SGLRGRGGAG P G+KW
Sbjct: 229 LEKGGYAAIKKALAEYQPDDVIAIVKDSGLRGRGGAGFPAGVKW 272
>UniRef50_A5FSK8 Cluster: NADH dehydrogenase; n=3;
Dehalococcoides|Rep: NADH dehydrogenase -
Dehalococcoides sp. BAV1
Length = 417
Score = 41.1 bits (92), Expect = 0.005
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +3
Query: 219 LARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
LA G + K+ L + ++ E+K S L GRGGA PTG+KW
Sbjct: 23 LADGGYQALKKALSMTPEEVIAEVKRSKLVGRGGAAFPTGLKW 65
>UniRef50_A5FXJ6 Cluster: NADH dehydrogenase; n=1; Acidiphilium
cryptum JF-5|Rep: NADH dehydrogenase - Acidiphilium
cryptum (strain JF-5)
Length = 434
Score = 40.7 bits (91), Expect = 0.007
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 153 LADSDRVFTNLY--GRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAG 326
+A +DR T+ GR + G G + ++ + +V E+K + +RGRGGAG
Sbjct: 1 MAMADRPLTSYIQPGRQPLDIAGYERAGGYAAMRKAFGMSPESVVEEVKRAKVRGRGGAG 60
Query: 327 LPTGMKW 347
P G KW
Sbjct: 61 FPAGRKW 67
>UniRef50_Q2C5T6 Cluster: NADH dehydrogenase I, F subunit; n=2;
Vibrionaceae|Rep: NADH dehydrogenase I, F subunit -
Photobacterium sp. SKA34
Length = 427
Score = 39.9 bits (89), Expect = 0.012
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3
Query: 228 GDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
G + I+ + + ++ E+K SGLRG GG G PTG+KW
Sbjct: 24 GGYQSLNSIIGQPREPLLAELKASGLRGCGGGGFPTGVKW 63
>UniRef50_A3EW61 Cluster: NADH ubiquinone oxidoreductase; n=1;
Leptospirillum sp. Group II UBA|Rep: NADH ubiquinone
oxidoreductase - Leptospirillum sp. Group II UBA
Length = 453
Score = 39.9 bits (89), Expect = 0.012
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 279 VNEMKTSGLRGRGGAGLPTGMKW 347
+ E+K +GLRGRGG+G PT +KW
Sbjct: 57 IEELKEAGLRGRGGSGFPTAIKW 79
>UniRef50_Q67JR5 Cluster: NADH dehydrogenase subunit; n=1;
Symbiobacterium thermophilum|Rep: NADH dehydrogenase
subunit - Symbiobacterium thermophilum
Length = 394
Score = 39.5 bits (88), Expect = 0.016
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 222 ARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGA--GLPTGMKW 347
ARG + + +G+ W++ ++ +GLRGRGG+ G P G KW
Sbjct: 21 ARGGYAGLEAARTRGSGWVLEQVTRAGLRGRGGSGDGRPIGQKW 64
>UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=1;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 574
Score = 39.5 bits (88), Expect = 0.016
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 276 IVNEMKTSGLRGRGGAGLPTGMKW 347
I+ E+K + LRGRGGAG P G+KW
Sbjct: 211 ILEEVKKANLRGRGGAGFPAGVKW 234
>UniRef50_O94500 Cluster: Iron sulfur cluster assembly protein; n=1;
Schizosaccharomyces pombe|Rep: Iron sulfur cluster
assembly protein - Schizosaccharomyces pombe (Fission
yeast)
Length = 452
Score = 39.5 bits (88), Expect = 0.016
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +3
Query: 168 RVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMK 344
R+F NL + R+ ALA G++ EIL I+ ++ S LRGRG G PTG K
Sbjct: 33 RMFPNLIEKRIRRIDDALADGEYENLSEILKYDPLNIIELVQESELRGRGRYGFPTGEK 91
>UniRef50_Q6MDR1 Cluster: Probable NADH-ubiquinone oxidoreductase
chain F; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Probable NADH-ubiquinone oxidoreductase chain
F - Protochlamydia amoebophila (strain UWE25)
Length = 432
Score = 38.3 bits (85), Expect = 0.036
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 240 LTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
L K I +D ++ +K S LRGRGG G TG+KW
Sbjct: 31 LKKAISSISSDQLIEMVKQSWLRGRGGGGFQTGLKW 66
>UniRef50_Q1V283 Cluster: NAD-dependent formate dehydrogenase beta
subunit; n=2; Candidatus Pelagibacter ubique|Rep:
NAD-dependent formate dehydrogenase beta subunit -
Candidatus Pelagibacter ubique HTCC1002
Length = 552
Score = 38.3 bits (85), Expect = 0.036
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 165 DRVFTNLYGRHEWRLKGALARGDWYLT--KEILLKGTDWIVNEMKTSGLRGRGGAGLPTG 338
++ F+ Y + + L+ D + K+ + I + S L GRGGAG PTG
Sbjct: 140 EKFFSKSYASTSFLMDDKLSNLDQFKEQLKKFIATDKQEITKSLLDSNLTGRGGAGFPTG 199
Query: 339 MKW 347
MKW
Sbjct: 200 MKW 202
>UniRef50_O66841 Cluster: NADH-quinone oxidoreductase subunit F;
n=2; Aquifex aeolicus|Rep: NADH-quinone oxidoreductase
subunit F - Aquifex aeolicus
Length = 426
Score = 38.3 bits (85), Expect = 0.036
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 219 LARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
L G + ++ L + I++ + S LRGRGGAG PTG KW
Sbjct: 35 LKDGGYQALEKALNMSPEEIIDWVDKSTLRGRGGAGFPTGKKW 77
>UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreductase;
n=2; Streptomyces|Rep: Putative respiratory chain
oxidoreductase - Streptomyces coelicolor
Length = 646
Score = 37.5 bits (83), Expect = 0.063
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 222 ARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
A G + + G ++ E+ +GL GRGGA PTG KW
Sbjct: 263 AHGGYTALRRAFALGPAAVIREVTDAGLVGRGGAAFPTGRKW 304
>UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit; n=1; Dechloromonas aromatica RCB|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit - Dechloromonas aromatica (strain RCB)
Length = 632
Score = 37.5 bits (83), Expect = 0.063
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 279 VNEMKTSGLRGRGGAGLPTGMKW 347
++E+K + LRGRGGAG TG+KW
Sbjct: 230 LDEIKRANLRGRGGAGFTTGLKW 252
>UniRef50_UPI0000384AE3 Cluster: COG1894: NADH:ubiquinone
oxidoreductase, NADH-binding (51 kD) subunit; n=1;
Magnetospirillum magnetotacticum MS-1|Rep: COG1894:
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD)
subunit - Magnetospirillum magnetotacticum MS-1
Length = 514
Score = 37.1 bits (82), Expect = 0.083
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 270 DWIVNEMKTSGLRGRGGAGLPTGMKW 347
D ++ E++ +GLRG GGAG PT KW
Sbjct: 165 DEVLAELERAGLRGMGGAGFPTARKW 190
>UniRef50_O96948 Cluster: Hydrogenase; n=14; Eukaryota|Rep:
Hydrogenase - Nyctotherus ovalis
Length = 1206
Score = 37.1 bits (82), Expect = 0.083
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 243 TKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
TK+ + G + ++ E+ S L GRGGAG TG KW
Sbjct: 832 TKKAVSMGPEKVIEEVFKSNLVGRGGAGFRTGKKW 866
>UniRef50_Q1VMJ2 Cluster: Formate dehydrogenase, beta subunit; n=1;
Psychroflexus torquis ATCC 700755|Rep: Formate
dehydrogenase, beta subunit - Psychroflexus torquis ATCC
700755
Length = 243
Score = 36.7 bits (81), Expect = 0.11
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 270 DWIVNEMKTSGLRGRGGAGLPTGMKW 347
D ++ +++ S L+G GGAG PTG KW
Sbjct: 212 DSVLTQLENSALKGLGGAGFPTGKKW 237
>UniRef50_A1WBG0 Cluster: NADH dehydrogenase (Quinone) precursor;
n=6; Proteobacteria|Rep: NADH dehydrogenase (Quinone)
precursor - Acidovorax sp. (strain JS42)
Length = 640
Score = 36.7 bits (81), Expect = 0.11
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +3
Query: 237 YLTKEILLKG---TDWIVNEMKTSGLRGRGGAGLPTGMKW 347
Y T L+ G + ++ M+ SGLRG GGAG P G KW
Sbjct: 241 YQTAAALVNGEMDAEAVLAAMEDSGLRGLGGAGFPAGRKW 280
>UniRef50_Q6N1Z2 Cluster: NADH-ubiquinone dehydrogenase chain F;
n=8; Alphaproteobacteria|Rep: NADH-ubiquinone
dehydrogenase chain F - Rhodopseudomonas palustris
Length = 428
Score = 36.3 bits (80), Expect = 0.15
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 276 IVNEMKTSGLRGRGGAGLPTGMKW 347
I+ ++ +GLRGRGGAG PT KW
Sbjct: 43 IIAMVEAAGLRGRGGAGFPTANKW 66
>UniRef50_Q5FP48 Cluster: Outer membrane protein; n=2; Gluconobacter
oxydans|Rep: Outer membrane protein - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 518
Score = 36.3 bits (80), Expect = 0.15
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = -2
Query: 328 KPAPPLPRRPDVFISLTIQSVPFSKISFVKYQSPRARAPFNLHSCRP-YKFVKTRSLSAS 152
+P P LPR PD S+ + + P +++ +Y + AR + + P + T + +AS
Sbjct: 294 RPIPDLPRFPDSLPSIVLANRPDIRVAEAEYAADTARVGIAVSNLYPKFMIPLTFNPNAS 353
Query: 151 GPYLSFEGAWVCW 113
Y +F+ + W
Sbjct: 354 AAYQAFQAGGMAW 366
>UniRef50_A1HDX5 Cluster: NADH dehydrogenase; n=4; Ralstonia
pickettii|Rep: NADH dehydrogenase - Ralstonia pickettii
12J
Length = 525
Score = 35.5 bits (78), Expect = 0.25
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 276 IVNEMKTSGLRGRGGAGLPTGMKW 347
+VN + S LRGRGGA P G+KW
Sbjct: 163 LVNMVAASRLRGRGGAAFPAGIKW 186
>UniRef50_A0RMD3 Cluster: NADH-quinone oxidoreductase chain f; n=1;
Campylobacter fetus subsp. fetus 82-40|Rep: NADH-quinone
oxidoreductase chain f - Campylobacter fetus subsp.
fetus (strain 82-40)
Length = 406
Score = 35.5 bits (78), Expect = 0.25
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 192 RHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
++ +++ A A G + + IL + IV + SGLRG+GG G G KW
Sbjct: 11 KNGYKIDVAKANGAYLNLENILKMDRNSIVEAVDKSGLRGKGGGGGSCGTKW 62
>UniRef50_Q835I8 Cluster: NAD-dependent formate dehydrogenase, beta
subunit, putative; n=1; Enterococcus faecalis|Rep:
NAD-dependent formate dehydrogenase, beta subunit,
putative - Enterococcus faecalis (Streptococcus
faecalis)
Length = 417
Score = 35.1 bits (77), Expect = 0.34
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 276 IVNEMKTSGLRGRGGAGLPTGMKW 347
I+NE+ + LRGRGGA P G KW
Sbjct: 30 ILNELDIAHLRGRGGAAYPLGKKW 53
>UniRef50_Q3ZXP7 Cluster: Hydrogenase subunit HymB; n=7;
Bacteria|Rep: Hydrogenase subunit HymB - Dehalococcoides
sp. (strain CBDB1)
Length = 640
Score = 35.1 bits (77), Expect = 0.34
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 240 LTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
L K + + ++ E+ + LRGRGG G P G KW
Sbjct: 163 LVKTLFHMTPESVLEEVDKANLRGRGGGGFPAGKKW 198
>UniRef50_A0NMW4 Cluster: NADH:ubiquinone oxidoreductase,
NADH-binding (51 kD) subunit; n=2; Proteobacteria|Rep:
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD)
subunit - Stappia aggregata IAM 12614
Length = 626
Score = 35.1 bits (77), Expect = 0.34
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 276 IVNEMKTSGLRGRGGAGLPTGMKW 347
I++ ++ SGLRG GGAG TG KW
Sbjct: 228 IISAIEESGLRGCGGAGFTTGRKW 251
>UniRef50_Q746S7 Cluster: NADH dehydrogenase I, F subunit; n=7;
Deltaproteobacteria|Rep: NADH dehydrogenase I, F subunit
- Geobacter sulfurreducens
Length = 423
Score = 34.7 bits (76), Expect = 0.44
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 297 SGLRGRGGAGLPTGMKW 347
+ LRGRGGAG PTG KW
Sbjct: 48 ANLRGRGGAGFPTGKKW 64
>UniRef50_A7IMB3 Cluster: NADH dehydrogenase; n=3;
Proteobacteria|Rep: NADH dehydrogenase - Xanthobacter
sp. (strain Py2)
Length = 422
Score = 34.7 bits (76), Expect = 0.44
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 270 DWIVNEMKTSGLRGRGGAGLPTGMKW 347
D I+ +K + LRG GGAG PT KW
Sbjct: 45 DAIIETLKDADLRGMGGAGFPTWRKW 70
>UniRef50_Q82NN9 Cluster: Putative uncharacterized protein; n=1;
Streptomyces avermitilis|Rep: Putative uncharacterized
protein - Streptomyces avermitilis
Length = 170
Score = 34.3 bits (75), Expect = 0.59
Identities = 31/112 (27%), Positives = 47/112 (41%)
Frame = +3
Query: 3 SARNMAGALTRVIQGTKPHLGIIGPLAINVNNVPVRFQQTQAPSKDKYGPLADSDRVFTN 182
S +A LT G + L + VP+ Q + P++D PL + RV
Sbjct: 54 SPGELAADLTVACDGRDSSVRRAAGLEPSYFEVPMDVWQVRVPARD---PLKEG-RVSLT 109
Query: 183 LYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTG 338
+ + + L RGD+Y T ++ KGTD + M +SG G A G
Sbjct: 110 V---RDGQFAATLDRGDYYQTSYLIKKGTDGALRPMASSG-SATGSASCSAG 157
>UniRef50_Q603S6 Cluster: NAD-reducing hydrogenase, alpha subunit;
n=9; Proteobacteria|Rep: NAD-reducing hydrogenase, alpha
subunit - Methylococcus capsulatus
Length = 610
Score = 34.3 bits (75), Expect = 0.59
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +3
Query: 204 RLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMKW 347
RL G R L + + L + + E++TS LRGRGGAG T KW
Sbjct: 179 RLLGNPVRPGEALERTLALD-RETMFGEIETSQLRGRGGAGFNTAWKW 225
>UniRef50_Q6LTT0 Cluster: Hypothetical type I
restriction-modification system specificity determinant;
n=1; Photobacterium profundum|Rep: Hypothetical type I
restriction-modification system specificity determinant
- Photobacterium profundum (Photobacterium sp. (strain
SS9))
Length = 437
Score = 33.5 bits (73), Expect = 1.0
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 132 SKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKE 251
S K G L D +TN YG EW +G GD LT+E
Sbjct: 272 SNVKQGKLVIEDAKYTNEYGYKEWTSRGVPFPGDILLTRE 311
>UniRef50_Q5P4U3 Cluster: Formate dehydrogenase, NAD(P) reducing,
beta subunit; n=41; Proteobacteria|Rep: Formate
dehydrogenase, NAD(P) reducing, beta subunit - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 585
Score = 33.1 bits (72), Expect = 1.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 270 DWIVNEMKTSGLRGRGGAGLPTGMKW 347
D +V + +GLRG GGAG P KW
Sbjct: 217 DAVVAALDAAGLRGLGGAGFPAARKW 242
>UniRef50_Q3YL96 Cluster: CdiA; n=3; Escherichia coli|Rep: CdiA -
Escherichia coli
Length = 3132
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +3
Query: 267 TDWIVNEMKTSGLRGRGGAGLPTG 338
T W E KTSGL G GG G TG
Sbjct: 2182 TSWRFKETKTSGLTGTGGIGFTTG 2205
>UniRef50_Q4S2P1 Cluster: Chromosome 17 SCAF14760, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF14760, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 652
Score = 32.3 bits (70), Expect = 2.4
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +3
Query: 48 TKPHLGIIGPLAINVNNVPVRFQQTQAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALAR 227
T+P G I P + + + +APS + P S R G HEWR G +
Sbjct: 136 TRP--GRISPAPPKSQSPVLDLHRQRAPSPGRNHPWQGSHRGPERSPGNHEWRASGRVQP 193
Query: 228 G--DWYLTKEILLKGTDWIVNEMKTSGLRGRGG 320
G D T+ LL T + + +SG+ G G
Sbjct: 194 GDKDRQSTQTQLLDPTGSGASSLSSSGVTGSVG 226
>UniRef50_Q1EUM7 Cluster: Respiratory-chain NADH dehydrogenase
domain, 51 kDa subunit; n=1; Clostridium oremlandii
OhILAs|Rep: Respiratory-chain NADH dehydrogenase domain,
51 kDa subunit - Clostridium oremlandii OhILAs
Length = 388
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 252 ILLKGTDWIVNEMKTSGLRGRGGAGLPTGMK 344
+++K TD + +K +G+ G GGAG PT +K
Sbjct: 70 MMIKATDNYLEAIKEAGVVGAGGAGFPTHIK 100
>UniRef50_Q384F1 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 573
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 129 PSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLR 308
PS++ YG LA S + L GR + AL RG L E++L+ +VN M+ +
Sbjct: 61 PSEEAYGALAPSVFYYAPLGGRFSKEFREALRRGITRLLTELVLR---QLVN-MRQEKIT 116
Query: 309 GRGGAGLPTGMK 344
G +G +G++
Sbjct: 117 GARSSGNTSGIE 128
>UniRef50_Q8C4U5 Cluster: 10 days neonate cerebellum cDNA, RIKEN
full-length enriched library, clone:B930072B04
product:hypothetical protein, full insert sequence; n=1;
Mus musculus|Rep: 10 days neonate cerebellum cDNA, RIKEN
full-length enriched library, clone:B930072B04
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 189
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = -1
Query: 344 LHSCWQTCSSPASKARCFHFINDPVGSFQ*NLLRQIPVPSGESTLQPPFMSTIQVCENPI 165
L CW+T +SPA + + GS + L R PVPSG TL P S V +
Sbjct: 37 LRGCWETETSPALELLPLGHLR---GSGELPLRRLGPVPSGRQTLDSPRASGRDVSSQRL 93
Query: 164 AIGQ 153
G+
Sbjct: 94 REGK 97
>UniRef50_Q44SY7 Cluster: Electron transport complex, RnfABCDGE
type, C subunit; n=5; Chlorobiaceae|Rep: Electron
transport complex, RnfABCDGE type, C subunit -
Chlorobium limicola DSM 245
Length = 441
Score = 31.5 bits (68), Expect = 4.1
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 171 VFTNLYGRHEWRLKGA-LARGDWY-LTKEILLKGTDWIVNEMKTSGLRGRGGAGLPTGMK 344
VF G+ EW L+G DW L+KE +LK + SG+ G GGAG P+G+K
Sbjct: 95 VFITPDGKDEW-LEGLNTPECDWKKLSKEEILK-------RITDSGIVGMGGAGFPSGVK 146
>UniRef50_Q0JCI4 Cluster: Os04g0468100 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os04g0468100 protein -
Oryza sativa subsp. japonica (Rice)
Length = 390
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -2
Query: 340 IPVGKPAPPLPRRPDVFISLTIQ--SVPFSKISFVKYQSPRARAPFNLHSCR 191
I +G PPLPR V +SL+ S P ++ + V+ PR RAP L S R
Sbjct: 4 ISLGPSPPPLPRALPVSLSLSPSPPSAPPARYARVRVSCPR-RAPLPLRSAR 54
>UniRef50_Q2W3V4 Cluster: Molybdopterin-guanine dinucleotide
biosynthesis protein A; n=3; Alphaproteobacteria|Rep:
Molybdopterin-guanine dinucleotide biosynthesis protein
A - Magnetospirillum magneticum (strain AMB-1 / ATCC
700264)
Length = 382
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 27 LTRVIQGTKPHLGIIGPLAINVNNVPVRFQQTQAP 131
L RVI +P +GP+ +N N PVRF T P
Sbjct: 38 LERVIDRLRPQ---VGPMVLNANGDPVRFADTTLP 69
>UniRef50_Q1J1X2 Cluster: Putative uncharacterized protein; n=1;
Deinococcus geothermalis DSM 11300|Rep: Putative
uncharacterized protein - Deinococcus geothermalis
(strain DSM 11300)
Length = 129
Score = 31.1 bits (67), Expect = 5.5
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 66 IIGPLAINVNNVPVRFQQTQAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWY 239
+ P+A+ + ++ R QQ + + KY L DR L G+ E RL G R W+
Sbjct: 75 VYAPIALEIISLVRRNQQAK---RSKYTRLRKRDRALDFLLGQAERRLSGKKTRRRWF 129
>UniRef50_Q0G2D8 Cluster: Putative uncharacterized protein; n=1;
Fulvimarina pelagi HTCC2506|Rep: Putative
uncharacterized protein - Fulvimarina pelagi HTCC2506
Length = 59
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 204 RLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGLPT 335
RL RG W L + ILL G W++ + G +G+ GL T
Sbjct: 14 RLHYTEGRGWWLLIRLILLSGAVWLLIVSRVRGSQGKDRLGLNT 57
>UniRef50_Q01QP7 Cluster: Putative uncharacterized protein; n=3;
Solibacter usitatus Ellin6076|Rep: Putative
uncharacterized protein - Solibacter usitatus (strain
Ellin6076)
Length = 887
Score = 31.1 bits (67), Expect = 5.5
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2
Query: 343 FIPVGKPAPPLPRRPDVFISLTIQSVPFSKISFVKYQSPRARAPFNLHSCR 191
F P PLP F+ T + P + S ++ + PRAR F++ + R
Sbjct: 695 FPPSDSKGAPLPMGRGTFVVRTASANPLALASILRQEIPRARPEFHVRNIR 745
>UniRef50_A7G5W1 Cluster: NADH dehydrogenase family protein; n=4;
Clostridium botulinum A|Rep: NADH dehydrogenase family
protein - Clostridium botulinum (strain Hall / ATCC 3502
/ NCTC 13319 / Type A)
Length = 372
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 210 KGALARGDWYLTKEIL-LKGTDWIVNEMKTSGLRGRGGAGLPTGMK 344
K + + D TKE + +K D +V+ + +G+ G GGAG PT +K
Sbjct: 57 KEIIIKADETQTKEFVKIKKCDNLVDTVFEAGIVGAGGAGFPTHIK 102
>UniRef50_Q18454 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 677
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 340 IPVGKPAPPLPRRPDVFISLTIQSVPFSKIS 248
IP+ P PPLPR P L S+P+++I+
Sbjct: 492 IPMSSPPPPLPRTPQPNNGLPNASLPYNQIN 522
>UniRef50_UPI0000D57748 Cluster: PREDICTED: similar to chromodomain
Y-like protein 2; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to chromodomain Y-like protein 2 -
Tribolium castaneum
Length = 1057
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 337 PVGKPAPPLPRRPDVFISLTIQSVPFSKISFVKYQSPRARAPFNLHSCRPYK 182
PV KP PP P++P L +++ P K V R R F+L S P K
Sbjct: 471 PVLKPKPPSPQKPSPEKKL-VEAEPRLKTEMVIKTYTRKRKSFDLESILPAK 521
>UniRef50_Q9PDL6 Cluster: Soluble lytic murein transglycosylase;
n=18; Xanthomonadaceae|Rep: Soluble lytic murein
transglycosylase - Xylella fastidiosa
Length = 710
Score = 30.7 bits (66), Expect = 7.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 195 HEWRLKGALARGDW 236
HEWR + A+ARGDW
Sbjct: 367 HEWRTREAMARGDW 380
>UniRef50_Q8G5I7 Cluster: Transcription-repair coupling factor; n=4;
Bifidobacterium|Rep: Transcription-repair coupling factor
- Bifidobacterium longum
Length = 1194
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 243 SNTSPLGREHPSTSIHVDHTSL*KPDRYRPAVHTCLLKAP--GSAGSAPV 100
SN +GR P SI + + K +YRP H ++ P GS G P+
Sbjct: 1116 SNRVRIGRIDPPESIQMRMGRIYKGTQYRPVTHQLIVPTPFTGSLGQGPM 1165
>UniRef50_A1SU84 Cluster: Hydrogenase, NADP-reducing subunit C; n=1;
Psychromonas ingrahamii 37|Rep: Hydrogenase,
NADP-reducing subunit C - Psychromonas ingrahamii
(strain 37)
Length = 588
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3
Query: 285 EMKTSGLRGRGGAGLPTGMKW 347
E+ SGLRG GGAG T KW
Sbjct: 203 EIDKSGLRGCGGAGFKTAEKW 223
>UniRef50_A0H3P0 Cluster: Putative uncharacterized protein; n=1;
Chloroflexus aggregans DSM 9485|Rep: Putative
uncharacterized protein - Chloroflexus aggregans DSM
9485
Length = 153
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 73 GLWQLMSTMYRCASSR-PRRLQKTSMDRWPIAIGFSQTCMVDMNG 204
GLWQ + T RC ++ P R++ T+M R+ +A+ T ++ G
Sbjct: 14 GLWQWVGTQRRCVPTQSPLRIRITTMQRFGLALLLMTTIVLTACG 58
>UniRef50_Q9ZWD7 Cluster: F20N2.12; n=1; Arabidopsis thaliana|Rep:
F20N2.12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 679
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 104 RYIVDINCQRPNNAQMWFCALNHSCQCTSHISC 6
+Y DI C+ +A+ WF N C T H+SC
Sbjct: 578 QYWCDI-CEAKLDAEEWFYTCNDYCNVTVHVSC 609
>UniRef50_Q7S2N1 Cluster: Putative uncharacterized protein NCU09357.1;
n=2; Sordariales|Rep: Putative uncharacterized protein
NCU09357.1 - Neurospora crassa
Length = 2313
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +3
Query: 132 SKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRG 311
++ + D + N++ R R K LARG LT+EI+ + + ++ E +
Sbjct: 2071 TQSNWASARDVQSLAKNMFNR-VLRCKEGLARGCIVLTEEIIRQELEAVMTERASRSNAA 2129
Query: 312 RGGAGLPTGM 341
+G PTG+
Sbjct: 2130 AAASGAPTGL 2139
>UniRef50_Q5KED1 Cluster: Osmosensor, putative; n=2; Filobasidiella
neoformans|Rep: Osmosensor, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1875
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -2
Query: 310 PRRPDVFISLTIQSVPFSKISFVKYQSPRARAPFNLHSCRPYKFVKTRSLSASGPYLSFE 131
PRR + + + VPFS+IS Q+P + F++ +C + VK L + G ++ +
Sbjct: 447 PRRCSGSSTKSARGVPFSQISAPNPQTPSDKT-FSMQNCLDVRIVKKDELKSKGIPMAPD 505
Query: 130 G 128
G
Sbjct: 506 G 506
>UniRef50_UPI00006CFBB4 Cluster: Protein kinase domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Protein
kinase domain containing protein - Tetrahymena
thermophila SB210
Length = 1446
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 69 IGPLAINVNNVPVRFQQTQAPS 134
+GP+A+N NN QQ+QAPS
Sbjct: 912 VGPIAVNQNNNNTNSQQSQAPS 933
>UniRef50_Q8KE19 Cluster: Putative uncharacterized protein; n=1;
Chlorobaculum tepidum|Rep: Putative uncharacterized
protein - Chlorobium tepidum
Length = 159
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 63 GIIGPLAINVNNVPVRFQQTQAPSKDKYGPLADSDRVF 176
G IG L IN+ N+ ++Q AP K +GP D F
Sbjct: 80 GNIGILEINLMNLGEHWEQCHAPEKTAWGPSGGEDLGF 117
>UniRef50_Q7U8L8 Cluster: Possible N-terminal part of IF-2; n=1;
Synechococcus sp. WH 8102|Rep: Possible N-terminal part
of IF-2 - Synechococcus sp. (strain WH8102)
Length = 496
Score = 30.3 bits (65), Expect = 9.5
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2
Query: 337 PVGKPAPPLPRRPD 296
PVG+PA P PRRPD
Sbjct: 406 PVGRPAAPAPRRPD 419
>UniRef50_A6DPP5 Cluster: Serine/threonine protein kinase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Serine/threonine
protein kinase - Lentisphaera araneosa HTCC2155
Length = 1100
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +3
Query: 153 LADSDRVFTNLYGRHEWRLKGALARGDWYLTKE 251
+AD+ +FTNL ++++L+ L D+YL K+
Sbjct: 1002 IADNTPIFTNLQKYNDFKLRYCLFSSDYYLVKD 1034
>UniRef50_A4W4W3 Cluster: Filamentous haemagglutinin family outer
membrane protein precursor; n=1; Enterobacter sp.
638|Rep: Filamentous haemagglutinin family outer membrane
protein precursor - Enterobacter sp. 638
Length = 3967
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 267 TDWIVNEMKTSGLRGRGGAGLPTG 338
TDW E K SGL G GG G G
Sbjct: 3062 TDWRFKETKKSGLMGTGGIGFTIG 3085
>UniRef50_Q1JSB2 Cluster: SWI/SNF family transcriptional activator
protein, putative; n=1; Toxoplasma gondii|Rep: SWI/SNF
family transcriptional activator protein, putative -
Toxoplasma gondii
Length = 1383
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +3
Query: 108 RFQQTQAPSKD---KYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDW 275
R QQ + P + YG A S +FT R + L G+W +++LL+ T W
Sbjct: 1203 RQQQCEVPWRRLLIPYGGAAKSRSIFTEQEDRWILNMTTLLGYGNWDKMRDLLLRDTQW 1261
>UniRef50_Q17CQ2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 473
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = -2
Query: 319 PPLPRRPDVFISLTIQSVPFSKISFVKYQSPRARAPFNLH-SCRPYKF-VKTRSLSASGP 146
PPL + P + + + + KY P+A APF + +P +F V + S + +G
Sbjct: 57 PPLQQPPQLVLPEVPPPMVQQFLPEAKYNPPQANAPFTMFGGFQPAQFAVSSNSFNRTGS 116
Query: 145 YLSFEGAWVCWKRTGTLLTL 86
L + G +G +++L
Sbjct: 117 LLGYSGLETPSMFSGDMMSL 136
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,182,556
Number of Sequences: 1657284
Number of extensions: 9198285
Number of successful extensions: 26532
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 25666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26524
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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