Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30062
         (347 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    26   0.096
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    26   0.096
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    25   0.22 
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    25   0.22 
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    22   1.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   2.1  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   2.7  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   4.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   4.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   4.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   6.3  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    20   8.3  

>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 26.2 bits (55), Expect = 0.096
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 337 PVGKPAPPLPRRPDVFISLTIQSVPFSKISFVKYQSPRAR 218
           P G+P P +PR P  ++S+T    PF ++       PR R
Sbjct: 122 PGGQPIPDIPRYP--WMSITDWMSPFDRVVCGPNGCPRRR 159


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 26.2 bits (55), Expect = 0.096
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 337 PVGKPAPPLPRRPDVFISLTIQSVPFSKISFVKYQSPRAR 218
           P G+P P +PR P  ++S+T    PF ++       PR R
Sbjct: 181 PGGQPIPDIPRYP--WMSITDWMSPFDRVVCGPNGCPRRR 218


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 25.0 bits (52), Expect = 0.22
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 337 PVGKPAPPLPRRPDVFISLTIQSVPFSKI 251
           P G+P P +PR P  ++S+T    PF ++
Sbjct: 122 PGGQPIPDIPRYP--WMSITDWMSPFDRV 148


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 25.0 bits (52), Expect = 0.22
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 337 PVGKPAPPLPRRPDVFISLTIQSVPFSKI 251
           P G+P P +PR P  ++S+T    PF ++
Sbjct: 181 PGGQPIPDIPRYP--WMSITDWMSPFDRV 207


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 15  MAGALTRVIQGTKPHL 62
           M GA++  IQG+KP++
Sbjct: 71  MQGAISNHIQGSKPNI 86


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 131 RRLGLLEAHRYIVDINCQRPNNAQMWFCALNHS 33
           + L L E +++I+D+      N Q W  ++ HS
Sbjct: 159 KMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHS 191


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 94  TMYRCASSRPRRLQKTSMDRW 156
           TM RC  SRP R    ++ R+
Sbjct: 253 TMIRCLKSRPARQIALTVPRY 273


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 239 IPVPSGESTLQPPFMSTIQVCE 174
           IP P+G+S L PP   +++  E
Sbjct: 358 IPTPNGDSRL-PPLEISLKTLE 378


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 239 IPVPSGESTLQPPFMSTIQVCE 174
           IP P+G+S L PP   +++  E
Sbjct: 358 IPTPNGDSRL-PPLEISLKTLE 378


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 66  IIGPLAINVNNVPVRFQQTQAPSKDKYG 149
           + G   +NV+++P+ F+     S  +YG
Sbjct: 570 LFGGFFLNVSSIPIYFKWLSFLSWFRYG 597


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 66  IIGPLAINVNNVPVRFQQTQAPSKDKYG 149
           + G   +NV+++P+ F+     S  +YG
Sbjct: 570 LFGGFFLNVSSIPIYFKWLSFLSWFRYG 597


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 236 PVPSGESTLQPPFMSTIQVC 177
           P  +GE T QP  ++  ++C
Sbjct: 891 PGEAGEYTKQPGMLAYYEIC 910



 Score = 20.2 bits (40), Expect = 6.3
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +3

Query: 144  YGPLADSDRVFTNLYGRHEWRLKGA 218
            Y    D+D  F   +  H W  KGA
Sbjct: 2032 YAHPEDADATFNTNFTIHYWIEKGA 2056



 Score = 20.2 bits (40), Expect = 6.3
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 227  SGESTLQPPFMSTIQVCENPIAIGQRSI 144
            +GE T    F++  ++C N I  G + +
Sbjct: 2092 AGEETRARGFLAYYEICTNVIKKGWKVV 2119


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 258 VKSPSSNTSPLGREHPSTSIH 196
           + +PS + SPL  +H   S +
Sbjct: 265 ITTPSPSASPLAYQHEYNSFN 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,358
Number of Sequences: 336
Number of extensions: 2163
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)