Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30058
(519 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 29 0.42
SPCC622.14 |||GTPase activating protein |Schizosaccharomyces pom... 27 1.7
SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr 1||... 27 2.2
SPCC18.17c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 26 3.9
SPBC409.10 |ade7||phosphoribosylamidoimidazolesuccinocarboxamide... 25 5.1
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 25 5.1
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 25 5.1
SPAC1F7.09c |||allantoicase |Schizosaccharomyces pombe|chr 1|||M... 25 6.8
SPBC1709.03 |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.8
SPAC3C7.09 |set8||lysine methyltransferase Set8 |Schizosaccharom... 25 6.8
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 29.1 bits (62), Expect = 0.42
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 20 YVTYGLITRELDGVDSSY-RSAMSVQSSLAMGSIYMYGTEDQKQKYLP 160
+V + +T + G + Y +A SV S L + ++Y Y E++ K+LP
Sbjct: 535 FVPFAFVTFSITGGNRLYIYAASSVFSILCITALYYYTDEEKPPKFLP 582
>SPCC622.14 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 213 KLGSVNPKQPINSPVAMRGKYFCFWSS 133
KLGS+N ++P + P + G+Y F SS
Sbjct: 157 KLGSINSQRPDDLPPSQGGRYQGFGSS 183
>SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 224
Score = 26.6 bits (56), Expect = 2.2
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 10 WSFLRYVWSHYKRTRW 57
WSF+ WS++K +W
Sbjct: 33 WSFMANTWSNFKHIKW 48
>SPCC18.17c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 488
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 116 IYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLV 238
I YG ED+ +Y+PR T F + EP S A L+
Sbjct: 328 IKKYGIEDEANRYVPRWLTRR----FLMDEPGMSSFAHALL 364
>SPBC409.10 |ade7||phosphoribosylamidoimidazolesuccinocarboxamide
synthase Ade7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 299
Score = 25.4 bits (53), Expect = 5.1
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 371 IVERAEVKKGLDTPKINGKFSLRASTTGMILLDEVVIPEEN 493
I +KKG+ +F + +T ++L+DEV+ P+ +
Sbjct: 194 IARDVALKKGIIIADTKFEFGVDETTNKIVLVDEVLTPDSS 234
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 5.1
Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 206 VPLTQNNQLIHL*PCVV-SISVSGLQFRTYKSNPLPNYSAHSSLIYKRSQRHLV 48
+P T++N+ C++ ++ G + R +P P+ ++ IYK + HL+
Sbjct: 123 LPYTRHNEGGDWIQCIIIKVTGEGAKQRFEVQDPEPDDDGNAGQIYKTTANHLI 176
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 25.4 bits (53), Expect = 5.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 512 PLHSAINSPPV*PLRRAISFRLSMPAKKIS 423
PLH + PP PLR+ + R S P + ++
Sbjct: 298 PLHVSPRKPPKPPLRKVSTQRSSSPIENLA 327
>SPAC1F7.09c |||allantoicase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 342
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 388 GKERFRYAQNQWEIFFAGIDNRNDIARRSGYTGGEFIAECS 510
G RFR N +F A +D R D+A Y GG + +CS
Sbjct: 170 GIARFRLYGNVVPVFPADLDARLDLAHM--YLGG-LVVQCS 207
>SPBC1709.03 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 398
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 218 SDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKDDAGK 358
+D G +K+ + CYV S + ++NA + I WA + K
Sbjct: 301 NDCSGHGRCSKYGQLDSCYVCQCSNSVVSNAAGQNKTIRWAGESCSK 347
>SPAC3C7.09 |set8||lysine methyltransferase Set8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 429
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 413 KINGKFSLRASTTGMILLDEVVIPEENLL 499
K NG FSL T+G +LL+ +P EN++
Sbjct: 27 KGNGIFSLNRYTSGTVLLE---VPLENII 52
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,232,171
Number of Sequences: 5004
Number of extensions: 45883
Number of successful extensions: 103
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 210309424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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