Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30058
(519 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 2e-22
SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 7e-19
SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 9e-15
SB_29968| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_15646| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=8.3e-27) 71 4e-13
SB_6242| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11
SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 7e-11
SB_55185| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=4.5e-16) 62 2e-10
SB_47347| Best HMM Match : Acyl-CoA_dh_1 (HMM E-Value=1e-17) 50 2e-06
SB_35341| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=2.9e-14) 49 3e-06
SB_7379| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_10343| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=0.00044) 42 3e-04
SB_50052| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_23072| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_21492| Best HMM Match : Ion_trans (HMM E-Value=1.3e-05) 27 9.3
SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_17059| Best HMM Match : 7tm_1 (HMM E-Value=2.9e-34) 27 9.3
>SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 102 bits (245), Expect = 2e-22
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 5/174 (2%)
Frame = +2
Query: 2 GCAGVSYVTYGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGEL 181
G G Y+ + ++ E+ V S + S+L + I G ++QK+KYLP++ +GE
Sbjct: 98 GGIGSGYMEHIIVLEEMSRVSGSIALSYGAHSNLCINQIARNGNKEQKRKYLPKLLSGEH 157
Query: 182 IGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAK-DDAGK 358
IG ++E N GSD + RA D + YVL+G K WITN P AD++IV+AK + + K
Sbjct: 158 IGALAMSEANAGSDVVSMKLRADKDGDH--YVLNGHKMWITNGPDADVLIVYAKTNPSSK 215
Query: 359 VRGFIVERAEVKKGL----DTPKINGKFSLRASTTGMILLDEVVIPEENLLPNV 508
+ V+KG+ +PK++ K +R S T ++ D IP EN++ V
Sbjct: 216 KPEHAITTFLVEKGMPGFSTSPKLD-KLGMRGSNTCELVFDNCRIPAENVMGEV 268
>SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 90.6 bits (215), Expect = 7e-19
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Frame = +2
Query: 2 GCAGVSYVTYGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGEL 181
G G+ + ++T EL S ++A+ +SLA + + G E+QK+KYL RM +
Sbjct: 175 GGIGLGVLDGCVVTEELSYACSGIQTAIEA-NSLAEMPVILAGNEEQKKKYLGRMIKEPI 233
Query: 182 IGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKDD---- 349
+ + +TEP GSD G+ TRA + K YV++G K WITN +A+ V A+ D
Sbjct: 234 MAAYCVTEPTAGSDVAGIKTRA--EKKGDEYVINGQKMWITNGGVANWYFVLARTDSSAS 291
Query: 350 AGK-VRGFIVERAEVKKGLDTPKINGKFSLRASTTGMILLDEVVIPEENLL 499
AGK GFIV+ A+ G+ + RAS T I ++VV+P+EN+L
Sbjct: 292 AGKGFTGFIVD-ADT-PGVTPGRKEQNMGQRASDTRGITFEDVVVPKENVL 340
>SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 77.0 bits (181), Expect = 9e-15
Identities = 45/129 (34%), Positives = 71/129 (55%)
Frame = +2
Query: 113 SIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVLSGSK 292
S+ YGT+ QK++++ G+ +GCF L+EP+ GSDAG T A D + YVL+G+K
Sbjct: 124 SVNNYGTDAQKEEWIKPFLNGDRVGCFALSEPDNGSDAGAAKTTAVLDGDH--YVLNGTK 181
Query: 293 TWITNAPIADIIIVWAKDDAGKVRGFIVERAEVKKGLDTPKINGKFSLRASTTGMILLDE 472
WITN + + A + F+V + GL K +RA++T ++ ++
Sbjct: 182 AWITNG--------YESEAAVGISAFLVPKP--TPGLTLGNKEDKLGIRATSTCYLVFED 231
Query: 473 VVIPEENLL 499
IP+ENLL
Sbjct: 232 CRIPKENLL 240
>SB_29968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 76.6 bits (180), Expect = 1e-14
Identities = 45/108 (41%), Positives = 64/108 (59%)
Frame = +2
Query: 17 SYVTYGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFG 196
++ L+ EL VD S VQ++L I YGT++QKQ+YLP++A ++G F
Sbjct: 102 TFFAANLVIEELAKVDPSVSVMCDVQNTLINNLIMTYGTKEQKQEYLPQLAQ-HMVGGFC 160
Query: 197 LTEPNFGSDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWA 340
L+E + GSDA L T A K+ +VL+GSK WITNA A + +V A
Sbjct: 161 LSEESSGSDAFALKTVALE--KDGHFVLNGSKMWITNAEYAGVFLVMA 206
>SB_15646| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=8.3e-27)
Length = 257
Score = 71.3 bits (167), Expect = 4e-13
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Frame = +2
Query: 179 LIGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWA--KDDA 352
++GC G++E GSD GL T AK D + YV++GSK WITN+P AD I + A DD
Sbjct: 1 MVGCIGVSEVGAGSDVAGLKTTAKKDGDD--YVINGSKMWITNSPSADFICLLANTSDDK 58
Query: 353 GKVRGFIVERAEVKKGLDTPKINGKFSLRASTTGMILLDEVVIPEEN 493
V ++ G+ K +R+S T + D V +P+ N
Sbjct: 59 PHVNKSLIMVPMNTPGITLSTHLDKLGMRSSETAQVFFDNVRVPQRN 105
>SB_6242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 66.5 bits (155), Expect = 1e-11
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Frame = +2
Query: 59 VDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLV 238
VD++ + M+VQ +L G++ GTE K L + + + +GCFGLTE +G++A +
Sbjct: 150 VDAAMATKMTVQFNLFGGTVLKLGTERHHSKLLKGIDSLQEVGCFGLTELGYGNNAVQME 209
Query: 239 TRAKHDAKNKCYVLS-----GSKTWITN-APIADIIIVWAK---DDAGK-VRGFIV---- 376
T A +D + K +V++ K WITN A A I+V+A+ D + + G +V
Sbjct: 210 TTAVYDKETKEFVVNTPSPLAQKYWITNGACHAHHIVVFAQTYVDGVNQGIHGVLVPIRD 269
Query: 377 ERAEVKKGLDTPKINGKFSLRASTTGMILLDEVVIPEENLL 499
VK G+ + K L D V +P ENLL
Sbjct: 270 HDLHVKPGVRIDDMGHKMGLNGVDNAKFYFDNVHVPRENLL 310
>SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 64.1 bits (149), Expect = 7e-11
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +2
Query: 2 GCAGVSYVTYGLITRELDGVD-SSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGE 178
G G+ Y + EL + A+ VQ+ +A ++ +G+E+ KQ++L G+
Sbjct: 314 GGMGLDYSFSVAMAEELGSIKCGGVPMAIGVQADMATPALVRFGSEELKQQFLVPTIAGD 373
Query: 179 LIGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKDDAG 355
+ C G++E GSD + T A D + YV++G K W TN AD + + A D G
Sbjct: 374 FVTCLGVSETGAGSDVASIKTTAVKDGDD--YVINGGKMWTTNGIQADWMCLLANTDKG 430
>SB_55185| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=4.5e-16)
Length = 647
Score = 62.5 bits (145), Expect = 2e-10
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Frame = +2
Query: 59 VDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLV 238
VD S + M+VQ +L G++ GTE K L + + E +GCFGLTE +G++A +
Sbjct: 129 VDGSMATKMTVQFNLFGGTVLKLGTERHHSKLLKGIDSLEDVGCFGLTELGYGNNAVQME 188
Query: 239 TRAKHDAKNKCYVLS-----GSKTWITN-APIADIIIVWAKDDA-GK---VRGFIV---- 376
T A +D + + ++++ K WITN A A I+V+A+ GK + G +V
Sbjct: 189 TTATYDNETQEFIVNTPSTLAQKYWITNGACDAHHIVVFAQLYVNGKNEGIHGVLVPIRD 248
Query: 377 ERAEVKKGLDTPKINGKFSLRASTTGMILLDEVVIPEENLL 499
+ + G + K L + D V +P ENLL
Sbjct: 249 KNLKEMPGSSIHDMGPKMGLNGVDNAKFIFDNVRVPRENLL 289
>SB_47347| Best HMM Match : Acyl-CoA_dh_1 (HMM E-Value=1e-17)
Length = 551
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Frame = +2
Query: 11 GVSYVTYGLITRELDGV-DSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGELIG 187
G++ V Y I E+ SS S + M + YG++ QK+K+L + G +
Sbjct: 282 GLTNVEYAFICEEMGRCFPSSEVFNCSPPDTGNMEVLIRYGSDAQKEKWLEPLLDGRIRS 341
Query: 188 CFGLTEPNF-GSDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWA 340
CF +TEP SDA + + + D + YVL+G K WI+ + + + WA
Sbjct: 342 CFAMTEPQVASSDAANIESSIRVDGDH--YVLNGRKWWISGVYLF-LALQWA 390
>SB_35341| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=2.9e-14)
Length = 490
Score = 48.8 bits (111), Expect = 3e-06
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Frame = +2
Query: 107 MGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYV--- 277
M +I + GT++Q++K+LP +++G F TE G+ GL T A +D + + +V
Sbjct: 143 MPTIKLMGTKEQQEKWLPLAEMHQILGTFAQTELGHGTFVRGLETTATYDKQTQQFVLHS 202
Query: 278 --LSGSKTWITN-APIADIIIVWAK----DDAGKVRGFIVERAEVK-----KGLDTPKIN 421
L+ SK W N + IV A+ D + F+++ ++K G+ +I
Sbjct: 203 PSLTASKWWPGNLGHSTNYCIVVARLIIDDKEYGLHYFLLQTRDLKTHQPLPGVTIGEIG 262
Query: 422 GKFS--LRASTTGMILLDEVVIPEENLL 499
K S + G +LLD V +P E +L
Sbjct: 263 PKTSRYYNVNDNGFLLLDHVRVPREQML 290
>SB_7379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 44.0 bits (99), Expect = 8e-05
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +2
Query: 107 MGSIYMYGTEDQKQKYLPRMATGELIGCFGLTEPNF-GSDAGGLVTRAKHDAKNKCYVLS 283
M +++YG+ +QK+K+L + GE+ F +TEP SDA + + + YV++
Sbjct: 131 MEVLHLYGSPEQKKKWLDPLLNGEMRSAFCMTEPGVASSDATNMECKITRHGDH--YVIN 188
Query: 284 GSKTWITNA--PIADIIIV 334
G K W + A P I+IV
Sbjct: 189 GRKWWSSGAGDPRCKILIV 207
>SB_10343| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=0.00044)
Length = 156
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +2
Query: 53 DGVDSSYRSAMSVQSSLAMGS---IYMYGTEDQKQKYLPRMATGELIGCFGLTEPNF-GS 220
DG + S R + S G+ +++YG+ +QK+K+L + G++ F +TEP S
Sbjct: 70 DGEEPSIRQFQMLDVSSDSGNMEVLHLYGSPEQKKKWLDPLLNGDIRSAFCMTEPGVASS 129
Query: 221 DAGGLVTRAKHDAKNKCYVLSGSKTW 298
DA + + + YV++G K W
Sbjct: 130 DATNMECKITRHGDH--YVINGRKWW 153
>SB_50052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 31.5 bits (68), Expect = 0.43
Identities = 42/166 (25%), Positives = 63/166 (37%)
Frame = +2
Query: 2 GCAGVSYVTYGLITRELDGVDSSYRSAMSVQSSLAMGSIYMYGTEDQKQKYLPRMATGEL 181
G G++ Y + + D + + S+ I ++G ++ATG+
Sbjct: 77 GGVGLTNTQYARMVEIVGAHDLAVGIVLGAHQSIGFKGILLFGN---------KVATGKK 127
Query: 182 IGCFGLTEPNFGSDAGGLVTRAKHDAKNKCYVLSGSKTWITNAPIADIIIVWAKDDAGKV 361
F LTEP+ GSDA PI D KD KV
Sbjct: 128 YAAFCLTEPSSGSDAA--------------------------TPIKDPKTGEVKD---KV 158
Query: 362 RGFIVERAEVKKGLDTPKINGKFSLRASTTGMILLDEVVIPEENLL 499
FIVER G+++ K ++AS T + D V +P EN+L
Sbjct: 159 TAFIVERG--FGGVESGPPEKKMGIKASNTAEVYFDNVPVPVENVL 202
>SB_23072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 152 ISVSGLQFRTYKSNPLPNYSAHSSLIYKRSQRHLVLL 42
++ SGLQ + Y S+LI+KR Q LVL+
Sbjct: 107 VAESGLQLQFYMQFQFYTIKITSTLIFKRVQARLVLI 143
>SB_21492| Best HMM Match : Ion_trans (HMM E-Value=1.3e-05)
Length = 1130
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -1
Query: 336 QTIIMSAIGALVIQVFDPDKT*HLFFASCFALVTNPPASLPKLGS 202
++II++ I AL+I V+ LF F + T+PP +LP + S
Sbjct: 879 RSIILTGILALII-VYMFSIVGFLFLKDDFLIETDPPPALPSIAS 922
>SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1548
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 401 LDTPKINGKFSLRASTTGMILLDEVVIPEENLLPN 505
L P + + S STTG IL ++ PEE + N
Sbjct: 1192 LQEPSDDLRISTEGSTTGYILNGNIISPEEGSIHN 1226
>SB_17059| Best HMM Match : 7tm_1 (HMM E-Value=2.9e-34)
Length = 333
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 201 VNPKQPINSPVAMRGKYFCFWSSVPYI 121
VN Q +N+ + +R KY C W+ V +I
Sbjct: 240 VNCLQLLNTDLCIRHKYQCIWAWVSFI 266
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,406,435
Number of Sequences: 59808
Number of extensions: 343291
Number of successful extensions: 731
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1160542895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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