Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30058
         (519 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   1.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   1.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.7  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 481 YNHFVEQYHSGCRCPQRKFPIDFGRI 404
           ++  +E YH G +   +  P DFG +
Sbjct: 65  FDPIIEDYHGGFKKTDKHPPKDFGDV 90


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 481 YNHFVEQYHSGCRCPQRKFPIDFGRI 404
           ++  +E YH G +   +  P DFG +
Sbjct: 81  FDPIIEDYHGGFKKTDKHPPKDFGDV 106


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 89   HSSLIYKRSQRHLV 48
            HS+L YK  +RHL+
Sbjct: 1073 HSTLEYKVKERHLM 1086


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,247
Number of Sequences: 438
Number of extensions: 3422
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)