Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30056
         (665 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever...    30   3.3  
AY128424-1|AAM75017.1| 1150|Drosophila melanogaster GH14795p pro...    29   7.5  
AE014298-2789|AAF48904.1| 1150|Drosophila melanogaster CG7358-PA...    29   7.5  

>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
           transcriptase protein.
          Length = 1084

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 216 DVGGVEVWYFKLEHRYLVLRGDLPSARDTFRVRGQVV 106
           D  G+ V   K  H    L+ DLP++  T +++GQV+
Sbjct: 755 DKWGISVNAAKTGHVIFTLKNDLPTSLRTMKIKGQVI 791


>AY128424-1|AAM75017.1| 1150|Drosophila melanogaster GH14795p
           protein.
          Length = 1150

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 111 PGRELEMYPGQRADPLAVRDTGVPV*NTILQRHLHRP 221
           P + L    G+    L  RD G+P  +T L++H H P
Sbjct: 726 PHKRLPYGSGRDGAALGARDGGLPGSSTFLKKHTHAP 762


>AE014298-2789|AAF48904.1| 1150|Drosophila melanogaster CG7358-PA
           protein.
          Length = 1150

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 111 PGRELEMYPGQRADPLAVRDTGVPV*NTILQRHLHRP 221
           P + L    G+    L  RD G+P  +T L++H H P
Sbjct: 726 PHKRLPYGSGRDGAALGARDGGLPGSSTFLKKHTHAP 762


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,342,163
Number of Sequences: 53049
Number of extensions: 686904
Number of successful extensions: 2491
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2491
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)