BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30055 (565 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL117195-22|CAB55034.1| 119|Caenorhabditis elegans Hypothetical... 79 2e-15 AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 32 0.33 AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 32 0.33 AC084160-4|AAK39374.1| 240|Caenorhabditis elegans Hypothetical ... 30 1.0 U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 30 1.3 AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ... 30 1.3 AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical... 30 1.3 AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 3.1 AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 3.1 AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 29 3.1 Z99281-23|CAE18026.1| 302|Caenorhabditis elegans Hypothetical p... 28 4.0 U39998-4|AAN60511.1| 351|Caenorhabditis elegans Hypothetical pr... 28 4.0 U39998-3|AAO38584.1| 460|Caenorhabditis elegans Hypothetical pr... 28 4.0 U39998-2|AAL00881.1| 484|Caenorhabditis elegans Hypothetical pr... 28 4.0 U39998-1|AAO38583.1| 475|Caenorhabditis elegans Hypothetical pr... 28 4.0 AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ... 28 4.0 Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical pr... 27 9.3 >AL117195-22|CAB55034.1| 119|Caenorhabditis elegans Hypothetical protein Y57A10A.29 protein. Length = 119 Score = 79.0 bits (186), Expect = 2e-15 Identities = 34/83 (40%), Positives = 57/83 (68%), Gaps = 1/83 (1%) Frame = +2 Query: 257 QPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDWDIFY 436 + ++ ++ARL YQS+KRG+LEND+LL FA++ L +E + YD+LIN +WD+FY Sbjct: 27 EKIDAKRARLLYQSKKRGILENDILLGDFAEQNLKKMSEPELKAYDKLINGEHMEWDLFY 86 Query: 437 WIVEKKPTPEEFDN-EIMDLLKK 502 ++ KK PE+ ++ ++ +KK Sbjct: 87 YLSNKKSPPEDVESCQVYQKVKK 109 >AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like receptor TOL-1 protein. Length = 1221 Score = 31.9 bits (69), Expect = 0.33 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = +2 Query: 140 LNLAYNALKNVKKVAFSSDTTNNMDTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLE 319 LN++ N ++ FSS +D +Y ++ VE Q EKR A LH + L Sbjct: 287 LNVSRNEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQLT 346 Query: 320 NDLL 331 +L Sbjct: 347 GGVL 350 >AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosophila) family protein 1 protein. Length = 1221 Score = 31.9 bits (69), Expect = 0.33 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = +2 Query: 140 LNLAYNALKNVKKVAFSSDTTNNMDTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLE 319 LN++ N ++ FSS +D +Y ++ VE Q EKR A LH + L Sbjct: 287 LNVSRNEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQLT 346 Query: 320 NDLL 331 +L Sbjct: 347 GGVL 350 >AC084160-4|AAK39374.1| 240|Caenorhabditis elegans Hypothetical protein Y73B3B.2 protein. Length = 240 Score = 30.3 bits (65), Expect = 1.0 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +2 Query: 443 VEKKPTPEEFDNEIMDLLKKHAKNEDKIALRQPRST 550 + KP+ +FD+E M+LLK N+ KI PR T Sbjct: 193 INPKPSQPQFDDEQMNLLKS-IINQSKIVSMMPRDT 227 >U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily assigned gene nameprotein 59 protein. Length = 1592 Score = 29.9 bits (64), Expect = 1.3 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Frame = +2 Query: 254 QQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLINSPSNDW--- 424 Q E ++ HY+ R + ML++++ + L EK + L N+ Sbjct: 690 QSEQEMKQLEAHYE-RAQKMLQDNVEQMNVENRGLRDEIEKLSQQMAALPRGGLNEQQLH 748 Query: 425 DIFYWIVEKKPTPEEFDN 478 +IF W+ E+K T EE +N Sbjct: 749 EIFNWVSEEKATREEMEN 766 >AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical protein Y57A10A.1 protein. Length = 1342 Score = 29.9 bits (64), Expect = 1.3 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +2 Query: 443 VEKKPTPEEFDNEIMDLLKKHAKNEDKIALRQPRST 550 + KP+ +FD+E M+LLK N+ KI PR T Sbjct: 29 INPKPSQPQFDDEQMNLLKS-IINQSKIVPMMPRDT 63 >AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical protein Y57A10A.1 protein. Length = 1342 Score = 29.9 bits (64), Expect = 1.3 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +2 Query: 443 VEKKPTPEEFDNEIMDLLKKHAKNEDKIALRQPRST 550 + KP+ +FD+E M+LLK N+ KI PR T Sbjct: 29 INPKPSQPQFDDEQMNLLKS-IINQSKIVPMMPRDT 63 >AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C beta homolog EGL-8 protein. Length = 1431 Score = 28.7 bits (61), Expect = 3.1 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 464 EEFDNEIMDLLKKHAKNEDKIALRQP 541 + F E+ DL KKH K D I +QP Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQP 1167 >AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying defective protein 8,isoform b protein. Length = 1431 Score = 28.7 bits (61), Expect = 3.1 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 464 EEFDNEIMDLLKKHAKNEDKIALRQP 541 + F E+ DL KKH K D I +QP Sbjct: 1142 KRFQKELDDLRKKHQKQRDSIQKQQP 1167 >AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical protein R10F2.1 protein. Length = 2779 Score = 28.7 bits (61), Expect = 3.1 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +2 Query: 161 LKNVKKVAFSSDTTNNMDTTYMEIPLYDVEKQQP 262 ++ + VA+SS T + T Y+EI +DV+ P Sbjct: 2511 IEQITVVAYSSPTKQSKTTVYLEIGPFDVQPSLP 2544 >Z99281-23|CAE18026.1| 302|Caenorhabditis elegans Hypothetical protein Y57G11C.43 protein. Length = 302 Score = 28.3 bits (60), Expect = 4.0 Identities = 11/37 (29%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +2 Query: 434 YWIVEKKPTPEEFDNEIMD-LLKKHAKNEDKIALRQP 541 +W+ E+KP E + EI+D L+ ++ + + K+ +P Sbjct: 114 HWLNEQKPEVERYPKEIIDQLMMRYERPDTKLRWEKP 150 >U39998-4|AAN60511.1| 351|Caenorhabditis elegans Hypothetical protein ZK622.3c protein. Length = 351 Score = 28.3 bits (60), Expect = 4.0 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Frame = +2 Query: 413 SNDWDIFYWIVEKKPTPEEFD----NEIMDLLKKHAKNEDK 523 SN+W +W+ EK P + NE+++L+K +NE + Sbjct: 110 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 150 >U39998-3|AAO38584.1| 460|Caenorhabditis elegans Hypothetical protein ZK622.3d protein. Length = 460 Score = 28.3 bits (60), Expect = 4.0 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Frame = +2 Query: 413 SNDWDIFYWIVEKKPTPEEFD----NEIMDLLKKHAKNEDK 523 SN+W +W+ EK P + NE+++L+K +NE + Sbjct: 219 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 259 >U39998-2|AAL00881.1| 484|Caenorhabditis elegans Hypothetical protein ZK622.3b protein. Length = 484 Score = 28.3 bits (60), Expect = 4.0 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Frame = +2 Query: 413 SNDWDIFYWIVEKKPTPEEFD----NEIMDLLKKHAKNEDK 523 SN+W +W+ EK P + NE+++L+K +NE + Sbjct: 243 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 283 >U39998-1|AAO38583.1| 475|Caenorhabditis elegans Hypothetical protein ZK622.3a protein. Length = 475 Score = 28.3 bits (60), Expect = 4.0 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Frame = +2 Query: 413 SNDWDIFYWIVEKKPTPEEFD----NEIMDLLKKHAKNEDK 523 SN+W +W+ EK P + NE+++L+K +NE + Sbjct: 234 SNNWRQVHWLAEKVPAEDGAKGTSFNELVELIKNTWQNEQE 274 >AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical protein Y87G2A.5 protein. Length = 1050 Score = 28.3 bits (60), Expect = 4.0 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +2 Query: 299 RKRGMLENDLLLSTFAKKYLNGFNEKQTMMYDRLIN-SPSNDWDIFYWIVEKK 454 R+RG+ +DL F ++ + NEK ++YD+ S DWD + ++ K Sbjct: 181 RERGLTRHDLGRDRFNQEVWHWKNEKGDVIYDQFRKLGASVDWDRAVFTMDPK 233 >Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical protein T04A8.2 protein. Length = 335 Score = 27.1 bits (57), Expect = 9.3 Identities = 16/55 (29%), Positives = 25/55 (45%) Frame = -1 Query: 511 FSMFFEKVHNFIVKFFRSWLLFNYPIEYVPIVAG*VYETIVHHSLFFIKTIQILL 347 FSM F + + +F P+ Y P++ + ++HHS IQILL Sbjct: 78 FSMIFLDIIGRTLVYFTPLCPIIAPMFYEPLIGFKIMMIVLHHSRACKSLIQILL 132 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,671,699 Number of Sequences: 27780 Number of extensions: 263207 Number of successful extensions: 905 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 875 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 905 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1166125180 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -