BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30054 (626 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102,814... 191 4e-49 04_04_1075 + 30634141-30634320,30634917-30635014,30635113-306351... 187 5e-48 08_02_1442 + 27120604-27120890,27121029-27121166,27121280-271213... 112 3e-25 10_06_0101 + 10736987-10737100,10737263-10737301,10737397-107374... 29 2.3 08_02_0077 - 11979497-11979654,11980012-11982178 29 3.0 03_06_0596 + 34964109-34964189,34964286-34964481,34964567-349647... 29 3.0 07_03_0123 - 13688562-13689146,13689233-13689583,13689665-136898... 29 4.0 12_02_0398 - 18586985-18587480,18587669-18587687,18588317-185885... 28 5.3 01_06_0457 - 29524544-29525962,29526518-29526606,29526841-295268... 28 7.0 03_02_0651 + 10183050-10184167,10184350-10184974,10185023-101852... 27 9.2 >08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102, 8148192-8148271,8148770-8148872,8148966-8149181 Length = 245 Score = 191 bits (465), Expect = 4e-49 Identities = 89/170 (52%), Positives = 122/170 (71%) Frame = +3 Query: 114 KLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEI 293 K VPESVLK + L + A++ ++ IF RA+QY +EY +E++ + Sbjct: 7 KAAVVPESVLKKRKREEQWAADRKEKALAEKKKAVESRKLIFARAKQYAQEYDAQEKELV 66 Query: 294 RPARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKAT 473 + R+AR +G +YV EAKL FV+RIRGIN + PK RK+LQL RLRQI NGVF+++NKAT Sbjct: 67 QLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKAT 126 Query: 474 VNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKKL 623 +NMLR EPY+A+GYPNLKSVREL+YKRG+ KL+ QRIP+ +N ++E+ L Sbjct: 127 INMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLQNNKVIEEGL 176 >04_04_1075 + 30634141-30634320,30634917-30635014,30635113-30635170, 30635259-30635338,30635686-30635788,30635847-30636080 Length = 250 Score = 187 bits (456), Expect = 5e-48 Identities = 85/164 (51%), Positives = 120/164 (73%) Frame = +3 Query: 126 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRPAR 305 VPESVL+ + + + +I+ ++ IF RA+QY +EY +E++ ++ R Sbjct: 10 VPESVLRKRKREEVWAAASKEKAVAEKKKSIESRKLIFSRAKQYAEEYEAQEKELVQLKR 69 Query: 306 QARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNML 485 +AR +G +YV E KL FV+RIRGIN + PK RK+LQL RLRQI NGVF+++NKAT+NML Sbjct: 70 EARMKGGFYVSPEEKLLFVVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATINML 129 Query: 486 RIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEK 617 R EPY+A+GYPNLKSVREL+YKRG+ KL+ QRIP+T+N ++E+ Sbjct: 130 RRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEE 173 >08_02_1442 + 27120604-27120890,27121029-27121166,27121280-27121382, 27121877-27122036,27122927-27123114,27123203-27124770, 27124882-27125869,27126595-27127098,27127347-27127433, 27127753-27127821,27128012-27128041 Length = 1373 Score = 112 bits (269), Expect = 3e-25 Identities = 62/178 (34%), Positives = 99/178 (55%), Gaps = 3/178 (1%) Frame = +3 Query: 99 KEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIK 278 +E +++LP V E+VLK + +R + KR E +V+E+R K Sbjct: 3 EEGTQQLPYVRETVLKKRKVNEDWAVKNRERKAAKRQRRRDDGKGAIKRPEDFVREFRNK 62 Query: 279 ERDEIRPARQARNRGNYYVPGE---AKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGV 449 E D +R + R + P E +KL F IRI G + P +R++L+ RL Q+ GV Sbjct: 63 ELDFVR--MKTRLKVRKLPPAETLNSKLVFAIRIPGTMDLHPHMRRILRKLRLTQVLTGV 120 Query: 450 FVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKKL 623 F++ AT+ L + EP+I +G+PNLK+V++L+YK+G L + P+TSN ++EK L Sbjct: 121 FLKATDATMKRLLVVEPFITYGFPNLKNVKDLIYKKGRGFLDKEPFPLTSNDLIEKAL 178 >10_06_0101 + 10736987-10737100,10737263-10737301,10737397-10737474, 10737539-10737685,10737781-10737888,10738115-10738449, 10738572-10739544,10739702-10739980 Length = 690 Score = 29.5 bits (63), Expect = 2.3 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = +3 Query: 192 TLKRRSSAIKKKREIFKRAEQYVKEYRIKE 281 TL+ R+ IK KRE+F+R KE+RI+E Sbjct: 149 TLETRTDPIKLKREVFRRKR---KEHRIQE 175 >08_02_0077 - 11979497-11979654,11980012-11982178 Length = 774 Score = 29.1 bits (62), Expect = 3.0 Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Frame = +1 Query: 136 QCSSIVRGERLFALGDYRLR*RGVL-LPSRRRGKSSRGLNSTSRNTASRNVMKSDQPDKH 312 QC S + G+ L + DY + L + + G++ G N + +++DQP+ + Sbjct: 186 QCDSAIEGQELIHVEDYEQSEKTELKINGQENGENRAGKEQFDCNVPVKQEIRTDQPEAN 245 Query: 313 AI 318 + Sbjct: 246 GV 247 >03_06_0596 + 34964109-34964189,34964286-34964481,34964567-34964775, 34964868-34964970,34965053-34965227,34965617-34965883, 34965966-34966311,34966396-34966533,34966645-34966770, 34966866-34967078,34967171-34967462,34967559-34967755, 34967844-34968194,34968290-34968874 Length = 1092 Score = 29.1 bits (62), Expect = 3.0 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +3 Query: 219 KKKREIFKRAEQYVKEYRIKERDEIRPARQARNRG 323 KKKR FKRAE Y + E DE P + G Sbjct: 689 KKKRLFFKRAENQSPAYALGEIDEGAPGAENEKAG 723 >07_03_0123 - 13688562-13689146,13689233-13689583,13689665-13689861, 13689954-13690072,13690103-13690245,13690332-13690544, 13690649-13690774,13690891-13691028,13691109-13691454, 13691532-13691798,13691939-13691983,13692148-13692349, 13692405-13692507,13692599-13692810,13692891-13693113, 13693211-13693291 Length = 1116 Score = 28.7 bits (61), Expect = 4.0 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = +3 Query: 219 KKKREIFKRAEQYVKEYRIKERDEIRPARQARNRG 323 KKKR FKRAE Y + E +E P + G Sbjct: 713 KKKRSFFKRAENQSPAYALGEIEEGAPGAENEKAG 747 >12_02_0398 - 18586985-18587480,18587669-18587687,18588317-18588544, 18589699-18589966 Length = 336 Score = 28.3 bits (60), Expect = 5.3 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 337 PGKPNWHLSSESVVSTKFHRRSVKFCNCLDCAK 435 PG+ NW S +V TK R+S + N +D A+ Sbjct: 100 PGQANWFPDSNLLVDTKGRRQSRRIKNLMDEAE 132 >01_06_0457 - 29524544-29525962,29526518-29526606,29526841-29526892, 29527573-29527677,29528181-29528208,29528279-29528343, 29528808-29528880,29528932-29529113 Length = 670 Score = 27.9 bits (59), Expect = 7.0 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +2 Query: 500 LHCLGIPQLKECP*VSIQTWIRQAEW 577 LHC G+PQ+K +W+R +E+ Sbjct: 109 LHCSGLPQIKLLSRFRRSSWVRTSEY 134 >03_02_0651 + 10183050-10184167,10184350-10184974,10185023-10185208, 10185325-10185660 Length = 754 Score = 27.5 bits (58), Expect = 9.2 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 Query: 316 IVATTTFPGKPNWHLSSESVVSTKFH 393 +V +P NWHLSS S + K H Sbjct: 573 VVLNDLYPKCSNWHLSSTSYLQAKRH 598 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,779,696 Number of Sequences: 37544 Number of extensions: 316194 Number of successful extensions: 782 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 765 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 782 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1525730988 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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