Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30054
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003139-2|AAB54165.1| 244|Caenorhabditis elegans Ribosomal pro... 201 4e-52
U41106-1|AAA82409.1| 347|Caenorhabditis elegans Hypothetical pr... 32 0.29
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 29 3.6
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 29 3.6
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 29 3.6
AL117202-24|CAD27612.1| 565|Caenorhabditis elegans Hypothetical... 29 3.6
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 29 3.6
Z83238-7|CAB05797.1| 313|Caenorhabditis elegans Hypothetical pr... 28 6.3
>AF003139-2|AAB54165.1| 244|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 7 protein.
Length = 244
Score = 201 bits (490), Expect = 4e-52
Identities = 93/172 (54%), Positives = 127/172 (73%)
Frame = +3
Query: 108 SKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERD 287
+KK+P VPE+VLK Q + + +KK + FKRAE+YV+EYR +++
Sbjct: 4 TKKVPQVPETVLKRRKQRADARTKAAQHKVTVAAKNKEKKTQYFKRAEKYVQEYRNAQKE 63
Query: 288 EIRPARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNK 467
+R R+A +G++YVP E K+AFV+RIRGINQ+ PK RK LQ+ RLRQINNGVFV+LNK
Sbjct: 64 GLRLKREAEAKGDFYVPAEHKVAFVVRIRGINQLHPKPRKALQILRLRQINNGVFVKLNK 123
Query: 468 ATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKKL 623
AT+ +LRI EPY+AWGYPN K++ +L+YKRG+AK+ G R+PIT N+IVE+ L
Sbjct: 124 ATLPLLRIIEPYVAWGYPNNKTIHDLLYKRGYAKVDGNRVPITDNTIVEQSL 175
>U41106-1|AAA82409.1| 347|Caenorhabditis elegans Hypothetical
protein W06A11.4 protein.
Length = 347
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +1
Query: 220 RRRGKSSRGLNSTSRNTASRNVMKSDQPDKHAIVATTTFPGKPNWHLSSESVVSTKF 390
++R K SR SR ASR +K K A +T P +PN + S S S ++
Sbjct: 21 KKRRKMSRKFTKKSRKRASRASIKLANEQKAKKYANSTVPMEPNVYTDSGSPFSNRY 77
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 211 LPSRRRGKSSRGLNSTSRNTASRNVMKSDQPDKHAIVATTTFPGKPNWHLSSESVVSTKF 390
LP+ + KSS NS RN N + + Q H + + + N+ S+ V++ KF
Sbjct: 79 LPNTFQTKSSFPPNSDERNIGKENEVSARQEIAHKLKSVHNYSDATNFD-PSKKVITQKF 137
Query: 391 HRRS 402
+ S
Sbjct: 138 SQES 141
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 211 LPSRRRGKSSRGLNSTSRNTASRNVMKSDQPDKHAIVATTTFPGKPNWHLSSESVVSTKF 390
LP+ + KSS NS RN N + + Q H + + + N+ S+ V++ KF
Sbjct: 79 LPNTFQTKSSFPPNSDERNIGKENEVSARQEIAHKLKSVHNYSDATNFD-PSKKVITQKF 137
Query: 391 HRRS 402
+ S
Sbjct: 138 SQES 141
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 211 LPSRRRGKSSRGLNSTSRNTASRNVMKSDQPDKHAIVATTTFPGKPNWHLSSESVVSTKF 390
LP+ + KSS NS RN N + + Q H + + + N+ S+ V++ KF
Sbjct: 79 LPNTFQTKSSFPPNSDERNIGKENEVSARQEIAHKLKSVHNYSDATNFD-PSKKVITQKF 137
Query: 391 HRRS 402
+ S
Sbjct: 138 SQES 141
>AL117202-24|CAD27612.1| 565|Caenorhabditis elegans Hypothetical
protein Y47D3A.30 protein.
Length = 565
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 518 VSPSNVRLGDT*HIHSSLIQTYKHTIVYLAQSKQLQNF 405
++PS RL H H+ L Q +++ I Q K++Q F
Sbjct: 496 LAPSGTRLSTVRHTHTLLFQIWQYKINSFCQIKKIQFF 533
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 211 LPSRRRGKSSRGLNSTSRNTASRNVMKSDQPDKHAIVATTTFPGKPNWHLSSESVVSTKF 390
LP+ + KSS NS RN N + + Q H + + + N+ S+ V++ KF
Sbjct: 79 LPNTFQTKSSFPPNSDERNIGKENEVSARQEIAHKLKSVHNYSDATNFD-PSKKVITQKF 137
Query: 391 HRRS 402
+ S
Sbjct: 138 SQES 141
>Z83238-7|CAB05797.1| 313|Caenorhabditis elegans Hypothetical
protein T08G3.8 protein.
Length = 313
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -2
Query: 268 YSLTYCSALLKISLFFLMAEERLFSVTCNLLVRRASLLLRCLSTDSGTAGSFLLSSFPLT 89
YS+ L+K+S +FL + + +S + ++ R ++++ ++ FL+ PLT
Sbjct: 24 YSMPTVYILIKLSYYFLYRKNKCYSTDLHPVLFRQFMIMQ-IACFFNVCIKFLIFRIPLT 82
Query: 88 G 86
G
Sbjct: 83 G 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,451,174
Number of Sequences: 27780
Number of extensions: 274302
Number of successful extensions: 841
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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