Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30051
         (620 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    89   6e-17
UniRef50_Q5PFI0 Cluster: Large repetitive protein; n=8; Salmonel...    35   1.8  
UniRef50_Q9BGU9 Cluster: Putative uncharacterized protein; n=1; ...    34   3.1  
UniRef50_Q7SEK3 Cluster: Predicted protein; n=5; Pezizomycotina|...    34   3.1  
UniRef50_UPI0000DBFC45 Cluster: UPI0000DBFC45 related cluster; n...    33   7.3  
UniRef50_UPI0000584AAA Cluster: PREDICTED: similar to MGC69335 p...    32   9.6  
UniRef50_Q7ZVH5 Cluster: Zgc:56010; n=2; Danio rerio|Rep: Zgc:56...    32   9.6  
UniRef50_Q5FSG1 Cluster: Putative transport protein; n=1; Glucon...    32   9.6  
UniRef50_Q7RRP7 Cluster: Putative uncharacterized protein PY0067...    32   9.6  
UniRef50_A5K3I2 Cluster: Putative uncharacterized protein; n=1; ...    32   9.6  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 89.4 bits (212), Expect = 6e-17
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = +1

Query: 421  RICHRTARHRSRVNPYYLELLHSSTVRFQRSFLPRTIWLWSELPYYSIFLERYDM 585
            R  HRTARHRSRV+PYYLE L SSTVRFQRSFLPRTI LW+ELP  ++F ERYDM
Sbjct: 903  RFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELP-STVFPERYDM 956


>UniRef50_Q5PFI0 Cluster: Large repetitive protein; n=8;
            Salmonella|Rep: Large repetitive protein - Salmonella
            paratyphi-a
          Length = 3824

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = -3

Query: 588  AHVIALEKNTVVGELTPKPDGTWQKRSLKTHCGRM*QFQVVWINSTPVAGGXMANASLFT 409
            A +   E  TV+G  T +PDG W   +     G      V+   +T  AG    N++ FT
Sbjct: 2401 ATITLYENGTVIGTTTAQPDGAWSVSTSTLASGT----HVITAVATDAAGNSSPNSTAFT 2456

Query: 408  XTFNLT 391
             T + T
Sbjct: 2457 LTVDTT 2462


>UniRef50_Q9BGU9 Cluster: Putative uncharacterized protein; n=1;
           Macaca fascicularis|Rep: Putative uncharacterized
           protein - Macaca fascicularis (Crab eating macaque)
           (Cynomolgus monkey)
          Length = 100

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
 Frame = +1

Query: 154 LHAMYLTHTRMHT---IYCQTFVLDVCCQIENRLKIVCLC*YFFYCXLGEICAY 306
           +H    THT  HT   IY  T     C  I  +   +C+C Y + C    +C Y
Sbjct: 14  VHIYIYTHTHTHTHIHIYIHTLREQSCLSIHTQSMYICVCIYMYMC----VCVY 63


>UniRef50_Q7SEK3 Cluster: Predicted protein; n=5;
           Pezizomycotina|Rep: Predicted protein - Neurospora
           crassa
          Length = 526

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = -2

Query: 274 KNINKDKQFLIYSQFDNRRQEQKFDNK*YACVCASNTWHVVCVMFSLFI*CIFYALF 104
           KN +K++    +S  +N R E   D   YA VC    W ++C++  + I  I   L+
Sbjct: 266 KNNSKNQDMWGWSCVENHRAELFKDKVDYALVCRLQNWGLICMIIEIIIEIISITLY 322


>UniRef50_UPI0000DBFC45 Cluster: UPI0000DBFC45 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBFC45 UniRef100 entry -
           Rattus norvegicus
          Length = 272

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -1

Query: 194 IVCMRVCVKYMACS-VCNVFFIHLMYLLCIILKKY*HCALLLYILYKCV 51
           + C+ +C   + C+ VC   +++++  L I L  + +  + +YI+Y CV
Sbjct: 23  LFCVYICTSIVVCTRVCLCMYMYVVMCLYICLLMHVYMYMCMYIVYLCV 71


>UniRef50_UPI0000584AAA Cluster: PREDICTED: similar to MGC69335
           protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to MGC69335 protein -
           Strongylocentrotus purpuratus
          Length = 286

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +1

Query: 442 RHRSRVNPYYLELLHSSTVR--FQRSFLPRTIWLWSEL 549
           +  +++   + +++H  T +  F+ SF PRTIW W+ L
Sbjct: 216 KRETKILSDFKDMVHKKTTKSNFKYSFYPRTIWTWNHL 253


>UniRef50_Q7ZVH5 Cluster: Zgc:56010; n=2; Danio rerio|Rep: Zgc:56010
           - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 256

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
 Frame = +1

Query: 94  YFFKIMHKRYIK*----IKKTLHTLHAMYLTHTRMHTIYCQTFVLDVCCQIENRLKI-VC 258
           YFF +  ++ ++     IK+     HA  L H R+H   C       C    NRL+  +C
Sbjct: 156 YFFDLWKEKMLQDTKDIIKEKRKRSHAKALAHKRLHANTCTHKCSGAC--THNRLRASIC 213

Query: 259 LC*YFFYCXLGEICAYR 309
            C +  +C    +C  R
Sbjct: 214 ACAFANFCACERLCMQR 230


>UniRef50_Q5FSG1 Cluster: Putative transport protein; n=1;
           Gluconobacter oxydans|Rep: Putative transport protein -
           Gluconobacter oxydans (Gluconobacter suboxydans)
          Length = 499

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +2

Query: 458 LIHTTWNCYIRPQCVFRDLFCHVPSGFGVSSPTTVFFSSAMTCAFLLLTW 607
           +I T  NCY   +C++  LF  V +GF   SPT     +  + AFLL  W
Sbjct: 284 VITTLANCYAAARCLY--LF--VETGFAPRSPTIRLLPATDSTAFLLTRW 329


>UniRef50_Q7RRP7 Cluster: Putative uncharacterized protein PY00671;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY00671 - Plasmodium yoelii yoelii
          Length = 1116

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = -1

Query: 149 CNVFFIHLMYLLCIILKKY*HCALLLYILYKCVK 48
           CNV++I L YLLCI+ KK+     LLY + K +K
Sbjct: 237 CNVYYIAL-YLLCILKKKH---VFLLYTILKILK 266


>UniRef50_A5K3I2 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 3120

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = -1

Query: 149  CNVFFIHLMYLLCIILKKY-*HCALLLYILYKCVKFH 42
            CNV++  L YLLC++ +++  H  +LL +L K  KFH
Sbjct: 2229 CNVYYAGL-YLLCVLKRRHVFHLMVLLKMLRKFCKFH 2264


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,316,133
Number of Sequences: 1657284
Number of extensions: 10628242
Number of successful extensions: 25496
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 24654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25472
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)