Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30051
         (620 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z83216-3|CAB05674.2|  232|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical
           protein F10D7.1 protein.
          Length = 656

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -1

Query: 191 VCMRVCVKYMAC-SVCNVFFIHLMYLLCIILKKY*HCALLLYILYKCVKF 45
           V +R+CV  +AC ++C++ +I   YL+ I    + +CA LL  + K   F
Sbjct: 50  VNLRLCVFLLACDALCSLCYI-FTYLINIFFSHFSNCASLLLEVIKMSTF 98


>Z46794-12|CAA86778.2| 1468|Caenorhabditis elegans Hypothetical
           protein R06F6.8a protein.
          Length = 1468

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +1

Query: 223 CCQIENRLKIVCLC*YFFYCXLGEICAYRSXKYNHNSVQTY 345
           CC + ++  ++      F C  G++CAY   + N + VQ++
Sbjct: 257 CCDVNHKFLLI-----LFGCKNGDVCAYNIDELNGSLVQSF 292


>Z46794-11|CAA86785.2| 1470|Caenorhabditis elegans Hypothetical
           protein R06F6.8b protein.
          Length = 1470

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +1

Query: 223 CCQIENRLKIVCLC*YFFYCXLGEICAYRSXKYNHNSVQTY 345
           CC + ++  ++      F C  G++CAY   + N + VQ++
Sbjct: 257 CCDVNHKFLLI-----LFGCKNGDVCAYNIDELNGSLVQSF 292


>Z83216-3|CAB05674.2|  232|Caenorhabditis elegans Hypothetical
           protein C08F11.3 protein.
          Length = 232

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/43 (25%), Positives = 25/43 (58%)
 Frame = +2

Query: 185 CILFIVKLLFLTSVVKLRID*KLFVFVNIFFTVXLAKFVLIEV 313
           C ++ + ++ + ++V+   D  +F F+ IF+ V + +F  I V
Sbjct: 147 CFVWTLIIITIRNLVEWTCDSNIFTFLIIFYLVFILRFTYIHV 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,832,022
Number of Sequences: 27780
Number of extensions: 279311
Number of successful extensions: 645
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)