Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30051
         (620 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g74810.1 68414.m08667 anion exchange family protein contains ...    31   0.81 
At1g15460.1 68414.m01858 anion exchange family protein member of...    29   1.9  

>At1g74810.1 68414.m08667 anion exchange family protein contains
           Pfam profile: PF00955 Anion exchanger family
          Length = 683

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +2

Query: 488 RPQCVFRDLFCHVPSGFGVSSPTT-VFFSSAM 580
           R  C  +D    + SGFG+ +PTT VFF+SA+
Sbjct: 23  RALCYKQDWIAGLRSGFGILAPTTYVFFASAL 54


>At1g15460.1 68414.m01858 anion exchange family protein member of
           the PF|00955 Anion exchanger family
          Length = 683

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 488 RPQCVFRDLFCHVPSGFGVSSPTT-VFFSSAM 580
           R  C   D    + SGFG+ +PTT +FF+SA+
Sbjct: 23  RALCYKEDWVAGLRSGFGILAPTTYIFFASAL 54


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,539,791
Number of Sequences: 28952
Number of extensions: 235544
Number of successful extensions: 509
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)