Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30050
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   2.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   4.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.2  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = -3

Query: 237 SLVSFGHLFQA--SFFPGPLI-FLTSCLPSPIFF 145
           SL SFG+LF A  SF+    I  L + L +P+FF
Sbjct: 66  SLTSFGYLFCASLSFYKAFKIGILLNQLITPLFF 99



 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 288 LYQYPHLLLYLGFSGPFSL 232
           L  YPHL  +  FS P ++
Sbjct: 351 LNTYPHLFNFFEFSVPLAI 369


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 387 FSFLCQYSNQLTRSHCRFFQQ 325
           F FLC+++ +  +++  FF Q
Sbjct: 144 FDFLCRHTVEYFQNYIHFFYQ 164


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 297 NPGLYQYPHLLLYLGFSGPFSLVSF 223
           +PG   +P+ ++  G+S P S  S+
Sbjct: 120 SPGPPSHPYTVISNGYSSPMSSGSY 144


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 396 VKQFSFLCQYSNQLTRSHCRFF 331
           ++  S +  Y NQ TRS    F
Sbjct: 116 LQNVSLIINYENQRTRSRIHLF 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,368
Number of Sequences: 336
Number of extensions: 1144
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)