Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30044
(454 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 223 1e-57
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 205 3e-52
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 198 3e-50
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 191 5e-48
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 191 7e-48
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 188 6e-47
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 125 5e-28
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 120 1e-26
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 119 3e-26
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 116 2e-25
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 110 2e-23
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 105 3e-22
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 105 4e-22
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 100 2e-20
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 60 9e-20
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 97 2e-19
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 78 8e-14
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 52 6e-06
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 42 0.005
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.033
UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26; Epsilon... 38 0.076
UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1... 38 0.10
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 38 0.13
UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellula... 37 0.18
UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021; ... 36 0.41
UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15; Bacteri... 36 0.41
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 36 0.54
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.71
UniRef50_Q62GL9 Cluster: 30S ribosomal protein S8; n=68; Bacteri... 33 2.2
UniRef50_A1USQ8 Cluster: 30S ribosomal protein S8; n=5; Bacteria... 33 2.2
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_Q73NX9 Cluster: ISTde2, transposase; n=4; Bacteria|Rep:... 32 5.0
UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas d... 32 6.6
UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2; ... 32 6.6
UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellula... 32 6.6
UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1; Bdellovi... 32 6.6
UniRef50_A6GH34 Cluster: Rieske (2Fe-2S) region; n=1; Plesiocyst... 31 8.7
UniRef50_Q22ZD3 Cluster: Putative uncharacterized protein; n=2; ... 31 8.7
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 223 bits (545), Expect = 1e-57
Identities = 104/119 (87%), Positives = 114/119 (95%), Gaps = 1/119 (0%)
Frame = +1
Query: 19 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 199 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARKK 372
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEAR+K
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRK 119
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 205 bits (501), Expect = 3e-52
Identities = 97/120 (80%), Positives = 109/120 (90%), Gaps = 1/120 (0%)
Frame = +1
Query: 16 SMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAG 195
+MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR G
Sbjct: 123 TMVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDG 182
Query: 196 KIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARKK 372
KIVVNLTGRLNKCGVIS RFDV + D+++W NLLP RQFG++VLTT GI+DHEEAR+K
Sbjct: 183 KIVVNLTGRLNKCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRK 242
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 198 bits (484), Expect = 3e-50
Identities = 93/119 (78%), Positives = 106/119 (89%), Gaps = 1/119 (0%)
Frame = +1
Query: 19 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 199 IVVNLTGRLNKCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARKK 372
IVV L GRLNKCGVISPRFDV + +IE WT LLPSRQFG++VLTTS GIMDHEEAR+K
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRK 119
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 191 bits (466), Expect = 5e-48
Identities = 91/112 (81%), Positives = 101/112 (90%), Gaps = 1/112 (0%)
Frame = +1
Query: 40 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 219
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 220 RLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARKK 372
RLNKCGVI+ RFDV D+E+W NL PS QFG++VLTTS GIMDHEEAR+K
Sbjct: 234 RLNKCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQK 285
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 191 bits (465), Expect = 7e-48
Identities = 90/121 (74%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
Frame = +1
Query: 13 LSMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 192
++MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 193 GKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARK 369
GK+VVNLTGRLNKCGVISPRFDV + D+E+W NLLP+RQFG++VLTT GIMD EE R+
Sbjct: 157 GKMVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQ 216
Query: 370 K 372
K
Sbjct: 217 K 217
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 188 bits (457), Expect = 6e-47
Identities = 89/119 (74%), Positives = 104/119 (87%), Gaps = 1/119 (0%)
Frame = +1
Query: 19 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTVM KHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTVM-KHGYIGEFEITDDHRAGK 59
Query: 199 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARKK 372
+VV LT RLNKCGVISPRF V + D+E+W NLLPS QFG+++LTTS GI D EEAR+K
Sbjct: 60 MVVYLTDRLNKCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRK 118
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 125 bits (301), Expect = 5e-28
Identities = 59/119 (49%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
Frame = +1
Query: 19 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 199 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARKK 372
V L GR+NK G I PRF V +++ E+W LP+ +FG L+++TS G+M H+EA +K
Sbjct: 61 YRVQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEK 119
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 120 bits (290), Expect = 1e-26
Identities = 56/114 (49%), Positives = 82/114 (71%), Gaps = 1/114 (0%)
Frame = +1
Query: 34 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 213
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 214 TGRLNKCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARKK 372
GR+N C ++ R DV +IE++T LP+RQ+GY+V+TT GI+DHEEA K+
Sbjct: 65 QGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKR 118
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 119 bits (287), Expect = 3e-26
Identities = 59/119 (49%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Frame = +1
Query: 19 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 199 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARKK 372
V L GR+NKCG I PR+ V ERW LP++ FG L+LTTS G+M EAR K
Sbjct: 61 YSVTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDK 119
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 116 bits (280), Expect = 2e-25
Identities = 55/118 (46%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
Frame = +1
Query: 19 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 199 IVVNLTGRLNKCGVISPRFDVPINDIERWTN----LLPSRQFGYLVLTTSGGIMDHEE 360
I+V L GR+NKCG ISPR+ + N + R + LPS++ G ++++T G+M H +
Sbjct: 61 IIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRD 118
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 110 bits (264), Expect = 2e-23
Identities = 51/109 (46%), Positives = 78/109 (71%), Gaps = 1/109 (0%)
Frame = +1
Query: 37 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 216
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 217 GRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEE 360
GRLN+CG ISP + V + IE + T LLP+RQFG+++ TS GI+DH+E
Sbjct: 65 GRLNRCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKE 113
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 105 bits (253), Expect = 3e-22
Identities = 50/112 (44%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
Frame = +1
Query: 37 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 216
L+D + +I NA + GK +V+I P S +I + L VM + YI FE++++ R GK V L+
Sbjct: 6 LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELS 65
Query: 217 GRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARK 369
+N CGVI PR V ++IER+ + LP++ FG ++LTT+ GIM H EARK
Sbjct: 66 DTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARK 117
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 105 bits (252), Expect = 4e-22
Identities = 49/116 (42%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Frame = +1
Query: 28 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 207
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 208 NLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARKK 372
L+G +N CG I PRF + + E + LP+R FG L+++T+ G+M ++ARK+
Sbjct: 63 ELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQ 118
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 100 bits (239), Expect = 2e-20
Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Frame = +1
Query: 13 LSMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 192
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 193 GKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARK 369
GK V L G +N+CG + PR+ ++ E+W LP+R +G L++TTS G+M H EAR+
Sbjct: 76 GKFEVELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEARE 135
Query: 370 K 372
+
Sbjct: 136 E 136
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 60.1 bits (139), Expect(2) = 9e-20
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 151 GYIGEFEIVDDHRAGKIVVNLTGRLNKCGVI 243
GYI EFE +DDHRAGKIVV L GR+NKCGVI
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINKCGVI 137
Score = 58.4 bits (135), Expect(2) = 9e-20
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +1
Query: 13 LSMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 150
+S V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 96.7 bits (230), Expect = 2e-19
Identities = 49/119 (41%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Frame = +1
Query: 19 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 199 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARKK 372
V+L ++ KCG ISPRF V + W LPS G LV+TT+ G+M H EA ++
Sbjct: 61 FSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAER 119
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 78.2 bits (184), Expect = 8e-14
Identities = 35/115 (30%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Frame = +1
Query: 31 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 210
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R I +
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIE 63
Query: 211 LTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARKK 372
L+ N+ I PRF V +++E++ LP+ FG L+L+TS G++ + EA+++
Sbjct: 64 LSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQ 118
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 52.0 bits (119), Expect = 6e-06
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +1
Query: 127 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 282
F+TV MK G+FEIVD+ G+I V+L G LNK GVI FDV + D+E+
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLEK 51
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 42.3 bits (95), Expect = 0.005
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +1
Query: 175 VDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDI 276
VDDH++G+I++ GRLNK GVIS R DV + +
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 39.5 bits (88), Expect = 0.033
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +1
Query: 157 IGEFEIVDDHRAGKIVVNLTGRLNK 231
IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQ 33
>UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26;
Epsilonproteobacteria|Rep: 30S ribosomal protein S8 -
Wolinella succinogenes
Length = 131
Score = 38.3 bits (85), Expect = 0.076
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Frame = +1
Query: 31 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 210
++++D+L I NA R + +K++V L V + G+I ++++D + GK +N
Sbjct: 4 DIIADSLTRIRNAAMRRLDYTTLY-YAKIVVSILEVFLAKGFIESYKVID--KDGKQSIN 60
Query: 211 LTGRLNKCG--VIS--PRFDVPINDIERWTNLLPSRQFGY--LVLTTSGGIMDHEEARK 369
+ + ++ G VIS R + + + L + GY +V++TS G++ +EEA K
Sbjct: 61 VVLKYDEKGRSVISEIKRISKSGRRVYKGRDELKRFKNGYGTIVVSTSKGVIGNEEAYK 119
>UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1;
Acanthamoeba castellanii|Rep: Mitochondrial ribosomal
protein S8 - Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 37.9 bits (84), Expect = 0.10
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +1
Query: 28 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV- 204
M++LS+ + + QV+++ SK+ + L+V+ K GYI F I D ++
Sbjct: 1 MSLLSNMISIVKVGYNARHLQVIVQN-SKLCINVLSVLYKLGYIRGFIIKDQKNITILLK 59
Query: 205 -VNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEEA 363
+N + VIS ++ L + G+L+L+TS GI+ EE+
Sbjct: 60 YINNKPAVRNIAVISTPGRRTYLKHKKLEKFLTKKDSGFLILSTSKGILTDEES 113
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 37.5 bits (83), Expect = 0.13
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Frame = +1
Query: 37 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF-EIVDDHRAGKIVVNL 213
++D L + N + G +V+ PCSKV++ L ++++ GYI F E V K++
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESFTEEVRGDSGIKVLKVF 65
Query: 214 TGRLNKCGVISP--RFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEAR 366
N I R P + + +P G +++TS GIM AR
Sbjct: 66 LKYFNSAAAIRKIVRVSRPGKRVYSSADKMPRFYNALGIYIVSTSKGIMLDSHAR 120
>UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellular
organisms|Rep: 30S ribosomal protein S8 - Bacillus
anthracis
Length = 132
Score = 37.1 bits (82), Expect = 0.18
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Frame = +1
Query: 19 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MV + ++D L I NA + + L P SK+ + ++ + G+I + E ++D++ G
Sbjct: 1 MVMTDPIADMLTRIRNANMV-RHEKLEVPASKIKKEIAELLKREGFIRDVEYIEDNKQGI 59
Query: 199 IVVNLTGRLNKCGVIS--PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEAR 366
+ + L N VI+ R P + + +P G +++TS G+M ++AR
Sbjct: 60 LRIFLKYGANNERVITGLKRISKPGLRVYAKADEVPRVLNGLGIALVSTSKGVMTDKDAR 119
Query: 367 K 369
+
Sbjct: 120 Q 120
>UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 90.t00021 - Entamoeba histolytica HM-1:IMSS
Length = 627
Score = 35.9 bits (79), Expect = 0.41
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 184 HRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 336
H G I ++L RLN+ GV+ + + +I + LL FGYL +T+S
Sbjct: 192 HEIGNIHISLLNRLNQIGVVIGIYSNMLEEIPEYVTLL--HHFGYLTITSS 240
>UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15;
Bacteria|Rep: 30S ribosomal protein S8 - Bacteroides
thetaiotaomicron
Length = 131
Score = 35.9 bits (79), Expect = 0.41
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Frame = +1
Query: 37 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 216
++D L + NA K +V+ P S + + ++ + GYI ++ V+D G I V L
Sbjct: 5 IADYLTRLRNAIG-AKHRVVEVPASNLKKEITKILFEKGYILNYKFVEDGPQGTIKVALK 63
Query: 217 -GRLNKCGVISPRFDVPINDIERWTNL--LPS--RQFGYLVLTTSGGIMDHEEA 363
+NK I V + ++T +P G +++TS G+M ++EA
Sbjct: 64 YDSVNKVNAIKKLERVSSPGMRKYTGYKDMPRVINGLGIAIISTSKGVMTNKEA 117
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 35.5 bits (78), Expect = 0.54
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Frame = +1
Query: 37 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 216
+S+ + + NA++ + V I P SK+ ++++ GYI F +DD + G + V L
Sbjct: 8 VSNYMAQLRNAQEAEQTYVDI-PASKLKRAMTQILLEKGYIKNFVNIDDEKQGLLRVYLK 66
Query: 217 -GRLNKCGV-ISPRFDVPINDIERWTNLLP--SRQFGYLVLTTSGGIMDHEEARK 369
++ + + R P ++ LP G ++L+TS G+M +EAR+
Sbjct: 67 YDEYDQPAIRMLERVSRPGRREYADSDNLPEVKNGLGIVILSTSRGVMSDKEARR 121
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.71
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 31 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 174
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q62GL9 Cluster: 30S ribosomal protein S8; n=68;
Bacteria|Rep: 30S ribosomal protein S8 - Burkholderia
mallei (Pseudomonas mallei)
Length = 131
Score = 33.5 bits (73), Expect = 2.2
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Frame = +1
Query: 37 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 216
++D L I NA+ K V + P SKV V V+ GYI +F + D ++ + L
Sbjct: 7 IADMLTRIRNAQMVEKVSVSM-PSSKVKVAIAQVLKDEGYIDDFAVKADGAKAELNIALK 65
Query: 217 GRLNKCGVIS--PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEAR 366
+ VI R P + R N +P G +++T G+M +AR
Sbjct: 66 YYAGR-PVIERLERVSKPGLRVYRGRNEIPQVMNGLGVAIVSTPKGVMTDRKAR 118
>UniRef50_A1USQ8 Cluster: 30S ribosomal protein S8; n=5;
Bacteria|Rep: 30S ribosomal protein S8 - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 132
Score = 33.5 bits (73), Expect = 2.2
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 5/117 (4%)
Frame = +1
Query: 37 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 216
L D L I NA R K +V + P SK+ + L V+ GYI + +D GK +
Sbjct: 7 LGDMLTRIRNAISRKKSKV-VTPASKLRARVLDVLKLEGYICGYNQIDSGN-GKFEFEIE 64
Query: 217 GR-LNKCGVISP--RFDVPINDIERWTN--LLPSRQFGYLVLTTSGGIMDHEEARKK 372
+ VI R P + T L + G +L+T G+M EAR++
Sbjct: 65 LKYFENSSVIRTISRISKPGRRVYVSTKSILQVANGLGISILSTPKGVMTDHEAREQ 121
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 2.9
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 22 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 192
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q73NX9 Cluster: ISTde2, transposase; n=4; Bacteria|Rep:
ISTde2, transposase - Treponema denticola
Length = 358
Score = 32.3 bits (70), Expect = 5.0
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
Frame = +1
Query: 10 ILSMVRMNVLSDALKSI--HNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDD 183
+L M + + KSI N + ++ L C K K T H Y +E +
Sbjct: 250 MLEMKYKDEFKEIFKSITMDNGTEFLDQEGLETSCLKEGEKRTTCYYAHPY-SSWERGSN 308
Query: 184 HRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGY 318
A K++ + K IS D+ I +E W N P R FGY
Sbjct: 309 ENANKLIRRF---IPKGADISKYSDIQIKQVENWINNYPRRMFGY 350
>UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas
danica|Rep: Ribosomal protein S8 - Ochromonas danica
Length = 128
Score = 31.9 bits (69), Expect = 6.6
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Frame = +1
Query: 37 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 216
L D L S+ NA K V I+ S++I K+L ++ K G I F D +VNL
Sbjct: 5 LIDFLLSLKNASLAKKDFVKIKE-SRLISKYLPILYKEGIIQSFFKKQDSCNSFYIVNLR 63
Query: 217 GRLNKCGVISPR-FDVP--INDIERWTNLLPSRQFGYLVLTTSGGIMDH 354
NK + P I I R + + L+L+T GIM H
Sbjct: 64 HFQNKVVTQDIQLISTPSKIKKISRKELISLHLKNKMLILSTPKGIMSH 112
>UniRef50_A2WMK5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 186
Score = 31.9 bits (69), Expect = 6.6
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +1
Query: 214 TGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTSGGIMDHEE 360
T ++ C +++P D IN + + +L +GY+V+TT G++DHEE
Sbjct: 134 TWQIYFCNMLAPSLD--INLMLYYLSL--HSVWGYVVITTPNGVLDHEE 178
>UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 136
Score = 31.9 bits (69), Expect = 6.6
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +1
Query: 31 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 210
+ ++D L I NA V + P +++ V+ + G++ E++ + ++V+
Sbjct: 6 DTIADMLTRIRNATMARHESVAV-PATRMTRSIARVLHEEGFVSEWKEEGEGIQARVVLR 64
Query: 211 LT--GRLNKCGVIS---PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGGIMDHEEARK 369
L G+ C I R P + R LP G +++TS GIM EARK
Sbjct: 65 LKYKGKGRNCRPIINGLKRVSRPGLRVYRNHKELPRVLGGIGIAIISTSNGIMTDREARK 124
Query: 370 K 372
+
Sbjct: 125 Q 125
>UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1;
Bdellovibrio bacteriovorus|Rep: 30S ribosomal protein S8
- Bdellovibrio bacteriovorus
Length = 129
Score = 31.9 bits (69), Expect = 6.6
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Frame = +1
Query: 28 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 207
M+ +S L I NA K + + P SKV +++ G+I F++ D + G + V
Sbjct: 1 MDTISQFLTMIRNAGA-AKHEKVDMPASKVRAGIAQILVNEGFIRSFKVAKDSKQGIMRV 59
Query: 208 NLTGRLNKCG--VIS--PRFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARK 369
L + ++ G I+ R P + ++ +P+ + G +++TS GIM ++A +
Sbjct: 60 YL--KYDEAGGHAINNIDRVSRPGRRVYVKSDKIPTVRSGMGMSIISTSKGIMSGKQATE 117
Query: 370 K 372
+
Sbjct: 118 Q 118
>UniRef50_A6GH34 Cluster: Rieske (2Fe-2S) region; n=1; Plesiocystis
pacifica SIR-1|Rep: Rieske (2Fe-2S) region -
Plesiocystis pacifica SIR-1
Length = 578
Score = 31.5 bits (68), Expect = 8.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 187 RAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT 288
R G I + G+ N+ G ++P FD+P + E WT
Sbjct: 125 RNGLIYIYYAGKGNEHGEVTPAFDIPELETEGWT 158
>UniRef50_Q22ZD3 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 853
Score = 31.5 bits (68), Expect = 8.7
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 202 VVNLTGRLNKCGVISPRFDVPINDIERWTNL---LPSRQFGYLVLTTSGGIMDHEEARKK 372
++ +++ G I D+ N IE T L LPS+ GY++ + +++++R+K
Sbjct: 405 ILERLNEIDRAGKIVVIVDLDANTIEEDTFLNIQLPSKAKGYIIKELTKAEYEYKQSREK 464
Query: 373 TPWRK 387
W K
Sbjct: 465 NAWEK 469
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,676,343
Number of Sequences: 1657284
Number of extensions: 6956145
Number of successful extensions: 14815
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 14548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14796
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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